RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 DSCR8Q96T75 97 aa6.2□□□□□ -1.42
HERC3-207ENST00000452979 Q6ZQT0 140 aa6.19□□□□□ -1.42
HERC3-207ENST00000452979 TEN1Q86WV5 123 aa6.19□□□□□ -1.42
HERC3-207ENST00000452979 CCKP06307 115 aa6.18□□□□□ -1.42
HERC3-207ENST00000452979 C1orf195Q5TG92 126 aa6.18□□□□□ -1.42
HERC3-207ENST00000452979 COX6B2Q6YFQ2 88 aa6.18□□□□□ -1.42
HERC3-207ENST00000452979 A0A087WSZ3 146 aa6.16□□□□□ -1.42
HERC3-207ENST00000452979 ETDBQ3ZM63 59 aa6.16□□□□□ -1.42
HERC3-207ENST00000452979 VPS25Q9BRG1 176 aa6.16□□□□□ -1.42
HERC3-207ENST00000452979 PDE6GP18545 87 aa6.14□□□□□ -1.43
HERC3-207ENST00000452979 KRTAP9-7A8MTY7 169 aa6.13□□□□□ -1.43
HERC3-207ENST00000452979 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.13□□□□□ -1.43
HERC3-207ENST00000452979 Q96NJ1 140 aa6.11□□□□□ -1.43
HERC3-207ENST00000452979 SS18L2Q9UHA2 77 aa6.1□□□□□ -1.43
HERC3-207ENST00000452979 SSPOA2VEC9 5147 aa6.09□□□□□ -1.43
HERC3-207ENST00000452979 C21orf62-AS1Q17RA5 79 aa6.08□□□□□ -1.44
HERC3-207ENST00000452979 USH2AO75445 5202 aa6.07□□□□□ -1.44
HERC3-207ENST00000452979 A0A1B0GW54 56 aa6.07□□□□□ -1.44
HERC3-207ENST00000452979 LINC00472Q9H8W2 130 aa6.06□□□□□ -1.44
HERC3-207ENST00000452979 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
HERC3-207ENST00000452979 DEFB116Q30KQ4 102 aa6.04□□□□□ -1.44
HERC3-207ENST00000452979 LINC00846Q9NV44 126 aa6.04□□□□□ -1.44
HERC3-207ENST00000452979 ATP11AUNQ6ZP68 121 aa6.03□□□□□ -1.44
HERC3-207ENST00000452979 Q75L30 129 aa6.03□□□□□ -1.44
HERC3-207ENST00000452979 Q6ZVQ6 151 aa6.02□□□□□ -1.45
HERC3-207ENST00000452979 IGKV4-1P06312 121 aa6.01□□□□□ -1.45
HERC3-207ENST00000452979 SIGMAR1Q99720 223 aa6.01□□□□□ -1.45
HERC3-207ENST00000452979 NREPQ16612 68 aa6□□□□□ -1.45
HERC3-207ENST00000452979 FAM240AA0A1B0GVK7 77 aa5.99□□□□□ -1.45
HERC3-207ENST00000452979 J3KT08 172 aa5.97□□□□□ -1.45
HERC3-207ENST00000452979 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.46
HERC3-207ENST00000452979 DSCR10P59022 87 aa5.96□□□□□ -1.46
HERC3-207ENST00000452979 UBL5Q9BZL1 73 aa5.96□□□□□ -1.46
HERC3-207ENST00000452979 ACYP1P07311 99 aa5.95□□□□□ -1.46
HERC3-207ENST00000452979 IGKV3D-7A0A0C4DH55 119 aa5.94□□□□□ -1.46
HERC3-207ENST00000452979 A0A1B0GVX0 72 aa5.94□□□□□ -1.46
HERC3-207ENST00000452979 A8MWP4 228 aa5.94□□□□□ -1.46
HERC3-207ENST00000452979 LCE2BO14633 110 aa5.94□□□□□ -1.46
HERC3-207ENST00000452979 NOTCH2NLQ7Z3S9 236 aa5.94□□□□□ -1.46
HERC3-207ENST00000452979 IGHV6-1A0A0B4J1U7 121 aa5.93□□□□□ -1.46
HERC3-207ENST00000452979 K7EQZ3 153 aa5.93□□□□□ -1.46
HERC3-207ENST00000452979 BPY2O14599 106 aa5.93□□□□□ -1.46
HERC3-207ENST00000452979 Q8N9L7 120 aa5.92□□□□□ -1.46
HERC3-207ENST00000452979 C20orf166-AS1Q96NR2 134 aa5.92□□□□□ -1.46
HERC3-207ENST00000452979 KRTAP16-1A8MUX0 517 aa5.91□□□□□ -1.46
HERC3-207ENST00000452979 MT2AP02795 61 aa5.91□□□□□ -1.46
HERC3-207ENST00000452979 PRR15Q8IV56 129 aa5.91□□□□□ -1.46
HERC3-207ENST00000452979 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
HERC3-207ENST00000452979 A8MUU9 505 aa5.9□□□□□ -1.46
HERC3-207ENST00000452979 J3QR89 54 aa5.9□□□□□ -1.46
HERC3-207ENST00000452979 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
HERC3-207ENST00000452979 NDUFB1O75438 58 aa5.89□□□□□ -1.47
HERC3-207ENST00000452979 MMP24-AS1A0A0U1RRL7 71 aa5.88□□□□□ -1.47
HERC3-207ENST00000452979 C8orf87E5RJ46 101 aa5.88□□□□□ -1.47
HERC3-207ENST00000452979 LINC00313P59037 77 aa5.88□□□□□ -1.47
HERC3-207ENST00000452979 CXCL6P80162 114 aa5.88□□□□□ -1.47
HERC3-207ENST00000452979 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
HERC3-207ENST00000452979 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
HERC3-207ENST00000452979 K7ERU9 68 aa5.86□□□□□ -1.47
HERC3-207ENST00000452979 ATP5EP2Q5VTU8 51 aa5.86□□□□□ -1.47
HERC3-207ENST00000452979 KRTAP9-3Q9BYQ3 159 aa5.86□□□□□ -1.47
HERC3-207ENST00000452979 MT1FP04733 61 aa5.85□□□□□ -1.47
HERC3-207ENST00000452979 LINC00643Q86TS7 51 aa5.85□□□□□ -1.47
HERC3-207ENST00000452979 WFDC13Q8IUB5 93 aa5.81□□□□□ -1.48
HERC3-207ENST00000452979 hDV103S1A0JD37 113 aa5.8□□□□□ -1.48
HERC3-207ENST00000452979 KRTAP10-10P60014 251 aa5.8□□□□□ -1.48
HERC3-207ENST00000452979 MPLKIPQ8TAP9 179 aa5.8□□□□□ -1.48
HERC3-207ENST00000452979 TMEM254Q8TBM7 123 aa5.8□□□□□ -1.48
HERC3-207ENST00000452979 HCG22E2RYF7 251 aa5.79□□□□□ -1.48
HERC3-207ENST00000452979 Q8N9P0 234 aaPredicted RBP5.79□□□□□ -1.48
HERC3-207ENST00000452979 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
HERC3-207ENST00000452979 A0A087WVE0 104 aa5.78□□□□□ -1.48
HERC3-207ENST00000452979 FAM236DA0A1B0GTK5 79 aa5.78□□□□□ -1.48
HERC3-207ENST00000452979 FAM236CP0DP71 79 aa5.78□□□□□ -1.48
HERC3-207ENST00000452979 CASC2Q6XLA1 102 aa5.78□□□□□ -1.48
HERC3-207ENST00000452979 HIST1H4AP62805 103 aaKnown RBP5.77□□□□□ -1.49
HERC3-207ENST00000452979 HRES1P13985 223 aa5.76□□□□□ -1.49
HERC3-207ENST00000452979 RBM12B-AS1Q9P1G2 102 aa5.76□□□□□ -1.49
HERC3-207ENST00000452979 MT-ATP8P03928 68 aa5.75□□□□□ -1.49
HERC3-207ENST00000452979 KRTAP19-6Q3LI70 58 aa5.75□□□□□ -1.49
HERC3-207ENST00000452979 NDUFS5O43920 106 aa5.72□□□□□ -1.49
HERC3-207ENST00000452979 ZCCHC13Q8WW36 166 aaKnown RBP5.71□□□□□ -1.5
HERC3-207ENST00000452979 Q5W150 140 aa5.68□□□□□ -1.5
HERC3-207ENST00000452979 IMUPQ9GZP8 106 aa5.67□□□□□ -1.5
HERC3-207ENST00000452979 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
HERC3-207ENST00000452979 OCR1Q9BZK8 76 aa5.62□□□□□ -1.51
HERC3-207ENST00000452979 TP53AIP1Q9HCN2 124 aa5.62□□□□□ -1.51
HERC3-207ENST00000452979 FAM236AA0A1B0GUQ0 79 aa5.61□□□□□ -1.51
HERC3-207ENST00000452979 FAM236BA0A1B0GV22 79 aa5.61□□□□□ -1.51
HERC3-207ENST00000452979 SPINK7P58062 85 aa5.59□□□□□ -1.51
HERC3-207ENST00000452979 UQCRQO14949 82 aa5.58□□□□□ -1.52
HERC3-207ENST00000452979 TRAV22A0A0B4J277 110 aa5.57□□□□□ -1.52
HERC3-207ENST00000452979 IGKV2D-30A0A075B6S6 120 aa5.56□□□□□ -1.52
HERC3-207ENST00000452979 IGKV2-30P06310 120 aa5.56□□□□□ -1.52
HERC3-207ENST00000452979 SCGB1A1P11684 91 aa5.55□□□□□ -1.52
HERC3-207ENST00000452979 C7orf65Q6ZTY9 151 aa5.55□□□□□ -1.52
HERC3-207ENST00000452979 NEBP20929 6669 aa5.55□□□□□ -1.52
HERC3-207ENST00000452979 H0Y9P7 68 aa5.54□□□□□ -1.52
HERC3-207ENST00000452979 ATOX1O00244 68 aa5.51□□□□□ -1.53
HERC3-207ENST00000452979 TRAV7A0A075B6U4 112 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms