RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 NBEAL2Q6ZNJ1 2754 aa2.24□□□□□ -2.05
COL8A1-205ENST00000463753 A0A1B0GUV1 79 aa2.24□□□□□ -2.05
COL8A1-205ENST00000463753 P0C880 135 aa2.24□□□□□ -2.05
COL8A1-205ENST00000463753 A0A1B0GW54 56 aa2.24□□□□□ -2.05
COL8A1-205ENST00000463753 K7EIL1 84 aa2.24□□□□□ -2.05
COL8A1-205ENST00000463753 COL6A5A8TX70 2615 aa2.24□□□□□ -2.05
COL8A1-205ENST00000463753 HIVEP2P31629 2446 aa2.23□□□□□ -2.05
COL8A1-205ENST00000463753 A8MWP4 228 aa2.23□□□□□ -2.05
COL8A1-205ENST00000463753 C16orf74Q96GX8 76 aa2.23□□□□□ -2.05
COL8A1-205ENST00000463753 CRIPTQ9P021 101 aa2.23□□□□□ -2.05
COL8A1-205ENST00000463753 ATRQ13535 2644 aa2.23□□□□□ -2.05
COL8A1-205ENST00000463753 HRNRQ86YZ3 2850 aaPredicted RBP2.23□□□□□ -2.05
COL8A1-205ENST00000463753 VPS13BQ7Z7G8 4022 aa2.23□□□□□ -2.05
COL8A1-205ENST00000463753 DNAH10OSP0CZ25 163 aa2.23□□□□□ -2.05
COL8A1-205ENST00000463753 SPATA8Q6RVD6 105 aa2.23□□□□□ -2.05
COL8A1-205ENST00000463753 DNAH10Q8IVF4 4471 aa2.23□□□□□ -2.05
COL8A1-205ENST00000463753 UQCR11O14957 56 aa2.22□□□□□ -2.05
COL8A1-205ENST00000463753 UTP20O75691 2785 aaKnown RBP2.22□□□□□ -2.05
COL8A1-205ENST00000463753 ZNF861PO60384 105 aa2.22□□□□□ -2.05
COL8A1-205ENST00000463753 MSMBP08118 114 aa2.22□□□□□ -2.05
COL8A1-205ENST00000463753 CMC4P56277 68 aaPredicted RBP2.22□□□□□ -2.05
COL8A1-205ENST00000463753 IGFL1Q6UW32 110 aa2.22□□□□□ -2.05
COL8A1-205ENST00000463753 DHRS4-AS1Q9P1J3 65 aa2.22□□□□□ -2.05
COL8A1-205ENST00000463753 SONP18583 2426 aaKnown RBP2.22□□□□□ -2.05
COL8A1-205ENST00000463753 LYSTQ99698 3801 aa2.22□□□□□ -2.05
COL8A1-205ENST00000463753 DNAH2Q9P225 4427 aa2.22□□□□□ -2.05
COL8A1-205ENST00000463753 IGKV2-24A0A0C4DH68 120 aa2.22□□□□□ -2.05
COL8A1-205ENST00000463753 KRTAP25-1Q3LHN0 102 aa2.22□□□□□ -2.05
COL8A1-205ENST00000463753 DNAH11Q96DT5 4516 aa2.21□□□□□ -2.05
COL8A1-205ENST00000463753 TLN2Q9Y4G6 2542 aa2.21□□□□□ -2.06
COL8A1-205ENST00000463753 NIPBLQ6KC79 2804 aaeCLIP2.21□□□□□ -2.06
COL8A1-205ENST00000463753 CSMD3Q7Z407 3707 aa2.21□□□□□ -2.06
COL8A1-205ENST00000463753 NDUFAF8A1L188 74 aa2.21□□□□□ -2.06
COL8A1-205ENST00000463753 Q6ZRX8 168 aa2.21□□□□□ -2.06
COL8A1-205ENST00000463753 PKD1L1Q8TDX9 2849 aa2.21□□□□□ -2.06
COL8A1-205ENST00000463753 A0A096LNI7 61 aa2.21□□□□□ -2.06
COL8A1-205ENST00000463753 TRRAPQ9Y4A5 3859 aa2.21□□□□□ -2.06
COL8A1-205ENST00000463753 GVQW2A0A096LPI5 108 aaPredicted RBP2.2□□□□□ -2.06
COL8A1-205ENST00000463753 KRTAP16-1A8MUX0 517 aa2.2□□□□□ -2.06
COL8A1-205ENST00000463753 DEFB4AO15263 64 aa2.2□□□□□ -2.06
COL8A1-205ENST00000463753 HTN3P15516 51 aa2.2□□□□□ -2.06
COL8A1-205ENST00000463753 RYR1P21817 5038 aa2.2□□□□□ -2.06
COL8A1-205ENST00000463753 A8MUU9 505 aa2.2□□□□□ -2.06
COL8A1-205ENST00000463753 A0A087X002 238 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 NUPR2A6NF83 97 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 SPINT4Q6UDR6 99 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 PRO0255Q9UI72 69 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
COL8A1-205ENST00000463753 PKHD1L1Q86WI1 4243 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 MMP24-AS1A0A0U1RRL7 71 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 FAM168BA1KXE4 195 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 GIG44P09565 113 aaPredicted RBP2.19□□□□□ -2.06
COL8A1-205ENST00000463753 CSNK1G2-AS1Q8NCQ2 148 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 DEFB131BA0A096LNP1 70 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 IGLV5-52A0A0A0MRZ9 124 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 ACYP2P14621 99 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 LINC00483Q53H64 154 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 TENM1Q9UKZ4 2725 aa2.19□□□□□ -2.06
COL8A1-205ENST00000463753 MGAM2Q2M2H8 2515 aa2.18□□□□□ -2.06
COL8A1-205ENST00000463753 FLNAP21333 2647 aaKnown RBP2.18□□□□□ -2.06
COL8A1-205ENST00000463753 SSBP3-AS1Q7Z2R9 100 aa2.18□□□□□ -2.06
COL8A1-205ENST00000463753 FLG2Q5D862 2391 aaPredicted RBP2.18□□□□□ -2.06
COL8A1-205ENST00000463753 NBEAL1Q6ZS30 2694 aa2.17□□□□□ -2.06
COL8A1-205ENST00000463753 TP53AIP1Q9HCN2 124 aa2.17□□□□□ -2.06
COL8A1-205ENST00000463753 PRLHP81277 87 aa2.17□□□□□ -2.06
COL8A1-205ENST00000463753 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
COL8A1-205ENST00000463753 PRR34Q9NV39 138 aa2.16□□□□□ -2.06
COL8A1-205ENST00000463753 STAB1Q9NY15 2570 aa2.16□□□□□ -2.06
COL8A1-205ENST00000463753 PLECQ15149 4684 aaKnown RBP2.16□□□□□ -2.06
COL8A1-205ENST00000463753 C20orf166-AS1Q96NR2 134 aa2.16□□□□□ -2.06
COL8A1-205ENST00000463753 LINC00472Q9H8W2 130 aa2.16□□□□□ -2.06
COL8A1-205ENST00000463753 CRCT1Q9UGL9 99 aa2.15□□□□□ -2.07
COL8A1-205ENST00000463753 ACANP16112 2415 aa2.15□□□□□ -2.07
COL8A1-205ENST00000463753 ABCA13Q86UQ4 5058 aa2.15□□□□□ -2.07
COL8A1-205ENST00000463753 KRTAP4-16G5E9R7 235 aaPredicted RBP2.15□□□□□ -2.07
COL8A1-205ENST00000463753 LELP1Q5T871 98 aa2.15□□□□□ -2.07
COL8A1-205ENST00000463753 C15orf56Q8N910 161 aa2.15□□□□□ -2.07
COL8A1-205ENST00000463753 LINC00304Q8N9R0 145 aa2.15□□□□□ -2.07
COL8A1-205ENST00000463753 MAPK1IP1LQ8NDC0 245 aa2.15□□□□□ -2.07
COL8A1-205ENST00000463753 C4orf3Q8WVX3 66 aa2.15□□□□□ -2.07
COL8A1-205ENST00000463753 ZANQ9Y493 2812 aa2.14□□□□□ -2.07
COL8A1-205ENST00000463753 C8orf17Q9NRJ1 99 aa2.14□□□□□ -2.07
COL8A1-205ENST00000463753 SPINK1P00995 79 aa2.14□□□□□ -2.07
COL8A1-205ENST00000463753 LUZP6Q538Z0 58 aa2.14□□□□□ -2.07
COL8A1-205ENST00000463753 DMAC1Q96GE9 116 aa2.14□□□□□ -2.07
COL8A1-205ENST00000463753 SRRM2Q9UQ35 2752 aaKnown RBP2.14□□□□□ -2.07
COL8A1-205ENST00000463753 KRTAP10-3P60369 221 aa2.13□□□□□ -2.07
COL8A1-205ENST00000463753 KRTAP26-1Q6PEX3 210 aa2.13□□□□□ -2.07
COL8A1-205ENST00000463753 HERC1Q15751 4861 aa2.13□□□□□ -2.07
COL8A1-205ENST00000463753 IGLV7-43P04211 117 aa2.13□□□□□ -2.07
COL8A1-205ENST00000463753 SPRR1AP35321 89 aa2.13□□□□□ -2.07
COL8A1-205ENST00000463753 MRPL34Q9BQ48 92 aaKnown RBP2.13□□□□□ -2.07
COL8A1-205ENST00000463753 CENPEQ02224 2701 aa2.13□□□□□ -2.07
COL8A1-205ENST00000463753 Q5W150 140 aa2.12□□□□□ -2.07
COL8A1-205ENST00000463753 VPS13DQ5THJ4 4388 aa2.12□□□□□ -2.07
COL8A1-205ENST00000463753 TNXBP22105 4242 aa2.12□□□□□ -2.07
COL8A1-205ENST00000463753 TLX1NBP0CAT3 122 aa2.12□□□□□ -2.07
COL8A1-205ENST00000463753 DEFB135Q30KP9 77 aa2.12□□□□□ -2.07
COL8A1-205ENST00000463753 NOTCH2NLQ7Z3S9 236 aa2.12□□□□□ -2.07
COL8A1-205ENST00000463753 TENM2Q9NT68 2774 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms