RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 JMJD7-PLA2G4BH0Y9G9 81 aa6.13□□□□□ -1.43
LMCD1-206ENST00000456506 NDUFV3P56181 108 aaKnown RBP6.13□□□□□ -1.43
LMCD1-206ENST00000456506 Q75L30 129 aa6.11□□□□□ -1.43
LMCD1-206ENST00000456506 C21orf62-AS1Q17RA5 79 aa6.1□□□□□ -1.43
LMCD1-206ENST00000456506 LOC110117498A0A087WWA1 95 aa6.09□□□□□ -1.43
LMCD1-206ENST00000456506 TRBV7-4A0A0J9YYF1 115 aa6.09□□□□□ -1.43
LMCD1-206ENST00000456506 PDE6GP18545 87 aa6.09□□□□□ -1.43
LMCD1-206ENST00000456506 RBM3P98179 157 aaKnown RBP6.09□□□□□ -1.43
LMCD1-206ENST00000456506 Q6Q795 121 aa6.08□□□□□ -1.44
LMCD1-206ENST00000456506 TRBV7-7A0A0K0K1E9 115 aa6.06□□□□□ -1.44
LMCD1-206ENST00000456506 ATP11AUNQ6ZP68 121 aa6.06□□□□□ -1.44
LMCD1-206ENST00000456506 MT2AP02795 61 aa6.05□□□□□ -1.44
LMCD1-206ENST00000456506 Q6JHZ5 121 aa6.05□□□□□ -1.44
LMCD1-206ENST00000456506 IGFL1Q6UW32 110 aa6.05□□□□□ -1.44
LMCD1-206ENST00000456506 Q6ZQT0 140 aa6.05□□□□□ -1.44
LMCD1-206ENST00000456506 DSCR8Q96T75 97 aa6.05□□□□□ -1.44
LMCD1-206ENST00000456506 MACF1Q9UPN3 7388 aaKnown RBP6.05□□□□□ -1.44
LMCD1-206ENST00000456506 FAM240AA0A1B0GVK7 77 aa6.04□□□□□ -1.44
LMCD1-206ENST00000456506 A0A1B0GW54 56 aa6.04□□□□□ -1.44
LMCD1-206ENST00000456506 J3QR89 54 aa6.04□□□□□ -1.44
LMCD1-206ENST00000456506 CCKP06307 115 aa6.04□□□□□ -1.44
LMCD1-206ENST00000456506 C14orf132Q9NPU4 83 aa6.04□□□□□ -1.44
LMCD1-206ENST00000456506 F8WEM9 126 aa6.03□□□□□ -1.44
LMCD1-206ENST00000456506 K7ERU9 68 aa6.03□□□□□ -1.44
LMCD1-206ENST00000456506 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
LMCD1-206ENST00000456506 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
LMCD1-206ENST00000456506 ACYP1P07311 99 aa6.02□□□□□ -1.45
LMCD1-206ENST00000456506 C20orf166-AS1Q96NR2 134 aa6.02□□□□□ -1.45
LMCD1-206ENST00000456506 MT1FP04733 61 aa6.01□□□□□ -1.45
LMCD1-206ENST00000456506 A0A1W2PNM2 257 aa6□□□□□ -1.45
LMCD1-206ENST00000456506 A8MUU9 505 aa6□□□□□ -1.45
LMCD1-206ENST00000456506 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
LMCD1-206ENST00000456506 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
LMCD1-206ENST00000456506 Q96NJ1 140 aa5.98□□□□□ -1.45
LMCD1-206ENST00000456506 A0A1B0GV72 72 aa5.96□□□□□ -1.46
LMCD1-206ENST00000456506 KRTAP16-1A8MUX0 517 aa5.96□□□□□ -1.46
LMCD1-206ENST00000456506 MPLKIPQ8TAP9 179 aa5.94□□□□□ -1.46
LMCD1-206ENST00000456506 LINC00846Q9NV44 126 aa5.93□□□□□ -1.46
LMCD1-206ENST00000456506 HRES1P13985 223 aa5.9□□□□□ -1.46
LMCD1-206ENST00000456506 VPS25Q9BRG1 176 aa5.9□□□□□ -1.46
LMCD1-206ENST00000456506 LINC00643Q86TS7 51 aa5.89□□□□□ -1.47
LMCD1-206ENST00000456506 UBL5Q9BZL1 73 aa5.89□□□□□ -1.47
LMCD1-206ENST00000456506 A0A087WSZ3 146 aa5.88□□□□□ -1.47
LMCD1-206ENST00000456506 Q6ZVQ6 151 aa5.88□□□□□ -1.47
LMCD1-206ENST00000456506 DSCR10P59022 87 aa5.87□□□□□ -1.47
LMCD1-206ENST00000456506 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
LMCD1-206ENST00000456506 SS18L2Q9UHA2 77 aa5.87□□□□□ -1.47
LMCD1-206ENST00000456506 NREPQ16612 68 aa5.86□□□□□ -1.47
LMCD1-206ENST00000456506 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
LMCD1-206ENST00000456506 LINC00472Q9H8W2 130 aa5.86□□□□□ -1.47
LMCD1-206ENST00000456506 ATP5EP2Q5VTU8 51 aa5.85□□□□□ -1.47
LMCD1-206ENST00000456506 CXCL6P80162 114 aa5.84□□□□□ -1.47
LMCD1-206ENST00000456506 NOTCH2NLQ7Z3S9 236 aa5.84□□□□□ -1.47
LMCD1-206ENST00000456506 FAM236DA0A1B0GTK5 79 aa5.82□□□□□ -1.48
LMCD1-206ENST00000456506 FAM236CP0DP71 79 aa5.82□□□□□ -1.48
LMCD1-206ENST00000456506 J3KT08 172 aa5.81□□□□□ -1.48
LMCD1-206ENST00000456506 IMUPQ9GZP8 106 aa5.81□□□□□ -1.48
LMCD1-206ENST00000456506 SIGMAR1Q99720 223 aa5.8□□□□□ -1.48
LMCD1-206ENST00000456506 BPY2O14599 106 aa5.79□□□□□ -1.48
LMCD1-206ENST00000456506 RBM12B-AS1Q9P1G2 102 aa5.79□□□□□ -1.48
LMCD1-206ENST00000456506 MT-ATP8P03928 68 aa5.78□□□□□ -1.48
LMCD1-206ENST00000456506 LINC00313P59037 77 aa5.78□□□□□ -1.48
LMCD1-206ENST00000456506 IGKV3D-7A0A0C4DH55 119 aa5.75□□□□□ -1.49
LMCD1-206ENST00000456506 A8MWP4 228 aa5.75□□□□□ -1.49
LMCD1-206ENST00000456506 KRTAP6-3Q3LI67 103 aa5.75□□□□□ -1.49
LMCD1-206ENST00000456506 IGKV4-1P06312 121 aa5.74□□□□□ -1.49
LMCD1-206ENST00000456506 PRR15Q8IV56 129 aa5.74□□□□□ -1.49
LMCD1-206ENST00000456506 DEFB116Q30KQ4 102 aa5.72□□□□□ -1.49
LMCD1-206ENST00000456506 NDUFB1O75438 58 aa5.71□□□□□ -1.5
LMCD1-206ENST00000456506 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
LMCD1-206ENST00000456506 K7EQZ3 153 aa5.7□□□□□ -1.5
LMCD1-206ENST00000456506 PCP4P48539 62 aa5.69□□□□□ -1.5
LMCD1-206ENST00000456506 HIST1H4AP62805 103 aaKnown RBP5.69□□□□□ -1.5
LMCD1-206ENST00000456506 Q8N9L7 120 aa5.68□□□□□ -1.5
LMCD1-206ENST00000456506 IGHV6-1A0A0B4J1U7 121 aa5.67□□□□□ -1.5
LMCD1-206ENST00000456506 C8orf87E5RJ46 101 aa5.67□□□□□ -1.5
LMCD1-206ENST00000456506 SCGB1A1P11684 91 aa5.67□□□□□ -1.5
LMCD1-206ENST00000456506 KRTAP9-9Q9BYP9 154 aa5.67□□□□□ -1.5
LMCD1-206ENST00000456506 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
LMCD1-206ENST00000456506 SPINK7P58062 85 aa5.66□□□□□ -1.5
LMCD1-206ENST00000456506 C8orf17Q9NRJ1 99 aa5.66□□□□□ -1.5
LMCD1-206ENST00000456506 A0A087WVE0 104 aa5.65□□□□□ -1.5
LMCD1-206ENST00000456506 MMP24-AS1A0A0U1RRL7 71 aa5.65□□□□□ -1.5
LMCD1-206ENST00000456506 ZCCHC13Q8WW36 166 aaKnown RBP5.65□□□□□ -1.5
LMCD1-206ENST00000456506 NEBP20929 6669 aa5.65□□□□□ -1.51
LMCD1-206ENST00000456506 HCG22E2RYF7 251 aa5.64□□□□□ -1.51
LMCD1-206ENST00000456506 Q8N9P0 234 aaPredicted RBP5.64□□□□□ -1.51
LMCD1-206ENST00000456506 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
LMCD1-206ENST00000456506 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
LMCD1-206ENST00000456506 TMEM254Q8TBM7 123 aa5.62□□□□□ -1.51
LMCD1-206ENST00000456506 FAM236AA0A1B0GUQ0 79 aa5.61□□□□□ -1.51
LMCD1-206ENST00000456506 FAM236BA0A1B0GV22 79 aa5.61□□□□□ -1.51
LMCD1-206ENST00000456506 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
LMCD1-206ENST00000456506 CASC2Q6XLA1 102 aa5.61□□□□□ -1.51
LMCD1-206ENST00000456506 MUC12Q9UKN1 5478 aa5.6□□□□□ -1.51
LMCD1-206ENST00000456506 ATOX1O00244 68 aa5.58□□□□□ -1.52
LMCD1-206ENST00000456506 WFDC13Q8IUB5 93 aa5.58□□□□□ -1.52
LMCD1-206ENST00000456506 SMIM20Q8N5G0 67 aa5.58□□□□□ -1.52
LMCD1-206ENST00000456506 MRPL34Q9BQ48 92 aaKnown RBP5.58□□□□□ -1.52
LMCD1-206ENST00000456506 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms