RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 LINC00472Q9H8W2 130 aa8.65□□□□□ -1.02
CD28-203ENST00000458610 LOC110117498A0A087WWA1 95 aa8.64□□□□□ -1.03
CD28-203ENST00000458610 LINC00313P59037 77 aa8.62□□□□□ -1.03
CD28-203ENST00000458610 Q6ZQT0 140 aa8.61□□□□□ -1.03
CD28-203ENST00000458610 J3KT08 172 aa8.6□□□□□ -1.03
CD28-203ENST00000458610 SMCPP49901 116 aaPredicted RBP8.6□□□□□ -1.03
CD28-203ENST00000458610 DEFB116Q30KQ4 102 aa8.59□□□□□ -1.03
CD28-203ENST00000458610 DSCR10P59022 87 aa8.58□□□□□ -1.04
CD28-203ENST00000458610 C20orf166-AS1Q96NR2 134 aa8.58□□□□□ -1.04
CD28-203ENST00000458610 C14orf132Q9NPU4 83 aa8.58□□□□□ -1.04
CD28-203ENST00000458610 A8MUU9 505 aa8.56□□□□□ -1.04
CD28-203ENST00000458610 ACYP1P07311 99 aa8.56□□□□□ -1.04
CD28-203ENST00000458610 LCE2AQ5TA79 106 aaPredicted RBP8.55□□□□□ -1.04
CD28-203ENST00000458610 MTURNQ8N3F0 131 aa8.55□□□□□ -1.04
CD28-203ENST00000458610 IGHV6-1A0A0B4J1U7 121 aa8.54□□□□□ -1.04
CD28-203ENST00000458610 C8orf87E5RJ46 101 aa8.54□□□□□ -1.04
CD28-203ENST00000458610 NDUFB1O75438 58 aa8.54□□□□□ -1.04
CD28-203ENST00000458610 A0A1B0GVX0 72 aa8.52□□□□□ -1.05
CD28-203ENST00000458610 FAT4Q6V0I7 4981 aa8.52□□□□□ -1.05
CD28-203ENST00000458610 NREPQ16612 68 aa8.5□□□□□ -1.05
CD28-203ENST00000458610 FAM240AA0A1B0GVK7 77 aa8.49□□□□□ -1.05
CD28-203ENST00000458610 SCGB1A1P11684 91 aa8.49□□□□□ -1.05
CD28-203ENST00000458610 KRTAP16-1A8MUX0 517 aa8.47□□□□□ -1.05
CD28-203ENST00000458610 NOTCH2NLQ7Z3S9 236 aa8.46□□□□□ -1.06
CD28-203ENST00000458610 A8MWP4 228 aa8.45□□□□□ -1.06
CD28-203ENST00000458610 COX6B2Q6YFQ2 88 aa8.44□□□□□ -1.06
CD28-203ENST00000458610 LCE2CQ5TA81 110 aa8.42□□□□□ -1.06
CD28-203ENST00000458610 KRTAP19-2Q3LHN2 52 aa8.41□□□□□ -1.06
CD28-203ENST00000458610 PCP4P48539 62 aa8.39□□□□□ -1.07
CD28-203ENST00000458610 C8orf17Q9NRJ1 99 aa8.39□□□□□ -1.07
CD28-203ENST00000458610 IGKV3D-7A0A0C4DH55 119 aa8.38□□□□□ -1.07
CD28-203ENST00000458610 PRR15Q8IV56 129 aa8.38□□□□□ -1.07
CD28-203ENST00000458610 BPY2O14599 106 aa8.35□□□□□ -1.07
CD28-203ENST00000458610 LINC00643Q86TS7 51 aa8.35□□□□□ -1.07
CD28-203ENST00000458610 IMUPQ9GZP8 106 aa8.35□□□□□ -1.07
CD28-203ENST00000458610 MT1HP80294 61 aa8.34□□□□□ -1.07
CD28-203ENST00000458610 Q8N9P0 234 aaPredicted RBP8.34□□□□□ -1.07
CD28-203ENST00000458610 Q6ZVQ6 151 aa8.33□□□□□ -1.08
CD28-203ENST00000458610 LCE2BO14633 110 aa8.32□□□□□ -1.08
CD28-203ENST00000458610 ZCCHC13Q8WW36 166 aaKnown RBP8.32□□□□□ -1.08
CD28-203ENST00000458610 UBL5Q9BZL1 73 aa8.3□□□□□ -1.08
CD28-203ENST00000458610 M0R2T5 61 aa8.29□□□□□ -1.08
CD28-203ENST00000458610 TMEM254Q8TBM7 123 aa8.29□□□□□ -1.08
CD28-203ENST00000458610 MRPL34Q9BQ48 92 aaKnown RBP8.28□□□□□ -1.08
CD28-203ENST00000458610 K7EQZ3 153 aa8.27□□□□□ -1.09
CD28-203ENST00000458610 MT-ATP8P03928 68 aa8.27□□□□□ -1.09
CD28-203ENST00000458610 RBM12B-AS1Q9P1G2 102 aa8.27□□□□□ -1.09
CD28-203ENST00000458610 MMP24-AS1A0A0U1RRL7 71 aa8.26□□□□□ -1.09
CD28-203ENST00000458610 hDV103S1A0JD37 113 aa8.26□□□□□ -1.09
CD28-203ENST00000458610 LINC00846Q9NV44 126 aa8.24□□□□□ -1.09
CD28-203ENST00000458610 FAM236DA0A1B0GTK5 79 aa8.23□□□□□ -1.09
CD28-203ENST00000458610 FAM236CP0DP71 79 aa8.23□□□□□ -1.09
CD28-203ENST00000458610 ATP5EP2Q5VTU8 51 aa8.23□□□□□ -1.09
CD28-203ENST00000458610 NDUFS5O43920 106 aa8.21□□□□□ -1.1
CD28-203ENST00000458610 SPINK7P58062 85 aa8.21□□□□□ -1.1
CD28-203ENST00000458610 HRES1P13985 223 aa8.19□□□□□ -1.1
CD28-203ENST00000458610 CASC2Q6XLA1 102 aa8.18□□□□□ -1.1
CD28-203ENST00000458610 KRTAP9-2Q9BYQ4 174 aa8.18□□□□□ -1.1
CD28-203ENST00000458610 MPLKIPQ8TAP9 179 aa8.17□□□□□ -1.1
CD28-203ENST00000458610 KRTAP10-6P60371 365 aaPredicted RBP8.16□□□□□ -1.1
CD28-203ENST00000458610 WFDC13Q8IUB5 93 aa8.16□□□□□ -1.1
CD28-203ENST00000458610 Q8N9L7 120 aa8.16□□□□□ -1.1
CD28-203ENST00000458610 ANAPC13Q9BS18 74 aa8.14□□□□□ -1.11
CD28-203ENST00000458610 LORP23490 312 aaPredicted RBP8.13□□□□□ -1.11
CD28-203ENST00000458610 HCG22E2RYF7 251 aa8.11□□□□□ -1.11
CD28-203ENST00000458610 CXCL6P80162 114 aa8.11□□□□□ -1.11
CD28-203ENST00000458610 ATOX1O00244 68 aa8.07□□□□□ -1.12
CD28-203ENST00000458610 HIST1H4AP62805 103 aaKnown RBP8.04□□□□□ -1.12
CD28-203ENST00000458610 FAM236AA0A1B0GUQ0 79 aa8.03□□□□□ -1.12
CD28-203ENST00000458610 FAM236BA0A1B0GV22 79 aa8.03□□□□□ -1.12
CD28-203ENST00000458610 Q5W150 140 aa8.03□□□□□ -1.12
CD28-203ENST00000458610 C7orf65Q6ZTY9 151 aa8.03□□□□□ -1.12
CD28-203ENST00000458610 SMIM20Q8N5G0 67 aa8.03□□□□□ -1.12
CD28-203ENST00000458610 IGKV2D-30A0A075B6S6 120 aa8.02□□□□□ -1.13
CD28-203ENST00000458610 IGKV2-30P06310 120 aa8.02□□□□□ -1.13
CD28-203ENST00000458610 FLGP20930 4061 aaPredicted RBP8.02□□□□□ -1.13
CD28-203ENST00000458610 TP53AIP1Q9HCN2 124 aa8.01□□□□□ -1.13
CD28-203ENST00000458610 UQCRQO14949 82 aa7.98□□□□□ -1.13
CD28-203ENST00000458610 COX7CP15954 63 aa7.93□□□□□ -1.14
CD28-203ENST00000458610 SERP2Q8N6R1 65 aa7.93□□□□□ -1.14
CD28-203ENST00000458610 H1FX-AS1Q4G0G2 97 aa7.92□□□□□ -1.14
CD28-203ENST00000458610 KRTAP9-8Q9BYQ0 159 aa7.91□□□□□ -1.14
CD28-203ENST00000458610 A0A087WVE0 104 aa7.87□□□□□ -1.15
CD28-203ENST00000458610 KRTAP9-6A0A140TA67 174 aa7.87□□□□□ -1.15
CD28-203ENST00000458610 TRAV7A0A075B6U4 112 aa7.86□□□□□ -1.15
CD28-203ENST00000458610 C4orf26Q17RF5 130 aa7.84□□□□□ -1.15
CD28-203ENST00000458610 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
CD28-203ENST00000458610 MT2AP02795 61 aa7.82□□□□□ -1.16
CD28-203ENST00000458610 CRCT1Q9UGL9 99 aa7.8□□□□□ -1.16
CD28-203ENST00000458610 TRAV22A0A0B4J277 110 aa7.79□□□□□ -1.16
CD28-203ENST00000458610 KRTAP10-10P60014 251 aa7.79□□□□□ -1.16
CD28-203ENST00000458610 LOC101927531A0A1B0GV80 90 aa7.77□□□□□ -1.17
CD28-203ENST00000458610 NDUFC1O43677 76 aa7.76□□□□□ -1.17
CD28-203ENST00000458610 C1orf64Q8NEQ6 169 aa7.76□□□□□ -1.17
CD28-203ENST00000458610 CYP4F30PQ9H0H9 118 aa7.76□□□□□ -1.17
CD28-203ENST00000458610 MT1FP04733 61 aa7.74□□□□□ -1.17
CD28-203ENST00000458610 TMEM258P61165 79 aa7.71□□□□□ -1.18
CD28-203ENST00000458610 H0Y9P7 68 aa7.7□□□□□ -1.18
CD28-203ENST00000458610 C5orf47Q569G3 176 aa7.7□□□□□ -1.18
CD28-203ENST00000458610 KLKP1Q107X0 134 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms