RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 TSKUQ8WUA8 353 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 PPDPFLQ8WWR9 84 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 CLEC2BQ92478 149 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 RAB37Q96AX2 223 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 SPRR2FQ96RM1 72 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 PMCHL2Q9BQD1 86 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 FXYD6Q9H0Q3 95 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 OSTCQ9NRP0 149 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 HIGD1BQ9P298 99 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 V9GYH0 126 aa0.83□□□□□ -2.28
RFC4-211ENST00000460408 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
RFC4-211ENST00000460408 A0A087WWC5 75 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 TRAV1-2A0A0B4J238 106 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 FAM24AA6NFZ4 105 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 SNRPGP15A8MWD9 76 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 H7BZZ5 65 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 PPYP01298 95 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 IL5P05113 134 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 S100A4P26447 101 aaKnown RBP0.82□□□□□ -2.28
RFC4-211ENST00000460408 SSBP1Q04837 148 aaKnown RBP0.82□□□□□ -2.28
RFC4-211ENST00000460408 PDE6HQ13956 83 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 CFAP126Q5VTH2 177 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 ATP11AUNQ6ZP68 121 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 SERP2Q8N6R1 65 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 OR2T35Q8NGX2 323 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 FAM213BQ8TBF2 198 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 SMIM4Q8WVI0 70 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 COPS9Q8WXC6 57 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 TMEM242Q9NWH2 141 aa0.82□□□□□ -2.28
RFC4-211ENST00000460408 FXYD6-FXYD2A0A087WZ82 144 aa0.81□□□□□ -2.28
RFC4-211ENST00000460408 IGKV2D-26A0A0A0MRZ7 120 aa0.81□□□□□ -2.28
RFC4-211ENST00000460408 UBE2L5PA0A1B0GUS4 154 aa0.81□□□□□ -2.28
RFC4-211ENST00000460408 KANTRA0A1W2PQU2 76 aa0.81□□□□□ -2.28
RFC4-211ENST00000460408 ATOX1O00244 68 aa0.81□□□□□ -2.28
RFC4-211ENST00000460408 ROMO1P60602 79 aa0.81□□□□□ -2.28
RFC4-211ENST00000460408 UBE2L3P68036 154 aaKnown RBP0.81□□□□□ -2.28
RFC4-211ENST00000460408 RBM3P98179 157 aaKnown RBP0.81□□□□□ -2.28
RFC4-211ENST00000460408 RHOHQ15669 191 aa0.81□□□□□ -2.28
RFC4-211ENST00000460408 SPANXN5Q5MJ07 72 aa0.81□□□□□ -2.28
RFC4-211ENST00000460408 LINC00269Q8N2A0 174 aa0.81□□□□□ -2.28
RFC4-211ENST00000460408 CHCHD1Q96BP2 118 aaKnown RBP0.81□□□□□ -2.28
RFC4-211ENST00000460408 LOC110117498A0A087WWA1 95 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 PIGBOS1A0A0B4J2F0 54 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 CEBPZOSA8MTT3 80 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 UMAD1C9J7I0 102 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 MT2AP02795 61 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 CKS2P33552 79 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 ATP5EP56381 51 aaPredicted RBP0.8□□□□□ -2.28
RFC4-211ENST00000460408 UBE2D3P61077 147 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 COX6A2Q02221 97 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 S100A7L2Q5SY68 101 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 SPAG11AQ6PDA7 123 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 KRTAP26-1Q6PEX3 210 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 ENHOQ6UWT2 76 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 TRGV9Q99603 122 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 NMES1Q9C002 83 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 MRPL35Q9NZE8 188 aaKnown RBP0.8□□□□□ -2.28
RFC4-211ENST00000460408 SNURFQ9Y675 71 aa0.8□□□□□ -2.28
RFC4-211ENST00000460408 A0A096LNI7 61 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 TRAV13-2A0A0B4J235 113 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 IGHV1-24A0A0C4DH33 117 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 TRBV6-4A0A1B0GX49 114 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 CRYM-AS1A6NIL9 109 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 F2Z2F3 143 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 C17orf112F2Z3M2 114 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 BAALC-AS2P0C853 105 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 C3orf79P0CE67 100 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 SMIM13P0DJ93 91 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 UBE2G1P62253 170 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 PMCHL1Q16048 86 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 Q5VV11 94 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 CLPSL2Q6UWE3 100 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 PPP1R1CQ8WVI7 109 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 NXT2Q9NPJ8 142 aaKnown RBP0.79□□□□□ -2.28
RFC4-211ENST00000460408 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
RFC4-211ENST00000460408 MUC5BQ9HC84 5762 aaPredicted RBP0.78□□□□□ -2.28
RFC4-211ENST00000460408 A0A087WSZ3 146 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 TRAV22A0A0B4J277 110 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 LOC107984156A0A0G2JMH3 177 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 hDV103S1A0JD37 113 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 HCG22E2RYF7 251 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 M0R3E3 92 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 MT1FP04733 61 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 COX8AP10176 69 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 IAPPP10997 89 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 UBE2D2P62837 147 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 KLKP1Q107X0 134 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 C9orf116Q5BN46 136 aaPredicted RBP0.78□□□□□ -2.28
RFC4-211ENST00000460408 RPL7L1Q6DKI1 246 aaKnown RBP0.78□□□□□ -2.28
RFC4-211ENST00000460408 CYP2G1PQ6ZSU1 146 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 LINC00643Q86TS7 51 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 ARL17AQ8IVW1 177 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 TMEM141Q96I45 108 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 MGST2Q99735 147 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 MANBALQ9NQG1 85 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 C22orf24Q9Y442 160 aa0.78□□□□□ -2.28
RFC4-211ENST00000460408 TRAV12-1A0A0B4J245 112 aa0.77□□□□□ -2.29
RFC4-211ENST00000460408 TEX49A0A1B0GTD5 131 aa0.77□□□□□ -2.29
RFC4-211ENST00000460408 CTXND1A0A1B0GTU2 59 aa0.77□□□□□ -2.29
RFC4-211ENST00000460408 MGST1P10620 155 aaKnown RBP0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms