RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 WFDC13Q8IUB5 93 aa3.49□□□□□ -1.85
SMC3-202ENST00000462899 LINC00472Q9H8W2 130 aa3.49□□□□□ -1.85
SMC3-202ENST00000462899 NDUFV3P56181 108 aaKnown RBP3.48□□□□□ -1.85
SMC3-202ENST00000462899 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
SMC3-202ENST00000462899 C3orf79P0CE67 100 aa3.47□□□□□ -1.85
SMC3-202ENST00000462899 NDUFA5Q16718 116 aa3.47□□□□□ -1.85
SMC3-202ENST00000462899 BVES-AS1Q5T3Y7 98 aa3.47□□□□□ -1.85
SMC3-202ENST00000462899 IGHV6-1A0A0B4J1U7 121 aa3.46□□□□□ -1.86
SMC3-202ENST00000462899 Q5VV11 94 aa3.46□□□□□ -1.86
SMC3-202ENST00000462899 DEFB116Q30KQ4 102 aa3.45□□□□□ -1.86
SMC3-202ENST00000462899 RAB37Q96AX2 223 aa3.45□□□□□ -1.86
SMC3-202ENST00000462899 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
SMC3-202ENST00000462899 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
SMC3-202ENST00000462899 TRBV7-4A0A0J9YYF1 115 aa3.44□□□□□ -1.86
SMC3-202ENST00000462899 C8orf87E5RJ46 101 aa3.44□□□□□ -1.86
SMC3-202ENST00000462899 H3BMG7 143 aa3.44□□□□□ -1.86
SMC3-202ENST00000462899 SPRR2EP22531 72 aa3.44□□□□□ -1.86
SMC3-202ENST00000462899 SPRR2BP35325 72 aa3.44□□□□□ -1.86
SMC3-202ENST00000462899 SPRR2AP35326 72 aa3.44□□□□□ -1.86
SMC3-202ENST00000462899 UBE2V1Q13404 147 aa3.44□□□□□ -1.86
SMC3-202ENST00000462899 H1FX-AS1Q4G0G2 97 aa3.44□□□□□ -1.86
SMC3-202ENST00000462899 A0A1B0GVX0 72 aa3.43□□□□□ -1.86
SMC3-202ENST00000462899 C12orf57Q99622 126 aa3.43□□□□□ -1.86
SMC3-202ENST00000462899 HIST1H2BKO60814 126 aa3.42□□□□□ -1.86
SMC3-202ENST00000462899 HIST1H2BJP06899 126 aa3.42□□□□□ -1.86
SMC3-202ENST00000462899 HIST1H2BOP23527 126 aa3.42□□□□□ -1.86
SMC3-202ENST00000462899 HIST1H2BBP33778 126 aa3.42□□□□□ -1.86
SMC3-202ENST00000462899 HIST1H2BDP58876 126 aa3.42□□□□□ -1.86
SMC3-202ENST00000462899 HIST1H2BCP62807 126 aa3.42□□□□□ -1.86
SMC3-202ENST00000462899 HIST2H2BEQ16778 126 aa3.42□□□□□ -1.86
SMC3-202ENST00000462899 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.42□□□□□ -1.86
SMC3-202ENST00000462899 HIST1H2BHQ93079 126 aa3.42□□□□□ -1.86
SMC3-202ENST00000462899 SPRR2FQ96RM1 72 aa3.42□□□□□ -1.86
SMC3-202ENST00000462899 HIST1H2BNQ99877 126 aa3.42□□□□□ -1.86
SMC3-202ENST00000462899 HIST1H2BMQ99879 126 aa3.42□□□□□ -1.86
SMC3-202ENST00000462899 ATOH7Q8N100 152 aa3.41□□□□□ -1.86
SMC3-202ENST00000462899 KRTDAPP60985 99 aa3.39□□□□□ -1.87
SMC3-202ENST00000462899 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
SMC3-202ENST00000462899 A0A1B0GX51 115 aa3.37□□□□□ -1.87
SMC3-202ENST00000462899 H0YGX0 51 aa3.37□□□□□ -1.87
SMC3-202ENST00000462899 COA6Q5JTJ3 125 aaKnown RBP3.37□□□□□ -1.87
SMC3-202ENST00000462899 FABP2P12104 132 aa3.36□□□□□ -1.87
SMC3-202ENST00000462899 ANKRD29Q8N6D5 301 aa3.36□□□□□ -1.87
SMC3-202ENST00000462899 SNCGO76070 127 aa3.35□□□□□ -1.87
SMC3-202ENST00000462899 CCKP06307 115 aa3.35□□□□□ -1.87
SMC3-202ENST00000462899 SNRPEP62304 92 aaKnown RBP3.35□□□□□ -1.87
SMC3-202ENST00000462899 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
SMC3-202ENST00000462899 IGKV3D-7A0A0C4DH55 119 aa3.34□□□□□ -1.87
SMC3-202ENST00000462899 TRACP01848 142 aa3.34□□□□□ -1.87
SMC3-202ENST00000462899 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
SMC3-202ENST00000462899 SPRR2DP22532 72 aa3.33□□□□□ -1.88
SMC3-202ENST00000462899 A0A0B4J2C4 111 aa3.32□□□□□ -1.88
SMC3-202ENST00000462899 FAM236AA0A1B0GUQ0 79 aa3.32□□□□□ -1.88
SMC3-202ENST00000462899 FAM236BA0A1B0GV22 79 aa3.32□□□□□ -1.88
SMC3-202ENST00000462899 A0A1B0GV72 72 aa3.32□□□□□ -1.88
SMC3-202ENST00000462899 C8orf17Q9NRJ1 99 aa3.32□□□□□ -1.88
SMC3-202ENST00000462899 J3KT08 172 aa3.31□□□□□ -1.88
SMC3-202ENST00000462899 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
SMC3-202ENST00000462899 DSCR8Q96T75 97 aa3.31□□□□□ -1.88
SMC3-202ENST00000462899 HIST1H4GQ99525 98 aa3.31□□□□□ -1.88
SMC3-202ENST00000462899 KLKP1Q107X0 134 aa3.29□□□□□ -1.88
SMC3-202ENST00000462899 C5orf47Q569G3 176 aa3.29□□□□□ -1.88
SMC3-202ENST00000462899 Q6ZVQ6 151 aa3.29□□□□□ -1.88
SMC3-202ENST00000462899 ORMDL1Q9P0S3 153 aa3.29□□□□□ -1.88
SMC3-202ENST00000462899 LYRM7Q5U5X0 104 aa3.28□□□□□ -1.88
SMC3-202ENST00000462899 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
SMC3-202ENST00000462899 H3BQ85 93 aa3.27□□□□□ -1.89
SMC3-202ENST00000462899 TMEM256-PLSCR3K7ERE1 68 aa3.27□□□□□ -1.89
SMC3-202ENST00000462899 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
SMC3-202ENST00000462899 Q6ZQT0 140 aa3.27□□□□□ -1.89
SMC3-202ENST00000462899 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
SMC3-202ENST00000462899 NDUFB1O75438 58 aa3.26□□□□□ -1.89
SMC3-202ENST00000462899 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
SMC3-202ENST00000462899 MT1XP80297 61 aa3.26□□□□□ -1.89
SMC3-202ENST00000462899 C2orf91Q6ZV80 131 aa3.26□□□□□ -1.89
SMC3-202ENST00000462899 IMUPQ9GZP8 106 aa3.26□□□□□ -1.89
SMC3-202ENST00000462899 MMP24-AS1A0A0U1RRL7 71 aa3.25□□□□□ -1.89
SMC3-202ENST00000462899 DLEU1O43261 78 aa3.25□□□□□ -1.89
SMC3-202ENST00000462899 COX8AP10176 69 aa3.25□□□□□ -1.89
SMC3-202ENST00000462899 C7orf65Q6ZTY9 151 aa3.25□□□□□ -1.89
SMC3-202ENST00000462899 HSBP1L1C9JCN9 74 aa3.24□□□□□ -1.89
SMC3-202ENST00000462899 DNAL4O96015 105 aa3.24□□□□□ -1.89
SMC3-202ENST00000462899 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
SMC3-202ENST00000462899 C4orf26Q17RF5 130 aa3.24□□□□□ -1.89
SMC3-202ENST00000462899 Q5W150 140 aa3.24□□□□□ -1.89
SMC3-202ENST00000462899 TMEM254Q8TBM7 123 aa3.24□□□□□ -1.89
SMC3-202ENST00000462899 MRPL34Q9BQ48 92 aaKnown RBP3.24□□□□□ -1.89
SMC3-202ENST00000462899 VPS25Q9BRG1 176 aa3.24□□□□□ -1.89
SMC3-202ENST00000462899 LCA10Q71F78 164 aa3.23□□□□□ -1.89
SMC3-202ENST00000462899 PRR15Q8IV56 129 aa3.23□□□□□ -1.89
SMC3-202ENST00000462899 HIGD1BQ9P298 99 aa3.23□□□□□ -1.89
SMC3-202ENST00000462899 PRO1854Q9UHT4 67 aa3.23□□□□□ -1.89
SMC3-202ENST00000462899 RBM3P98179 157 aaKnown RBP3.22□□□□□ -1.89
SMC3-202ENST00000462899 CSAG1Q6PB30 78 aa3.22□□□□□ -1.89
SMC3-202ENST00000462899 HIST1H2BLQ99880 126 aa3.22□□□□□ -1.89
SMC3-202ENST00000462899 S4R3F8 94 aa3.22□□□□□ -1.89
SMC3-202ENST00000462899 CEND1Q8N111 149 aa3.21□□□□□ -1.9
SMC3-202ENST00000462899 CRIPTQ9P021 101 aa3.21□□□□□ -1.9
SMC3-202ENST00000462899 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
SMC3-202ENST00000462899 FXYD2P54710 66 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms