RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 NDUFB1O75438 58 aa9.65□□□□□ -0.86
CPSF4-209ENST00000465132 Q96NJ1 140 aa9.65□□□□□ -0.86
CPSF4-209ENST00000465132 KRTAP13-3Q3SY46 172 aa9.64□□□□□ -0.87
CPSF4-209ENST00000465132 J3QR89 54 aa9.62□□□□□ -0.87
CPSF4-209ENST00000465132 FAM240AA0A1B0GVK7 77 aa9.6□□□□□ -0.87
CPSF4-209ENST00000465132 BPY2O14599 106 aa9.59□□□□□ -0.87
CPSF4-209ENST00000465132 DEFB116Q30KQ4 102 aa9.59□□□□□ -0.87
CPSF4-209ENST00000465132 Q6ZVQ6 151 aa9.58□□□□□ -0.88
CPSF4-209ENST00000465132 C9orf92A6NGG3 77 aa9.56□□□□□ -0.88
CPSF4-209ENST00000465132 A8MWP4 228 aa9.56□□□□□ -0.88
CPSF4-209ENST00000465132 C8orf87E5RJ46 101 aa9.56□□□□□ -0.88
CPSF4-209ENST00000465132 LINC00846Q9NV44 126 aa9.56□□□□□ -0.88
CPSF4-209ENST00000465132 A0A1B0GVX0 72 aa9.55□□□□□ -0.88
CPSF4-209ENST00000465132 LINC00313P59037 77 aa9.55□□□□□ -0.88
CPSF4-209ENST00000465132 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
CPSF4-209ENST00000465132 IGHV6-1A0A0B4J1U7 121 aa9.53□□□□□ -0.88
CPSF4-209ENST00000465132 SEC61BP60468 96 aaKnown RBP9.53□□□□□ -0.88
CPSF4-209ENST00000465132 XP32Q5T750 250 aa9.5□□□□□ -0.89
CPSF4-209ENST00000465132 PRR15Q8IV56 129 aa9.48□□□□□ -0.89
CPSF4-209ENST00000465132 CXCL6P80162 114 aa9.47□□□□□ -0.89
CPSF4-209ENST00000465132 DSCR10P59022 87 aa9.46□□□□□ -0.9
CPSF4-209ENST00000465132 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.9
CPSF4-209ENST00000465132 ATP5EP2Q5VTU8 51 aa9.46□□□□□ -0.9
CPSF4-209ENST00000465132 IGKV3D-7A0A0C4DH55 119 aa9.45□□□□□ -0.9
CPSF4-209ENST00000465132 K7ERU9 68 aa9.43□□□□□ -0.9
CPSF4-209ENST00000465132 Q75L30 129 aa9.42□□□□□ -0.9
CPSF4-209ENST00000465132 C8orf17Q9NRJ1 99 aa9.42□□□□□ -0.9
CPSF4-209ENST00000465132 K7EQZ3 153 aa9.41□□□□□ -0.9
CPSF4-209ENST00000465132 RPL37P61927 97 aaKnown RBP9.41□□□□□ -0.9
CPSF4-209ENST00000465132 ATP11AUNQ6ZP68 121 aa9.4□□□□□ -0.9
CPSF4-209ENST00000465132 LINC00643Q86TS7 51 aa9.39□□□□□ -0.91
CPSF4-209ENST00000465132 C20orf166-AS1Q96NR2 134 aa9.39□□□□□ -0.91
CPSF4-209ENST00000465132 A8MUU9 505 aa9.37□□□□□ -0.91
CPSF4-209ENST00000465132 LCE2CQ5TA81 110 aa9.37□□□□□ -0.91
CPSF4-209ENST00000465132 TMEM254Q8TBM7 123 aa9.36□□□□□ -0.91
CPSF4-209ENST00000465132 FSIP2Q5CZC0 6907 aa9.36□□□□□ -0.91
CPSF4-209ENST00000465132 hDV103S1A0JD37 113 aa9.35□□□□□ -0.91
CPSF4-209ENST00000465132 KRTAP16-1A8MUX0 517 aa9.34□□□□□ -0.91
CPSF4-209ENST00000465132 NOTCH2NLQ7Z3S9 236 aa9.34□□□□□ -0.91
CPSF4-209ENST00000465132 MMP24-AS1A0A0U1RRL7 71 aa9.33□□□□□ -0.92
CPSF4-209ENST00000465132 CRCT1Q9UGL9 99 aa9.33□□□□□ -0.92
CPSF4-209ENST00000465132 CASC2Q6XLA1 102 aa9.32□□□□□ -0.92
CPSF4-209ENST00000465132 Q8N9L7 120 aa9.32□□□□□ -0.92
CPSF4-209ENST00000465132 MRPL34Q9BQ48 92 aaKnown RBP9.32□□□□□ -0.92
CPSF4-209ENST00000465132 KRTAP19-2Q3LHN2 52 aa9.31□□□□□ -0.92
CPSF4-209ENST00000465132 HCG22E2RYF7 251 aa9.3□□□□□ -0.92
CPSF4-209ENST00000465132 Q8N9P0 234 aaPredicted RBP9.3□□□□□ -0.92
CPSF4-209ENST00000465132 PCOTHQ58A44 107 aa9.29□□□□□ -0.92
CPSF4-209ENST00000465132 HIST1H4AP62805 103 aaKnown RBP9.27□□□□□ -0.93
CPSF4-209ENST00000465132 NDUFS5O43920 106 aa9.26□□□□□ -0.93
CPSF4-209ENST00000465132 MT1HP80294 61 aa9.26□□□□□ -0.93
CPSF4-209ENST00000465132 WFDC13Q8IUB5 93 aa9.26□□□□□ -0.93
CPSF4-209ENST00000465132 ZCCHC13Q8WW36 166 aaKnown RBP9.2□□□□□ -0.94
CPSF4-209ENST00000465132 TP53AIP1Q9HCN2 124 aa9.2□□□□□ -0.94
CPSF4-209ENST00000465132 IMUPQ9GZP8 106 aa9.16□□□□□ -0.94
CPSF4-209ENST00000465132 LORP23490 312 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-209ENST00000465132 KRTAP10-6P60371 365 aaPredicted RBP9.13□□□□□ -0.95
CPSF4-209ENST00000465132 A0A087WVE0 104 aa9.07□□□□□ -0.96
CPSF4-209ENST00000465132 M0R2T5 61 aa9.06□□□□□ -0.96
CPSF4-209ENST00000465132 SCGB1A1P11684 91 aa9.04□□□□□ -0.96
CPSF4-209ENST00000465132 MT-ATP8P03928 68 aa9.03□□□□□ -0.96
CPSF4-209ENST00000465132 UQCRQO14949 82 aa9.02□□□□□ -0.97
CPSF4-209ENST00000465132 COX6B2Q6YFQ2 88 aa9.02□□□□□ -0.97
CPSF4-209ENST00000465132 FLGP20930 4061 aaPredicted RBP9.01□□□□□ -0.97
CPSF4-209ENST00000465132 SPINK7P58062 85 aa9.01□□□□□ -0.97
CPSF4-209ENST00000465132 C7orf65Q6ZTY9 151 aa8.99□□□□□ -0.97
CPSF4-209ENST00000465132 TRAV22A0A0B4J277 110 aa8.98□□□□□ -0.97
CPSF4-209ENST00000465132 ATOX1O00244 68 aa8.98□□□□□ -0.97
CPSF4-209ENST00000465132 RBM12B-AS1Q9P1G2 102 aa8.98□□□□□ -0.97
CPSF4-209ENST00000465132 Q5W150 140 aa8.97□□□□□ -0.97
CPSF4-209ENST00000465132 SMIM20Q8N5G0 67 aa8.96□□□□□ -0.98
CPSF4-209ENST00000465132 IGKV2D-30A0A075B6S6 120 aa8.95□□□□□ -0.98
CPSF4-209ENST00000465132 IGKV2-30P06310 120 aa8.95□□□□□ -0.98
CPSF4-209ENST00000465132 MP68P56378 58 aa8.92□□□□□ -0.98
CPSF4-209ENST00000465132 LOC101927531A0A1B0GV80 90 aa8.91□□□□□ -0.98
CPSF4-209ENST00000465132 C5orf47Q569G3 176 aa8.91□□□□□ -0.98
CPSF4-209ENST00000465132 FAM236AA0A1B0GUQ0 79 aa8.9□□□□□ -0.98
CPSF4-209ENST00000465132 FAM236BA0A1B0GV22 79 aa8.9□□□□□ -0.98
CPSF4-209ENST00000465132 OCR1Q9BZK8 76 aa8.9□□□□□ -0.98
CPSF4-209ENST00000465132 H0Y9P7 68 aa8.89□□□□□ -0.99
CPSF4-209ENST00000465132 FAM236DA0A1B0GTK5 79 aa8.88□□□□□ -0.99
CPSF4-209ENST00000465132 FAM236CP0DP71 79 aa8.88□□□□□ -0.99
CPSF4-209ENST00000465132 HRES1P13985 223 aa8.87□□□□□ -0.99
CPSF4-209ENST00000465132 H3BPC8 53 aa8.86□□□□□ -0.99
CPSF4-209ENST00000465132 MPLKIPQ8TAP9 179 aa8.83□□□□□ -1
CPSF4-209ENST00000465132 TRAV7A0A075B6U4 112 aa8.82□□□□□ -1
CPSF4-209ENST00000465132 C1orf64Q8NEQ6 169 aa8.81□□□□□ -1
CPSF4-209ENST00000465132 CYP4F30PQ9H0H9 118 aa8.8□□□□□ -1
CPSF4-209ENST00000465132 LINC00208Q96KT6 92 aa8.79□□□□□ -1
CPSF4-209ENST00000465132 USH2AO75445 5202 aa8.74□□□□□ -1.01
CPSF4-209ENST00000465132 KRTAP9-8Q9BYQ0 159 aa8.72□□□□□ -1.01
CPSF4-209ENST00000465132 SSPOA2VEC9 5147 aa8.71□□□□□ -1.01
CPSF4-209ENST00000465132 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-209ENST00000465132 SERP2Q8N6R1 65 aa8.71□□□□□ -1.02
CPSF4-209ENST00000465132 C4orf26Q17RF5 130 aa8.7□□□□□ -1.02
CPSF4-209ENST00000465132 KRTAP9-7A8MTY7 169 aa8.68□□□□□ -1.02
CPSF4-209ENST00000465132 H1FX-AS1Q4G0G2 97 aa8.68□□□□□ -1.02
CPSF4-209ENST00000465132 A8MUN3 132 aa8.6□□□□□ -1.03
CPSF4-209ENST00000465132 MT2AP02795 61 aa8.57□□□□□ -1.04
CPSF4-209ENST00000465132 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms