RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 A0A1B0GW54 56 aa7.86□□□□□ -1.15
CXCR4-203ENST00000466288 Q6ZQT0 140 aa7.86□□□□□ -1.15
CXCR4-203ENST00000466288 SSBP3-AS1Q7Z2R9 100 aa7.86□□□□□ -1.15
CXCR4-203ENST00000466288 IGLV5-48A0A075B6I7 105 aa7.85□□□□□ -1.15
CXCR4-203ENST00000466288 TRBV7-4A0A0J9YYF1 115 aa7.85□□□□□ -1.15
CXCR4-203ENST00000466288 M0R2T5 61 aa7.85□□□□□ -1.15
CXCR4-203ENST00000466288 IGLV9-49A0A0B4J1Y8 123 aa7.84□□□□□ -1.15
CXCR4-203ENST00000466288 ATP5EP2Q5VTU8 51 aa7.84□□□□□ -1.15
CXCR4-203ENST00000466288 Q6JHZ5 121 aa7.82□□□□□ -1.16
CXCR4-203ENST00000466288 Q9BRP9 147 aa7.82□□□□□ -1.16
CXCR4-203ENST00000466288 UBL5Q9BZL1 73 aa7.81□□□□□ -1.16
CXCR4-203ENST00000466288 LINC00846Q9NV44 126 aa7.81□□□□□ -1.16
CXCR4-203ENST00000466288 ERC2-IT1O76042 136 aa7.79□□□□□ -1.16
CXCR4-203ENST00000466288 FCGBPQ9Y6R7 5405 aaPredicted RBP7.76□□□□□ -1.17
CXCR4-203ENST00000466288 C9orf92A6NGG3 77 aa7.75□□□□□ -1.17
CXCR4-203ENST00000466288 KRTAP4-8Q9BYQ9 185 aa7.75□□□□□ -1.17
CXCR4-203ENST00000466288 DEFB105AQ8NG35 78 aa7.75□□□□□ -1.17
CXCR4-203ENST00000466288 A0A1B0GV72 72 aa7.74□□□□□ -1.17
CXCR4-203ENST00000466288 F8WEM9 126 aa7.74□□□□□ -1.17
CXCR4-203ENST00000466288 SPRR1BP22528 89 aa7.74□□□□□ -1.17
CXCR4-203ENST00000466288 COX6B2Q6YFQ2 88 aa7.73□□□□□ -1.17
CXCR4-203ENST00000466288 CXCL6P80162 114 aa7.72□□□□□ -1.17
CXCR4-203ENST00000466288 C9orf153Q5TBE3 101 aa7.71□□□□□ -1.18
CXCR4-203ENST00000466288 ST20-AS1Q8NBB2 130 aa7.7□□□□□ -1.18
CXCR4-203ENST00000466288 Q6ZVQ6 151 aa7.69□□□□□ -1.18
CXCR4-203ENST00000466288 SMIM29Q86T20 159 aa7.68□□□□□ -1.18
CXCR4-203ENST00000466288 ANAPC13Q9BS18 74 aa7.68□□□□□ -1.18
CXCR4-203ENST00000466288 IGKV3D-7A0A0C4DH55 119 aa7.66□□□□□ -1.18
CXCR4-203ENST00000466288 HIST1H4AP62805 103 aaKnown RBP7.66□□□□□ -1.18
CXCR4-203ENST00000466288 LIMD2Q9BT23 127 aa7.66□□□□□ -1.18
CXCR4-203ENST00000466288 NREPQ16612 68 aa7.65□□□□□ -1.18
CXCR4-203ENST00000466288 SYNE2Q8WXH0 6885 aaKnown RBP7.65□□□□□ -1.19
CXCR4-203ENST00000466288 FAM236AA0A1B0GUQ0 79 aa7.64□□□□□ -1.19
CXCR4-203ENST00000466288 FAM236BA0A1B0GV22 79 aa7.64□□□□□ -1.19
CXCR4-203ENST00000466288 ATOX1O00244 68 aa7.64□□□□□ -1.19
CXCR4-203ENST00000466288 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
CXCR4-203ENST00000466288 HRCT1Q6UXD1 115 aa7.63□□□□□ -1.19
CXCR4-203ENST00000466288 A0A1W2PNM2 257 aa7.62□□□□□ -1.19
CXCR4-203ENST00000466288 MACF1Q9UPN3 7388 aaKnown RBP7.62□□□□□ -1.19
CXCR4-203ENST00000466288 IGFL1Q6UW32 110 aa7.6□□□□□ -1.19
CXCR4-203ENST00000466288 KRTAP9-8Q9BYQ0 159 aa7.6□□□□□ -1.19
CXCR4-203ENST00000466288 SMIM20Q8N5G0 67 aa7.58□□□□□ -1.2
CXCR4-203ENST00000466288 BPY2O14599 106 aa7.57□□□□□ -1.2
CXCR4-203ENST00000466288 UQCRQO14949 82 aa7.54□□□□□ -1.2
CXCR4-203ENST00000466288 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
CXCR4-203ENST00000466288 CD164Q04900 197 aa7.53□□□□□ -1.2
CXCR4-203ENST00000466288 C1orf195Q5TG92 126 aa7.53□□□□□ -1.2
CXCR4-203ENST00000466288 A0A087WVE0 104 aa7.52□□□□□ -1.21
CXCR4-203ENST00000466288 COX7CP15954 63 aa7.52□□□□□ -1.21
CXCR4-203ENST00000466288 Q5XG85 94 aa7.52□□□□□ -1.21
CXCR4-203ENST00000466288 SERP2Q8N6R1 65 aa7.52□□□□□ -1.21
CXCR4-203ENST00000466288 J3KT08 172 aa7.49□□□□□ -1.21
CXCR4-203ENST00000466288 IGKV4-1P06312 121 aa7.49□□□□□ -1.21
CXCR4-203ENST00000466288 SS18L2Q9UHA2 77 aa7.49□□□□□ -1.21
CXCR4-203ENST00000466288 A0A087WSZ3 146 aa7.48□□□□□ -1.21
CXCR4-203ENST00000466288 TRAV7A0A075B6U4 112 aa7.47□□□□□ -1.21
CXCR4-203ENST00000466288 CCDC179H3BU77 68 aa7.44□□□□□ -1.22
CXCR4-203ENST00000466288 DSCR10P59022 87 aa7.44□□□□□ -1.22
CXCR4-203ENST00000466288 KRTAP4-12Q9BQ66 201 aa7.44□□□□□ -1.22
CXCR4-203ENST00000466288 LCE3BQ5TA77 95 aa7.43□□□□□ -1.22
CXCR4-203ENST00000466288 LINC00472Q9H8W2 130 aa7.43□□□□□ -1.22
CXCR4-203ENST00000466288 MT2AP02795 61 aa7.42□□□□□ -1.22
CXCR4-203ENST00000466288 A0A0G2JQZ4 141 aa7.41□□□□□ -1.22
CXCR4-203ENST00000466288 A8MWP4 228 aa7.39□□□□□ -1.23
CXCR4-203ENST00000466288 NDUFB1O75438 58 aa7.38□□□□□ -1.23
CXCR4-203ENST00000466288 Q8N9L7 120 aa7.38□□□□□ -1.23
CXCR4-203ENST00000466288 HCG22E2RYF7 251 aa7.37□□□□□ -1.23
CXCR4-203ENST00000466288 K7EQZ3 153 aa7.37□□□□□ -1.23
CXCR4-203ENST00000466288 ATP11AUNQ6ZP68 121 aa7.37□□□□□ -1.23
CXCR4-203ENST00000466288 PRR15Q8IV56 129 aa7.37□□□□□ -1.23
CXCR4-203ENST00000466288 KRTAP9-3Q9BYQ3 159 aa7.37□□□□□ -1.23
CXCR4-203ENST00000466288 MT1FP04733 61 aa7.36□□□□□ -1.23
CXCR4-203ENST00000466288 Q75L30 129 aa7.36□□□□□ -1.23
CXCR4-203ENST00000466288 OCR1Q9BZK8 76 aa7.35□□□□□ -1.23
CXCR4-203ENST00000466288 NDUFC1O43677 76 aa7.33□□□□□ -1.24
CXCR4-203ENST00000466288 KLKP1Q107X0 134 aa7.33□□□□□ -1.24
CXCR4-203ENST00000466288 Q96NJ1 140 aa7.31□□□□□ -1.24
CXCR4-203ENST00000466288 TMEM258P61165 79 aa7.3□□□□□ -1.24
CXCR4-203ENST00000466288 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
CXCR4-203ENST00000466288 C5orf47Q569G3 176 aa7.29□□□□□ -1.24
CXCR4-203ENST00000466288 C20orf197Q8N268 126 aa7.29□□□□□ -1.24
CXCR4-203ENST00000466288 CASC2Q6XLA1 102 aa7.28□□□□□ -1.24
CXCR4-203ENST00000466288 KRTAP10-10P60014 251 aa7.27□□□□□ -1.25
CXCR4-203ENST00000466288 KRTAP19-6Q3LI70 58 aa7.27□□□□□ -1.25
CXCR4-203ENST00000466288 TMEM254Q8TBM7 123 aa7.26□□□□□ -1.25
CXCR4-203ENST00000466288 A0A1B0GVX0 72 aa7.25□□□□□ -1.25
CXCR4-203ENST00000466288 KRTAP6-3Q3LI67 103 aa7.25□□□□□ -1.25
CXCR4-203ENST00000466288 H3BPC8 53 aa7.24□□□□□ -1.25
CXCR4-203ENST00000466288 KRTAP9-9Q9BYP9 154 aa7.24□□□□□ -1.25
CXCR4-203ENST00000466288 KRTAP9-4Q9BYQ2 154 aa7.24□□□□□ -1.25
CXCR4-203ENST00000466288 TP53AIP1Q9HCN2 124 aa7.24□□□□□ -1.25
CXCR4-203ENST00000466288 MMP24-AS1A0A0U1RRL7 71 aa7.23□□□□□ -1.25
CXCR4-203ENST00000466288 hDV103S1A0JD37 113 aa7.23□□□□□ -1.25
CXCR4-203ENST00000466288 C8orf87E5RJ46 101 aa7.23□□□□□ -1.25
CXCR4-203ENST00000466288 WFDC13Q8IUB5 93 aa7.23□□□□□ -1.25
CXCR4-203ENST00000466288 NEBP20929 6669 aa7.22□□□□□ -1.25
CXCR4-203ENST00000466288 C8orf17Q9NRJ1 99 aa7.22□□□□□ -1.25
CXCR4-203ENST00000466288 ATP5EP56381 51 aaPredicted RBP7.21□□□□□ -1.26
CXCR4-203ENST00000466288 MP68P56378 58 aa7.2□□□□□ -1.26
CXCR4-203ENST00000466288 C20orf166-AS1Q96NR2 134 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms