RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 TENM2Q9NT68 2774 aa4.18□□□□□ -1.74
CDKL5-203ENST00000463994 LCE2BO14633 110 aa4.18□□□□□ -1.74
CDKL5-203ENST00000463994 DEFB4AO15263 64 aa4.18□□□□□ -1.74
CDKL5-203ENST00000463994 LUZP6Q538Z0 58 aa4.18□□□□□ -1.74
CDKL5-203ENST00000463994 A0A087WTM6 91 aa4.17□□□□□ -1.74
CDKL5-203ENST00000463994 PRLHP81277 87 aa4.17□□□□□ -1.74
CDKL5-203ENST00000463994 SSBP3-AS1Q7Z2R9 100 aa4.17□□□□□ -1.74
CDKL5-203ENST00000463994 ACANP16112 2415 aa4.16□□□□□ -1.74
CDKL5-203ENST00000463994 K7ERS5 55 aa4.16□□□□□ -1.74
CDKL5-203ENST00000463994 HTN3P15516 51 aa4.16□□□□□ -1.74
CDKL5-203ENST00000463994 KRTAP10-3P60369 221 aa4.16□□□□□ -1.74
CDKL5-203ENST00000463994 KRTAP11-1Q8IUC1 163 aa4.16□□□□□ -1.74
CDKL5-203ENST00000463994 LY6G6CO95867 125 aa4.15□□□□□ -1.74
CDKL5-203ENST00000463994 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
CDKL5-203ENST00000463994 CRIPTQ9P021 101 aa4.15□□□□□ -1.75
CDKL5-203ENST00000463994 MTORP42345 2549 aa4.14□□□□□ -1.75
CDKL5-203ENST00000463994 NBEAL2Q6ZNJ1 2754 aa4.14□□□□□ -1.75
CDKL5-203ENST00000463994 SETD2Q9BYW2 2564 aaPredicted RBP4.13□□□□□ -1.75
CDKL5-203ENST00000463994 A0A096LNI7 61 aa4.13□□□□□ -1.75
CDKL5-203ENST00000463994 H0YAA0 97 aa4.13□□□□□ -1.75
CDKL5-203ENST00000463994 LCE2CQ5TA81 110 aa4.12□□□□□ -1.75
CDKL5-203ENST00000463994 CUBNO60494 3623 aa4.12□□□□□ -1.75
CDKL5-203ENST00000463994 PANO1I0J062 215 aa4.12□□□□□ -1.75
CDKL5-203ENST00000463994 ZNF469Q96JG9 3925 aaPredicted RBP4.12□□□□□ -1.75
CDKL5-203ENST00000463994 LINC01556Q5JQF7 62 aa4.11□□□□□ -1.75
CDKL5-203ENST00000463994 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.11□□□□□ -1.75
CDKL5-203ENST00000463994 Q6ZSA8 131 aa4.1□□□□□ -1.75
CDKL5-203ENST00000463994 LCE2AQ5TA79 106 aaPredicted RBP4.1□□□□□ -1.75
CDKL5-203ENST00000463994 PSORS1C2Q9UIG4 136 aa4.1□□□□□ -1.75
CDKL5-203ENST00000463994 SONP18583 2426 aaKnown RBP4.1□□□□□ -1.75
CDKL5-203ENST00000463994 FBN1P35555 2871 aaKnown RBP4.09□□□□□ -1.75
CDKL5-203ENST00000463994 IGKV2-30P06310 120 aa4.08□□□□□ -1.76
CDKL5-203ENST00000463994 FLG2Q5D862 2391 aaPredicted RBP4.07□□□□□ -1.76
CDKL5-203ENST00000463994 NIPBLQ6KC79 2804 aaeCLIP4.07□□□□□ -1.76
CDKL5-203ENST00000463994 A0A1B0GU33 70 aa4.05□□□□□ -1.76
CDKL5-203ENST00000463994 COL6A5A8TX70 2615 aa4.05□□□□□ -1.76
CDKL5-203ENST00000463994 ANAPC11Q9NYG5 84 aa4.04□□□□□ -1.76
CDKL5-203ENST00000463994 ATRQ13535 2644 aa4.03□□□□□ -1.76
CDKL5-203ENST00000463994 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
CDKL5-203ENST00000463994 NBDYA0A0U1RRE5 68 aa4.02□□□□□ -1.77
CDKL5-203ENST00000463994 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
CDKL5-203ENST00000463994 CIRBP-AS1Q8TBR5 109 aa4.02□□□□□ -1.77
CDKL5-203ENST00000463994 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
CDKL5-203ENST00000463994 SPINK1P00995 79 aa4.02□□□□□ -1.77
CDKL5-203ENST00000463994 TPRXLQ17RH7 258 aa4.01□□□□□ -1.77
CDKL5-203ENST00000463994 H1FX-AS1Q4G0G2 97 aa4.01□□□□□ -1.77
CDKL5-203ENST00000463994 SRRM2Q9UQ35 2752 aaKnown RBP4□□□□□ -1.77
CDKL5-203ENST00000463994 STAB1Q9NY15 2570 aa4□□□□□ -1.77
CDKL5-203ENST00000463994 CMYA5Q8N3K9 4069 aa3.98□□□□□ -1.77
CDKL5-203ENST00000463994 SPINK6Q6UWN8 80 aa3.98□□□□□ -1.77
CDKL5-203ENST00000463994 KRTAP10-11P60412 298 aa3.97□□□□□ -1.77
CDKL5-203ENST00000463994 DNAH3Q8TD57 4116 aa3.97□□□□□ -1.77
CDKL5-203ENST00000463994 C14orf177Q52M58 125 aa3.96□□□□□ -1.78
CDKL5-203ENST00000463994 TYMSOSQ8TAI1 123 aa3.95□□□□□ -1.78
CDKL5-203ENST00000463994 KRTAP13-1Q8IUC0 172 aa3.95□□□□□ -1.78
CDKL5-203ENST00000463994 CSMD3Q7Z407 3707 aa3.94□□□□□ -1.78
CDKL5-203ENST00000463994 VWFP04275 2813 aa3.92□□□□□ -1.78
CDKL5-203ENST00000463994 MEGF8Q7Z7M0 2845 aa3.92□□□□□ -1.78
CDKL5-203ENST00000463994 C10orf95Q9H7T3 257 aa3.91□□□□□ -1.78
CDKL5-203ENST00000463994 DYNC2H1Q8NCM8 4307 aaKnown RBP3.9□□□□□ -1.79
CDKL5-203ENST00000463994 RPL37P61927 97 aaKnown RBP3.9□□□□□ -1.79
CDKL5-203ENST00000463994 TRRAPQ9Y4A5 3859 aa3.9□□□□□ -1.79
CDKL5-203ENST00000463994 Q8N1X5 172 aa3.9□□□□□ -1.79
CDKL5-203ENST00000463994 NBEAL1Q6ZS30 2694 aa3.87□□□□□ -1.79
CDKL5-203ENST00000463994 COX6B2Q6YFQ2 88 aa3.87□□□□□ -1.79
CDKL5-203ENST00000463994 PRKDCP78527 4128 aaKnown RBP3.87□□□□□ -1.79
CDKL5-203ENST00000463994 MGAM2Q2M2H8 2515 aa3.87□□□□□ -1.79
CDKL5-203ENST00000463994 TENM1Q9UKZ4 2725 aa3.86□□□□□ -1.79
CDKL5-203ENST00000463994 DNAH9Q9NYC9 4486 aa3.85□□□□□ -1.79
CDKL5-203ENST00000463994 KRTAP1-5Q9BYS1 174 aa3.85□□□□□ -1.79
CDKL5-203ENST00000463994 LORP23490 312 aaPredicted RBP3.84□□□□□ -1.8
CDKL5-203ENST00000463994 CAMK2N1Q7Z7J9 78 aa3.82□□□□□ -1.8
CDKL5-203ENST00000463994 TENM3Q9P273 2699 aa3.82□□□□□ -1.8
CDKL5-203ENST00000463994 DNAH1Q9P2D7 4330 aa3.81□□□□□ -1.8
CDKL5-203ENST00000463994 UBE2DNLQ8IWF7 75 aa3.81□□□□□ -1.8
CDKL5-203ENST00000463994 PKD1L1Q8TDX9 2849 aa3.81□□□□□ -1.8
CDKL5-203ENST00000463994 SPACA4Q8TDM5 124 aa3.79□□□□□ -1.8
CDKL5-203ENST00000463994 APLNQ9ULZ1 77 aa3.79□□□□□ -1.8
CDKL5-203ENST00000463994 DNAH6Q9C0G6 4158 aa3.77□□□□□ -1.81
CDKL5-203ENST00000463994 DNAH7Q8WXX0 4024 aa3.76□□□□□ -1.81
CDKL5-203ENST00000463994 HUWE1Q7Z6Z7 4374 aaKnown RBP3.76□□□□□ -1.81
CDKL5-203ENST00000463994 COL7A1Q02388 2944 aa3.76□□□□□ -1.81
CDKL5-203ENST00000463994 Q6ZRN7 208 aaPredicted RBP3.76□□□□□ -1.81
CDKL5-203ENST00000463994 BIRC6Q9NR09 4857 aa3.76□□□□□ -1.81
CDKL5-203ENST00000463994 A0A0D9SG42 100 aa3.75□□□□□ -1.81
CDKL5-203ENST00000463994 RYR2Q92736 4967 aa3.75□□□□□ -1.81
CDKL5-203ENST00000463994 XP32Q5T750 250 aa3.73□□□□□ -1.81
CDKL5-203ENST00000463994 PLAC4Q8WY50 150 aa3.72□□□□□ -1.81
CDKL5-203ENST00000463994 KRTAP3-1Q9BYR8 98 aa3.72□□□□□ -1.81
CDKL5-203ENST00000463994 S4R3F8 94 aa3.72□□□□□ -1.81
CDKL5-203ENST00000463994 SACSQ9NZJ4 4579 aa3.7□□□□□ -1.82
CDKL5-203ENST00000463994 NOTCH1P46531 2555 aa3.7□□□□□ -1.82
CDKL5-203ENST00000463994 FRAS1Q86XX4 4008 aa3.7□□□□□ -1.82
CDKL5-203ENST00000463994 KRTAP13-4Q3LI77 160 aa3.7□□□□□ -1.82
CDKL5-203ENST00000463994 TGP01266 2768 aa3.69□□□□□ -1.82
CDKL5-203ENST00000463994 KRTAP10-6P60371 365 aaPredicted RBP3.68□□□□□ -1.82
CDKL5-203ENST00000463994 RYR3Q15413 4870 aa3.68□□□□□ -1.82
CDKL5-203ENST00000463994 LYSTQ99698 3801 aa3.67□□□□□ -1.82
CDKL5-203ENST00000463994 PLECQ15149 4684 aaKnown RBP3.67□□□□□ -1.82
CDKL5-203ENST00000463994 DNAH10Q8IVF4 4471 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms