RNA–Protein interactions for RNA: ENST00000452382.1

PMS1-218, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-218ENST00000452382 NRXN3Q9Y4C0 1643 aa0.2□□□□□ -2.38
PMS1-218ENST00000452382 TNXBP22105 4242 aa0.19□□□□□ -2.38
PMS1-218ENST00000452382 MTORP42345 2549 aa0.19□□□□□ -2.38
PMS1-218ENST00000452382 COL7A1Q02388 2944 aa0.19□□□□□ -2.38
PMS1-218ENST00000452382 NSD1Q96L73 2696 aaPredicted RBP0.19□□□□□ -2.38
PMS1-218ENST00000452382 MYCBP2O75592 4640 aa0.19□□□□□ -2.38
PMS1-218ENST00000452382 IGLV5-48A0A075B6I7 105 aa0.19□□□□□ -2.38
PMS1-218ENST00000452382 LYSTQ99698 3801 aa0.19□□□□□ -2.38
PMS1-218ENST00000452382 SMIM2Q9BVW6 85 aa0.19□□□□□ -2.38
PMS1-218ENST00000452382 CACNA1AO00555 2505 aa0.19□□□□□ -2.38
PMS1-218ENST00000452382 HECTD4Q9Y4D8 3996 aa0.19□□□□□ -2.38
PMS1-218ENST00000452382 NF1P21359 2839 aa0.19□□□□□ -2.38
PMS1-218ENST00000452382 ZZEF1O43149 2961 aa0.18□□□□□ -2.38
PMS1-218ENST00000452382 FAM208AQ9UK61 1670 aaKnown RBP0.18□□□□□ -2.38
PMS1-218ENST00000452382 FLNCQ14315 2725 aa0.18□□□□□ -2.38
PMS1-218ENST00000452382 ACACAQ13085 2346 aa0.18□□□□□ -2.38
PMS1-218ENST00000452382 SPRR2BP35325 72 aa0.18□□□□□ -2.38
PMS1-218ENST00000452382 DEFB110Q30KQ9 67 aa0.18□□□□□ -2.38
PMS1-218ENST00000452382 KMT2AQ03164 3969 aa0.18□□□□□ -2.38
PMS1-218ENST00000452382 LRRK2Q5S007 2527 aa0.18□□□□□ -2.38
PMS1-218ENST00000452382 SRRM2Q9UQ35 2752 aaKnown RBP0.17□□□□□ -2.38
PMS1-218ENST00000452382 MMP24-AS1A0A0U1RRL7 71 aa0.17□□□□□ -2.38
PMS1-218ENST00000452382 M0QY20 66 aa0.17□□□□□ -2.38
PMS1-218ENST00000452382 SPRR2GQ9BYE4 73 aa0.17□□□□□ -2.38
PMS1-218ENST00000452382 LPAP08519 4548 aa0.17□□□□□ -2.38
PMS1-218ENST00000452382 FAM186AA6NE01 2351 aa0.16□□□□□ -2.38
PMS1-218ENST00000452382 ZANQ9Y493 2812 aa0.16□□□□□ -2.38
PMS1-218ENST00000452382 HSPG2P98160 4391 aa0.16□□□□□ -2.38
PMS1-218ENST00000452382 GCN1Q92616 2671 aaKnown RBP0.16□□□□□ -2.38
PMS1-218ENST00000452382 IQGAP1P46940 1657 aa0.15□□□□□ -2.39
PMS1-218ENST00000452382 DMXL1Q9Y485 3027 aa0.15□□□□□ -2.39
PMS1-218ENST00000452382 LINC01546A6NGU7 62 aa0.15□□□□□ -2.39
PMS1-218ENST00000452382 DEFB131AP59861 70 aa0.15□□□□□ -2.39
PMS1-218ENST00000452382 CCDC168Q8NDH2 2452 aa0.15□□□□□ -2.39
PMS1-218ENST00000452382 KIF21BO75037 1637 aa0.15□□□□□ -2.39
PMS1-218ENST00000452382 SETD2Q9BYW2 2564 aaPredicted RBP0.15□□□□□ -2.39
PMS1-218ENST00000452382 SONP18583 2426 aaKnown RBP0.15□□□□□ -2.39
PMS1-218ENST00000452382 IQGAP2Q13576 1575 aa0.15□□□□□ -2.39
PMS1-218ENST00000452382 CUBNO60494 3623 aa0.14□□□□□ -2.39
PMS1-218ENST00000452382 COL6A3P12111 3177 aa0.14□□□□□ -2.39
PMS1-218ENST00000452382 A8MTW9 85 aa0.14□□□□□ -2.39
PMS1-218ENST00000452382 TNP1P09430 55 aa0.14□□□□□ -2.39
PMS1-218ENST00000452382 M0QZ58 72 aa0.13□□□□□ -2.39
PMS1-218ENST00000452382 EPG5Q9HCE0 2579 aa0.13□□□□□ -2.39
PMS1-218ENST00000452382 NBEAL1Q6ZS30 2694 aa0.13□□□□□ -2.39
PMS1-218ENST00000452382 TENM2Q9NT68 2774 aa0.13□□□□□ -2.39
PMS1-218ENST00000452382 A0A0C4DFX4 3053 aa0.13□□□□□ -2.39
PMS1-218ENST00000452382 SVEP1Q4LDE5 3571 aa0.13□□□□□ -2.39
PMS1-218ENST00000452382 HTTP42858 3142 aa0.13□□□□□ -2.39
PMS1-218ENST00000452382 CLTCL1P53675 1640 aa0.13□□□□□ -2.39
PMS1-218ENST00000452382 UTP20O75691 2785 aaKnown RBP0.12□□□□□ -2.39
PMS1-218ENST00000452382 FLGP20930 4061 aaPredicted RBP0.12□□□□□ -2.39
PMS1-218ENST00000452382 FASNP49327 2511 aaKnown RBP0.12□□□□□ -2.39
PMS1-218ENST00000452382 NDUFA1O15239 70 aa0.12□□□□□ -2.39
PMS1-218ENST00000452382 SPRR2AP35326 72 aa0.12□□□□□ -2.39
PMS1-218ENST00000452382 STAB2Q8WWQ8 2551 aa0.12□□□□□ -2.39
PMS1-218ENST00000452382 RIF1Q5UIP0 2472 aaKnown RBP0.12□□□□□ -2.39
PMS1-218ENST00000452382 HMCN2Q8NDA2 5059 aa0.12□□□□□ -2.39
PMS1-218ENST00000452382 COL6A5A8TX70 2615 aa0.12□□□□□ -2.39
PMS1-218ENST00000452382 ANKHD1Q8IWZ3 2542 aaKnown RBP0.12□□□□□ -2.39
PMS1-218ENST00000452382 NBEAL2Q6ZNJ1 2754 aa0.11□□□□□ -2.39
PMS1-218ENST00000452382 AKAP9Q99996 3911 aa0.11□□□□□ -2.39
PMS1-218ENST00000452382 PDZD2O15018 2839 aa0.11□□□□□ -2.39
PMS1-218ENST00000452382 HIVEP1P15822 2718 aa0.11□□□□□ -2.39
PMS1-218ENST00000452382 KALRNO60229 2985 aa0.11□□□□□ -2.39
PMS1-218ENST00000452382 VPS13BQ7Z7G8 4022 aa0.11□□□□□ -2.39
PMS1-218ENST00000452382 SPART-AS1P0CW21 52 aa0.11□□□□□ -2.39
PMS1-218ENST00000452382 KRTAP6-2Q3LI66 62 aa0.11□□□□□ -2.39
PMS1-218ENST00000452382 ANKRD11Q6UB99 2663 aaPredicted RBP0.11□□□□□ -2.39
PMS1-218ENST00000452382 MAP1AP78559 2803 aaPredicted RBP0.11□□□□□ -2.39
PMS1-218ENST00000452382 NBEAQ8NFP9 2946 aa0.1□□□□□ -2.39
PMS1-218ENST00000452382 SPENQ96T58 3664 aaKnown RBP0.1□□□□□ -2.39
PMS1-218ENST00000452382 STAB1Q9NY15 2570 aa0.1□□□□□ -2.39
PMS1-218ENST00000452382 TGP01266 2768 aa0.1□□□□□ -2.39
PMS1-218ENST00000452382 NFAT5O94916 1531 aa0.1□□□□□ -2.39
PMS1-218ENST00000452382 LRP1BQ9NZR2 4599 aa0.1□□□□□ -2.39
PMS1-218ENST00000452382 CLPSL2Q6UWE3 100 aa0.1□□□□□ -2.39
PMS1-218ENST00000452382 ACACBO00763 2458 aa0.1□□□□□ -2.39
PMS1-218ENST00000452382 TRPM2O94759 1503 aa0.09□□□□□ -2.39
PMS1-218ENST00000452382 POLR2KP53803 58 aaKnown RBP0.09□□□□□ -2.4
PMS1-218ENST00000452382 MYO18BQ8IUG5 2567 aa0.08□□□□□ -2.4
PMS1-218ENST00000452382 COL12A1Q99715 3063 aa0.08□□□□□ -2.4
PMS1-218ENST00000452382 TACC2O95359 2948 aa0.08□□□□□ -2.4
PMS1-218ENST00000452382 MXRA5Q9NR99 2828 aa0.08□□□□□ -2.4
PMS1-218ENST00000452382 RANBP2P49792 3224 aaKnown RBP0.07□□□□□ -2.4
PMS1-218ENST00000452382 SPRR2EP22531 72 aa0.07□□□□□ -2.4
PMS1-218ENST00000452382 SPTBN5Q9NRC6 3674 aaKnown RBP0.07□□□□□ -2.4
PMS1-218ENST00000452382 LRP2P98164 4655 aa0.07□□□□□ -2.4
PMS1-218ENST00000452382 DNAH3Q8TD57 4116 aa0.07□□□□□ -2.4
PMS1-218ENST00000452382 PKD1P98161 4303 aa0.07□□□□□ -2.4
PMS1-218ENST00000452382 MGAM2Q2M2H8 2515 aa0.07□□□□□ -2.4
PMS1-218ENST00000452382 TEP1Q99973 2627 aaKnown RBP0.06□□□□□ -2.4
PMS1-218ENST00000452382 MT1AP04731 61 aa0.06□□□□□ -2.4
PMS1-218ENST00000452382 DNAH9Q9NYC9 4486 aa0.06□□□□□ -2.4
PMS1-218ENST00000452382 PKHD1P08F94 4074 aa0.06□□□□□ -2.4
PMS1-218ENST00000452382 PKHD1L1Q86WI1 4243 aa0.06□□□□□ -2.4
PMS1-218ENST00000452382 TLN2Q9Y4G6 2542 aa0.06□□□□□ -2.4
PMS1-218ENST00000452382 FRYQ5TBA9 3013 aa0.05□□□□□ -2.4
PMS1-218ENST00000452382 TRIOO75962 3097 aa0.05□□□□□ -2.4
PMS1-218ENST00000452382 LAMA5O15230 3695 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms