RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 NAA38Q9BRA0 125 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-210ENST00000462553 TMEM256-PLSCR3K7ERE1 68 aa4.19□□□□□ -1.74
CDC42BPA-210ENST00000462553 SS18L2Q9UHA2 77 aa4.19□□□□□ -1.74
CDC42BPA-210ENST00000462553 TRBV7-4A0A0J9YYF1 115 aa4.18□□□□□ -1.74
CDC42BPA-210ENST00000462553 C9orf118A6NHY6 69 aa4.18□□□□□ -1.74
CDC42BPA-210ENST00000462553 SCGB1C2P0DMR2 95 aa4.18□□□□□ -1.74
CDC42BPA-210ENST00000462553 TSTD3H0UI37 97 aa4.17□□□□□ -1.74
CDC42BPA-210ENST00000462553 M0R2T5 61 aa4.17□□□□□ -1.74
CDC42BPA-210ENST00000462553 ANKRD29Q8N6D5 301 aa4.17□□□□□ -1.74
CDC42BPA-210ENST00000462553 OBSCN-AS1Q96MR7 158 aa4.16□□□□□ -1.74
CDC42BPA-210ENST00000462553 CCKP06307 115 aa4.15□□□□□ -1.75
CDC42BPA-210ENST00000462553 BAALC-AS2P0C853 105 aa4.15□□□□□ -1.75
CDC42BPA-210ENST00000462553 COX6B2Q6YFQ2 88 aa4.15□□□□□ -1.75
CDC42BPA-210ENST00000462553 Q75L30 129 aa4.15□□□□□ -1.75
CDC42BPA-210ENST00000462553 ATXN8Q156A1 80 aa4.14□□□□□ -1.75
CDC42BPA-210ENST00000462553 BATFQ16520 125 aa4.14□□□□□ -1.75
CDC42BPA-210ENST00000462553 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-210ENST00000462553 TAX1BP3O14907 124 aa4.13□□□□□ -1.75
CDC42BPA-210ENST00000462553 RBM3P98179 157 aaKnown RBP4.13□□□□□ -1.75
CDC42BPA-210ENST00000462553 C20orf166-AS1Q96NR2 134 aa4.13□□□□□ -1.75
CDC42BPA-210ENST00000462553 SIGMAR1Q99720 223 aa4.13□□□□□ -1.75
CDC42BPA-210ENST00000462553 LINC00472Q9H8W2 130 aa4.13□□□□□ -1.75
CDC42BPA-210ENST00000462553 A8MUU9 505 aa4.12□□□□□ -1.75
CDC42BPA-210ENST00000462553 DSCR10P59022 87 aa4.12□□□□□ -1.75
CDC42BPA-210ENST00000462553 KRTAP16-1A8MUX0 517 aa4.11□□□□□ -1.75
CDC42BPA-210ENST00000462553 IGKV4-1P06312 121 aa4.11□□□□□ -1.75
CDC42BPA-210ENST00000462553 DEFB116Q30KQ4 102 aa4.11□□□□□ -1.75
CDC42BPA-210ENST00000462553 NOTCH2NLQ7Z3S9 236 aa4.11□□□□□ -1.75
CDC42BPA-210ENST00000462553 DSCR8Q96T75 97 aa4.11□□□□□ -1.75
CDC42BPA-210ENST00000462553 LYRM7Q5U5X0 104 aa4.1□□□□□ -1.75
CDC42BPA-210ENST00000462553 Q6ZQT0 140 aa4.1□□□□□ -1.75
CDC42BPA-210ENST00000462553 VPS25Q9BRG1 176 aa4.1□□□□□ -1.75
CDC42BPA-210ENST00000462553 TRBV20-1A0A075B6N2 111 aa4.09□□□□□ -1.75
CDC42BPA-210ENST00000462553 LOC110117498A0A087WWA1 95 aa4.09□□□□□ -1.75
CDC42BPA-210ENST00000462553 A0A1W2PPM0 123 aa4.09□□□□□ -1.75
CDC42BPA-210ENST00000462553 C9JAW5 83 aa4.09□□□□□ -1.75
CDC42BPA-210ENST00000462553 JMJD7-PLA2G4BH0Y9G9 81 aa4.08□□□□□ -1.76
CDC42BPA-210ENST00000462553 MTURNQ8N3F0 131 aa4.08□□□□□ -1.76
CDC42BPA-210ENST00000462553 LINC00313P59037 77 aa4.07□□□□□ -1.76
CDC42BPA-210ENST00000462553 C14orf132Q9NPU4 83 aa4.07□□□□□ -1.76
CDC42BPA-210ENST00000462553 A0A1B0GVX0 72 aa4.06□□□□□ -1.76
CDC42BPA-210ENST00000462553 H3BT86 120 aa4.06□□□□□ -1.76
CDC42BPA-210ENST00000462553 ATP11AUNQ6ZP68 121 aa4.06□□□□□ -1.76
CDC42BPA-210ENST00000462553 IGHV6-1A0A0B4J1U7 121 aa4.05□□□□□ -1.76
CDC42BPA-210ENST00000462553 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
CDC42BPA-210ENST00000462553 A0A1B0GW54 56 aa4.04□□□□□ -1.76
CDC42BPA-210ENST00000462553 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
CDC42BPA-210ENST00000462553 PDE6GP18545 87 aa4.04□□□□□ -1.76
CDC42BPA-210ENST00000462553 C21orf62-AS1Q17RA5 79 aa4.04□□□□□ -1.76
CDC42BPA-210ENST00000462553 J3KT08 172 aa4.03□□□□□ -1.76
CDC42BPA-210ENST00000462553 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-210ENST00000462553 SPCS1Q9Y6A9 102 aa4.02□□□□□ -1.77
CDC42BPA-210ENST00000462553 IGKV3D-7A0A0C4DH55 119 aa4.01□□□□□ -1.77
CDC42BPA-210ENST00000462553 MT2AP02795 61 aa4.01□□□□□ -1.77
CDC42BPA-210ENST00000462553 COL5A1-AS1Q5SY13 56 aa4.01□□□□□ -1.77
CDC42BPA-210ENST00000462553 PRO0461Q9UI25 63 aa4.01□□□□□ -1.77
CDC42BPA-210ENST00000462553 A8MWP4 228 aa4□□□□□ -1.77
CDC42BPA-210ENST00000462553 MT1FP04733 61 aa3.99□□□□□ -1.77
CDC42BPA-210ENST00000462553 Q8N9P0 234 aaPredicted RBP3.99□□□□□ -1.77
CDC42BPA-210ENST00000462553 C8orf17Q9NRJ1 99 aa3.99□□□□□ -1.77
CDC42BPA-210ENST00000462553 K7EP34 96 aa3.98□□□□□ -1.77
CDC42BPA-210ENST00000462553 HRES1P13985 223 aa3.98□□□□□ -1.77
CDC42BPA-210ENST00000462553 NREPQ16612 68 aa3.98□□□□□ -1.77
CDC42BPA-210ENST00000462553 MPLKIPQ8TAP9 179 aa3.98□□□□□ -1.77
CDC42BPA-210ENST00000462553 MMP24-AS1A0A0U1RRL7 71 aa3.97□□□□□ -1.77
CDC42BPA-210ENST00000462553 NDUFB1O75438 58 aa3.97□□□□□ -1.77
CDC42BPA-210ENST00000462553 PRR15Q8IV56 129 aa3.97□□□□□ -1.77
CDC42BPA-210ENST00000462553 ZCCHC13Q8WW36 166 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-210ENST00000462553 PCP4L1A6NKN8 68 aa3.95□□□□□ -1.78
CDC42BPA-210ENST00000462553 K7EQZ3 153 aa3.95□□□□□ -1.78
CDC42BPA-210ENST00000462553 Q6ZVQ6 151 aa3.95□□□□□ -1.78
CDC42BPA-210ENST00000462553 TMEM254Q8TBM7 123 aa3.93□□□□□ -1.78
CDC42BPA-210ENST00000462553 BPY2O14599 106 aa3.92□□□□□ -1.78
CDC42BPA-210ENST00000462553 MRPL34Q9BQ48 92 aaKnown RBP3.92□□□□□ -1.78
CDC42BPA-210ENST00000462553 LINC00846Q9NV44 126 aa3.92□□□□□ -1.78
CDC42BPA-210ENST00000462553 hDV103S1A0JD37 113 aa3.91□□□□□ -1.78
CDC42BPA-210ENST00000462553 Q8N9L7 120 aa3.91□□□□□ -1.78
CDC42BPA-210ENST00000462553 SPINK7P58062 85 aa3.9□□□□□ -1.79
CDC42BPA-210ENST00000462553 KRTAP10-10P60014 251 aa3.9□□□□□ -1.79
CDC42BPA-210ENST00000462553 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
CDC42BPA-210ENST00000462553 GTF2H5Q6ZYL4 71 aa3.9□□□□□ -1.79
CDC42BPA-210ENST00000462553 FAM236DA0A1B0GTK5 79 aa3.89□□□□□ -1.79
CDC42BPA-210ENST00000462553 FAM236CP0DP71 79 aa3.89□□□□□ -1.79
CDC42BPA-210ENST00000462553 RBM12B-AS1Q9P1G2 102 aa3.89□□□□□ -1.79
CDC42BPA-210ENST00000462553 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
CDC42BPA-210ENST00000462553 F8W1H4 67 aa3.87□□□□□ -1.79
CDC42BPA-210ENST00000462553 ETDBQ3ZM63 59 aa3.87□□□□□ -1.79
CDC42BPA-210ENST00000462553 WFDC13Q8IUB5 93 aa3.87□□□□□ -1.79
CDC42BPA-210ENST00000462553 Q5W150 140 aa3.86□□□□□ -1.79
CDC42BPA-210ENST00000462553 UBL5Q9BZL1 73 aa3.86□□□□□ -1.79
CDC42BPA-210ENST00000462553 NDUFS5O43920 106 aa3.85□□□□□ -1.79
CDC42BPA-210ENST00000462553 CASC2Q6XLA1 102 aa3.85□□□□□ -1.79
CDC42BPA-210ENST00000462553 HCG22E2RYF7 251 aa3.84□□□□□ -1.79
CDC42BPA-210ENST00000462553 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
CDC42BPA-210ENST00000462553 NEBP20929 6669 aa3.81□□□□□ -1.8
CDC42BPA-210ENST00000462553 CXCL6P80162 114 aa3.81□□□□□ -1.8
CDC42BPA-210ENST00000462553 IGKV2D-30A0A075B6S6 120 aa3.8□□□□□ -1.8
CDC42BPA-210ENST00000462553 IGKV2-30P06310 120 aa3.8□□□□□ -1.8
CDC42BPA-210ENST00000462553 C7orf65Q6ZTY9 151 aa3.8□□□□□ -1.8
CDC42BPA-210ENST00000462553 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms