RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 KRTAP10-2P60368 255 aa5.31□□□□□ -1.56
LMO3-210ENST00000453727 SPRR4Q96PI1 79 aa5.31□□□□□ -1.56
LMO3-210ENST00000453727 IGLV1-50A0A075B6I6 118 aa5.31□□□□□ -1.56
LMO3-210ENST00000453727 FAT2Q9NYQ8 4349 aa5.3□□□□□ -1.56
LMO3-210ENST00000453727 DNAH5Q8TE73 4624 aa5.3□□□□□ -1.56
LMO3-210ENST00000453727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.29□□□□□ -1.56
LMO3-210ENST00000453727 SPINK7P58062 85 aa5.29□□□□□ -1.56
LMO3-210ENST00000453727 IGLV7-46A0A075B6I9 117 aa5.28□□□□□ -1.56
LMO3-210ENST00000453727 SPACA4Q8TDM5 124 aa5.28□□□□□ -1.56
LMO3-210ENST00000453727 DHRS4-AS1Q9P1J3 65 aa5.28□□□□□ -1.56
LMO3-210ENST00000453727 RYR2Q92736 4967 aa5.28□□□□□ -1.56
LMO3-210ENST00000453727 PKD1P98161 4303 aa5.27□□□□□ -1.57
LMO3-210ENST00000453727 KRTAP4-16G5E9R7 235 aaPredicted RBP5.26□□□□□ -1.57
LMO3-210ENST00000453727 PLA2G1BP04054 148 aaKnown RBP5.26□□□□□ -1.57
LMO3-210ENST00000453727 SPRR1AP35321 89 aa5.26□□□□□ -1.57
LMO3-210ENST00000453727 KRTAP11-1Q8IUC1 163 aa5.26□□□□□ -1.57
LMO3-210ENST00000453727 PLAC8Q9NZF1 115 aa5.26□□□□□ -1.57
LMO3-210ENST00000453727 DNAH8Q96JB1 4490 aa5.26□□□□□ -1.57
LMO3-210ENST00000453727 REG3GQ6UW15 175 aa5.25□□□□□ -1.57
LMO3-210ENST00000453727 Q6ZRX8 168 aa5.24□□□□□ -1.57
LMO3-210ENST00000453727 ADM2Q7Z4H4 148 aa5.24□□□□□ -1.57
LMO3-210ENST00000453727 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
LMO3-210ENST00000453727 ASB16-AS1Q495Z4 193 aa5.23□□□□□ -1.57
LMO3-210ENST00000453727 RYR3Q15413 4870 aa5.23□□□□□ -1.57
LMO3-210ENST00000453727 KRTAP10-1P60331 282 aa5.23□□□□□ -1.57
LMO3-210ENST00000453727 PKHD1P08F94 4074 aa5.22□□□□□ -1.57
LMO3-210ENST00000453727 A0A1B0GVY2 172 aa5.22□□□□□ -1.57
LMO3-210ENST00000453727 RPL37AP61513 92 aaKnown RBP5.21□□□□□ -1.58
LMO3-210ENST00000453727 PCOTHQ58A44 107 aa5.21□□□□□ -1.58
LMO3-210ENST00000453727 PRLHP81277 87 aa5.21□□□□□ -1.58
LMO3-210ENST00000453727 A0A087WSZ3 146 aa5.19□□□□□ -1.58
LMO3-210ENST00000453727 Q6ZSA8 131 aa5.19□□□□□ -1.58
LMO3-210ENST00000453727 CIRBP-AS1Q8TBR5 109 aa5.19□□□□□ -1.58
LMO3-210ENST00000453727 RETNLBQ9BQ08 111 aa5.19□□□□□ -1.58
LMO3-210ENST00000453727 A0A087X002 238 aa5.18□□□□□ -1.58
LMO3-210ENST00000453727 PSORS1C2Q9UIG4 136 aa5.16□□□□□ -1.58
LMO3-210ENST00000453727 H0Y9J4 135 aa5.16□□□□□ -1.58
LMO3-210ENST00000453727 HRES1P13985 223 aa5.16□□□□□ -1.58
LMO3-210ENST00000453727 IGFL1Q6UW32 110 aa5.16□□□□□ -1.58
LMO3-210ENST00000453727 KRTAP13-1Q8IUC0 172 aa5.16□□□□□ -1.58
LMO3-210ENST00000453727 LRP1BQ9NZR2 4599 aa5.15□□□□□ -1.58
LMO3-210ENST00000453727 DYNC1H1Q14204 4646 aaKnown RBP5.15□□□□□ -1.58
LMO3-210ENST00000453727 A0A0G2JQZ4 141 aa5.15□□□□□ -1.58
LMO3-210ENST00000453727 A8MWP4 228 aa5.15□□□□□ -1.58
LMO3-210ENST00000453727 SRRM2Q9UQ35 2752 aaKnown RBP5.14□□□□□ -1.59
LMO3-210ENST00000453727 TP53AIP1Q9HCN2 124 aa5.13□□□□□ -1.59
LMO3-210ENST00000453727 CSAG1Q6PB30 78 aa5.12□□□□□ -1.59
LMO3-210ENST00000453727 ZNF706Q9Y5V0 76 aaPredicted RBP5.12□□□□□ -1.59
LMO3-210ENST00000453727 ZNF861PO60384 105 aa5.1□□□□□ -1.59
LMO3-210ENST00000453727 IGLV7-43P04211 117 aa5.09□□□□□ -1.59
LMO3-210ENST00000453727 SPRR1BP22528 89 aa5.08□□□□□ -1.6
LMO3-210ENST00000453727 SPATA8Q6RVD6 105 aa5.08□□□□□ -1.6
LMO3-210ENST00000453727 APOBP04114 4563 aaKnown RBP5.08□□□□□ -1.6
LMO3-210ENST00000453727 MMP24-AS1A0A0U1RRL7 71 aa5.08□□□□□ -1.6
LMO3-210ENST00000453727 SMR3BP02814 79 aaPredicted RBP5.08□□□□□ -1.6
LMO3-210ENST00000453727 IGLV8-61A0A075B6I0 122 aa5.07□□□□□ -1.6
LMO3-210ENST00000453727 A0A1B0GU69 56 aa5.07□□□□□ -1.6
LMO3-210ENST00000453727 LINC00472Q9H8W2 130 aa5.07□□□□□ -1.6
LMO3-210ENST00000453727 MIR22HGQ0VDD5 57 aa5.06□□□□□ -1.6
LMO3-210ENST00000453727 VPS13BQ7Z7G8 4022 aa5.05□□□□□ -1.6
LMO3-210ENST00000453727 UQCR11O14957 56 aa5.05□□□□□ -1.6
LMO3-210ENST00000453727 ACYP2P14621 99 aa5.05□□□□□ -1.6
LMO3-210ENST00000453727 EPPK1P58107 5090 aaKnown RBP5.04□□□□□ -1.6
LMO3-210ENST00000453727 LINC00483Q53H64 154 aa5.04□□□□□ -1.6
LMO3-210ENST00000453727 ANAPC11Q9NYG5 84 aa5.04□□□□□ -1.6
LMO3-210ENST00000453727 CDK2AP2O75956 126 aa5.03□□□□□ -1.6
LMO3-210ENST00000453727 FAT1Q14517 4588 aa5.02□□□□□ -1.61
LMO3-210ENST00000453727 IGLV9-49A0A0B4J1Y8 123 aa5.02□□□□□ -1.61
LMO3-210ENST00000453727 ROMO1P60602 79 aa4.99□□□□□ -1.61
LMO3-210ENST00000453727 C8orf17Q9NRJ1 99 aa4.99□□□□□ -1.61
LMO3-210ENST00000453727 FAM229AH3BQW9 127 aa4.98□□□□□ -1.61
LMO3-210ENST00000453727 KRTAP10-4P60372 401 aaPredicted RBP4.98□□□□□ -1.61
LMO3-210ENST00000453727 KIAA1109Q2LD37 5005 aa4.98□□□□□ -1.61
LMO3-210ENST00000453727 HSPG2P98160 4391 aa4.98□□□□□ -1.61
LMO3-210ENST00000453727 IGHV6-1A0A0B4J1U7 121 aa4.98□□□□□ -1.61
LMO3-210ENST00000453727 SPINK6Q6UWN8 80 aa4.97□□□□□ -1.61
LMO3-210ENST00000453727 KRTAP3-3Q9BYR6 98 aa4.97□□□□□ -1.61
LMO3-210ENST00000453727 KRTAP3-2Q9BYR7 98 aa4.97□□□□□ -1.61
LMO3-210ENST00000453727 KRTAP1-4P0C5Y4 121 aa4.96□□□□□ -1.61
LMO3-210ENST00000453727 Q5VSD8 79 aa4.96□□□□□ -1.61
LMO3-210ENST00000453727 MRPL34Q9BQ48 92 aaKnown RBP4.96□□□□□ -1.62
LMO3-210ENST00000453727 RYR1P21817 5038 aa4.95□□□□□ -1.62
LMO3-210ENST00000453727 KRTAP13-2Q52LG2 175 aa4.94□□□□□ -1.62
LMO3-210ENST00000453727 KRTAP17-1Q9BYP8 105 aa4.94□□□□□ -1.62
LMO3-210ENST00000453727 A0A1B0GVX0 72 aa4.92□□□□□ -1.62
LMO3-210ENST00000453727 KRTAP25-1Q3LHN0 102 aa4.92□□□□□ -1.62
LMO3-210ENST00000453727 Q8N1X5 172 aa4.92□□□□□ -1.62
LMO3-210ENST00000453727 SSBP3-AS1Q7Z2R9 100 aa4.92□□□□□ -1.62
LMO3-210ENST00000453727 DMAC1Q96GE9 116 aa4.92□□□□□ -1.62
LMO3-210ENST00000453727 Q96NJ1 140 aa4.9□□□□□ -1.62
LMO3-210ENST00000453727 PKHD1L1Q86WI1 4243 aa4.88□□□□□ -1.63
LMO3-210ENST00000453727 TYMSOSQ8TAI1 123 aa4.87□□□□□ -1.63
LMO3-210ENST00000453727 Q5W150 140 aa4.86□□□□□ -1.63
LMO3-210ENST00000453727 FLG2Q5D862 2391 aaPredicted RBP4.86□□□□□ -1.63
LMO3-210ENST00000453727 LRP1Q07954 4544 aaKnown RBP4.84□□□□□ -1.63
LMO3-210ENST00000453727 KRTAP4-5Q9BYR2 181 aa4.84□□□□□ -1.64
LMO3-210ENST00000453727 BIRC6Q9NR09 4857 aa4.83□□□□□ -1.64
LMO3-210ENST00000453727 NOTCH2NLQ7Z3S9 236 aa4.83□□□□□ -1.64
LMO3-210ENST00000453727 KRTAP13-3Q3SY46 172 aa4.82□□□□□ -1.64
LMO3-210ENST00000453727 MYCBP2O75592 4640 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms