RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 MROH2AA6NES4 1674 aa0.11□□□□□ -2.39
SPTLC1-203ENST00000461132 WFDC10BQ8IUB3 73 aa0.11□□□□□ -2.39
SPTLC1-203ENST00000461132 A0A1B0GUL6 1792 aa0.11□□□□□ -2.39
SPTLC1-203ENST00000461132 SPG11Q96JI7 2443 aa0.09□□□□□ -2.39
SPTLC1-203ENST00000461132 HUWE1Q7Z6Z7 4374 aaKnown RBP0.09□□□□□ -2.39
SPTLC1-203ENST00000461132 M0QY20 66 aa0.09□□□□□ -2.4
SPTLC1-203ENST00000461132 DEFB110Q30KQ9 67 aa0.09□□□□□ -2.4
SPTLC1-203ENST00000461132 KRTAP6-2Q3LI66 62 aa0.09□□□□□ -2.4
SPTLC1-203ENST00000461132 SONP18583 2426 aaKnown RBP0.09□□□□□ -2.4
SPTLC1-203ENST00000461132 TNRC18O15417 2968 aaPredicted RBP0.09□□□□□ -2.4
SPTLC1-203ENST00000461132 MTORP42345 2549 aa0.08□□□□□ -2.4
SPTLC1-203ENST00000461132 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
SPTLC1-203ENST00000461132 KMT2AQ03164 3969 aa0.08□□□□□ -2.4
SPTLC1-203ENST00000461132 TNP1P09430 55 aa0.07□□□□□ -2.4
SPTLC1-203ENST00000461132 SPRR2EP22531 72 aa0.07□□□□□ -2.4
SPTLC1-203ENST00000461132 BSNQ9UPA5 3926 aa0.07□□□□□ -2.4
SPTLC1-203ENST00000461132 FAT2Q9NYQ8 4349 aa0.06□□□□□ -2.4
SPTLC1-203ENST00000461132 PRRC2CQ9Y520 2896 aaKnown RBP0.06□□□□□ -2.4
SPTLC1-203ENST00000461132 A8MTW9 85 aa0.06□□□□□ -2.4
SPTLC1-203ENST00000461132 MT1AP04731 61 aa0.06□□□□□ -2.4
SPTLC1-203ENST00000461132 SMIM2Q9BVW6 85 aa0.06□□□□□ -2.4
SPTLC1-203ENST00000461132 LPAP08519 4548 aa0.06□□□□□ -2.4
SPTLC1-203ENST00000461132 PRKDCP78527 4128 aaKnown RBP0.06□□□□□ -2.4
SPTLC1-203ENST00000461132 HMCN2Q8NDA2 5059 aa0.06□□□□□ -2.4
SPTLC1-203ENST00000461132 SETD2Q9BYW2 2564 aaPredicted RBP0.05□□□□□ -2.4
SPTLC1-203ENST00000461132 ZANQ9Y493 2812 aa0.05□□□□□ -2.4
SPTLC1-203ENST00000461132 LINC01546A6NGU7 62 aa0.05□□□□□ -2.4
SPTLC1-203ENST00000461132 LMO7Q8WWI1 1683 aa0.05□□□□□ -2.4
SPTLC1-203ENST00000461132 HSPG2P98160 4391 aa0.04□□□□□ -2.4
SPTLC1-203ENST00000461132 COL6A3P12111 3177 aa0.04□□□□□ -2.4
SPTLC1-203ENST00000461132 M0QZ58 72 aa0.04□□□□□ -2.4
SPTLC1-203ENST00000461132 KIF21BO75037 1637 aa0.04□□□□□ -2.4
SPTLC1-203ENST00000461132 DEFB131AP59861 70 aa0.03□□□□□ -2.4
SPTLC1-203ENST00000461132 STAB1Q9NY15 2570 aa0.03□□□□□ -2.4
SPTLC1-203ENST00000461132 NRXN3Q9Y4C0 1643 aa0.02□□□□□ -2.41
SPTLC1-203ENST00000461132 ALMS1Q8TCU4 4167 aa0.02□□□□□ -2.41
SPTLC1-203ENST00000461132 TFF3Q07654 80 aa0.02□□□□□ -2.41
SPTLC1-203ENST00000461132 NF1P21359 2839 aa0.01□□□□□ -2.41
SPTLC1-203ENST00000461132 TENM2Q9NT68 2774 aa0.01□□□□□ -2.41
SPTLC1-203ENST00000461132 LRP2P98164 4655 aa0□□□□□ -2.41
SPTLC1-203ENST00000461132 STAB2Q8WWQ8 2551 aa0□□□□□ -2.41
SPTLC1-203ENST00000461132 FAM208AQ9UK61 1670 aaKnown RBP0□□□□□ -2.41
SPTLC1-203ENST00000461132 DSTQ03001 7570 aaKnown RBP-0.02□□□□□ -2.41
SPTLC1-203ENST00000461132 MAP1AP78559 2803 aaPredicted RBP-0.02□□□□□ -2.41
SPTLC1-203ENST00000461132 EPG5Q9HCE0 2579 aa-0.02□□□□□ -2.41
SPTLC1-203ENST00000461132 SPRR2FQ96RM1 72 aa-0.02□□□□□ -2.41
SPTLC1-203ENST00000461132 FAM186AA6NE01 2351 aa-0.02□□□□□ -2.41
SPTLC1-203ENST00000461132 ACACAQ13085 2346 aa-0.02□□□□□ -2.41
SPTLC1-203ENST00000461132 DDX60Q8IY21 1712 aaKnown RBP-0.02□□□□□ -2.41
SPTLC1-203ENST00000461132 LRRK2Q5S007 2527 aa-0.03□□□□□ -2.41
SPTLC1-203ENST00000461132 NBEAL1Q6ZS30 2694 aa-0.03□□□□□ -2.41
SPTLC1-203ENST00000461132 CLPSL2Q6UWE3 100 aa-0.03□□□□□ -2.41
SPTLC1-203ENST00000461132 TOMM5Q8N4H5 51 aa-0.03□□□□□ -2.41
SPTLC1-203ENST00000461132 PKHD1P08F94 4074 aa-0.03□□□□□ -2.41
SPTLC1-203ENST00000461132 MUC2Q02817 5179 aa-0.03□□□□□ -2.41
SPTLC1-203ENST00000461132 MUC12Q9UKN1 5478 aa-0.04□□□□□ -2.42
SPTLC1-203ENST00000461132 PKD1P98161 4303 aa-0.04□□□□□ -2.42
SPTLC1-203ENST00000461132 GCN1Q92616 2671 aaKnown RBP-0.04□□□□□ -2.42
SPTLC1-203ENST00000461132 PDZD2O15018 2839 aa-0.05□□□□□ -2.42
SPTLC1-203ENST00000461132 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.05□□□□□ -2.42
SPTLC1-203ENST00000461132 NEBP20929 6669 aa-0.05□□□□□ -2.42
SPTLC1-203ENST00000461132 FASNP49327 2511 aaKnown RBP-0.06□□□□□ -2.42
SPTLC1-203ENST00000461132 SRRM2Q9UQ35 2752 aaKnown RBP-0.06□□□□□ -2.42
SPTLC1-203ENST00000461132 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
SPTLC1-203ENST00000461132 PCLOQ9Y6V0 5065 aa-0.06□□□□□ -2.42
SPTLC1-203ENST00000461132 HECTD4Q9Y4D8 3996 aa-0.06□□□□□ -2.42
SPTLC1-203ENST00000461132 LRP1BQ9NZR2 4599 aa-0.06□□□□□ -2.42
SPTLC1-203ENST00000461132 TGP01266 2768 aa-0.06□□□□□ -2.42
SPTLC1-203ENST00000461132 ANKRD11Q6UB99 2663 aaPredicted RBP-0.07□□□□□ -2.42
SPTLC1-203ENST00000461132 TRPM2O94759 1503 aa-0.07□□□□□ -2.42
SPTLC1-203ENST00000461132 IQGAP1P46940 1657 aa-0.08□□□□□ -2.42
SPTLC1-203ENST00000461132 FLGP20930 4061 aaPredicted RBP-0.08□□□□□ -2.42
SPTLC1-203ENST00000461132 SVEP1Q4LDE5 3571 aa-0.08□□□□□ -2.42
SPTLC1-203ENST00000461132 HIVEP1P15822 2718 aa-0.08□□□□□ -2.42
SPTLC1-203ENST00000461132 NDUFA1O15239 70 aa-0.08□□□□□ -2.42
SPTLC1-203ENST00000461132 KRTAP19-7Q3SYF9 63 aa-0.08□□□□□ -2.42
SPTLC1-203ENST00000461132 ZZEF1O43149 2961 aa-0.09□□□□□ -2.42
SPTLC1-203ENST00000461132 DMXL1Q9Y485 3027 aa-0.09□□□□□ -2.42
SPTLC1-203ENST00000461132 TEP1Q99973 2627 aaKnown RBP-0.1□□□□□ -2.42
SPTLC1-203ENST00000461132 ACACBO00763 2458 aa-0.1□□□□□ -2.43
SPTLC1-203ENST00000461132 MXRA5Q9NR99 2828 aa-0.1□□□□□ -2.43
SPTLC1-203ENST00000461132 DNAH9Q9NYC9 4486 aa-0.1□□□□□ -2.43
SPTLC1-203ENST00000461132 UTP20O75691 2785 aaKnown RBP-0.11□□□□□ -2.43
SPTLC1-203ENST00000461132 RIF1Q5UIP0 2472 aaKnown RBP-0.11□□□□□ -2.43
SPTLC1-203ENST00000461132 SPART-AS1P0CW21 52 aa-0.11□□□□□ -2.43
SPTLC1-203ENST00000461132 TACC2O95359 2948 aa-0.11□□□□□ -2.43
SPTLC1-203ENST00000461132 IQGAP2Q13576 1575 aa-0.11□□□□□ -2.43
SPTLC1-203ENST00000461132 LYSTQ99698 3801 aa-0.12□□□□□ -2.43
SPTLC1-203ENST00000461132 CCDC168Q8NDH2 2452 aa-0.12□□□□□ -2.43
SPTLC1-203ENST00000461132 HERC1Q15751 4861 aa-0.12□□□□□ -2.43
SPTLC1-203ENST00000461132 FAT3Q8TDW7 4589 aa-0.13□□□□□ -2.43
SPTLC1-203ENST00000461132 KMT2CQ8NEZ4 4911 aaKnown RBP-0.13□□□□□ -2.43
SPTLC1-203ENST00000461132 NBEAL2Q6ZNJ1 2754 aa-0.13□□□□□ -2.43
SPTLC1-203ENST00000461132 CLTCL1P53675 1640 aa-0.13□□□□□ -2.43
SPTLC1-203ENST00000461132 NBEAQ8NFP9 2946 aa-0.14□□□□□ -2.43
SPTLC1-203ENST00000461132 MGAM2Q2M2H8 2515 aa-0.14□□□□□ -2.43
SPTLC1-203ENST00000461132 MYO18BQ8IUG5 2567 aa-0.14□□□□□ -2.43
SPTLC1-203ENST00000461132 POLR2KP53803 58 aaKnown RBP-0.15□□□□□ -2.43
SPTLC1-203ENST00000461132 DEFB1P60022 68 aa-0.15□□□□□ -2.43
SPTLC1-203ENST00000461132 NFAT5O94916 1531 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms