RNA–Protein interactions for RNA: ENST00000450554.6

U2AF2-202, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene U2AF2, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-202ENST00000450554 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.87□□□□□ -0.35
U2AF2-202ENST00000450554 WWC2-AS2Q96NR7 200 aa12.86□□□□□ -0.35
U2AF2-202ENST00000450554 ACYP2P14621 99 aa12.86□□□□□ -0.35
U2AF2-202ENST00000450554 LINC00483Q53H64 154 aa12.85□□□□□ -0.35
U2AF2-202ENST00000450554 C8orf87E5RJ46 101 aa12.83□□□□□ -0.36
U2AF2-202ENST00000450554 DNAH3Q8TD57 4116 aa12.81□□□□□ -0.36
U2AF2-202ENST00000450554 KRTAP13-3Q3SY46 172 aa12.79□□□□□ -0.36
U2AF2-202ENST00000450554 RETNLBQ9BQ08 111 aa12.78□□□□□ -0.36
U2AF2-202ENST00000450554 ZNF706Q9Y5V0 76 aaPredicted RBP12.78□□□□□ -0.36
U2AF2-202ENST00000450554 A0A1B0GU69 56 aa12.77□□□□□ -0.36
U2AF2-202ENST00000450554 SPACA4Q8TDM5 124 aa12.76□□□□□ -0.37
U2AF2-202ENST00000450554 APLNQ9ULZ1 77 aa12.75□□□□□ -0.37
U2AF2-202ENST00000450554 PSORS1C2Q9UIG4 136 aa12.74□□□□□ -0.37
U2AF2-202ENST00000450554 DMAC1Q96GE9 116 aa12.71□□□□□ -0.38
U2AF2-202ENST00000450554 CIRBP-AS1Q8TBR5 109 aa12.7□□□□□ -0.38
U2AF2-202ENST00000450554 PLA2G1BP04054 148 aaKnown RBP12.69□□□□□ -0.38
U2AF2-202ENST00000450554 NBDYA0A0U1RRE5 68 aa12.68□□□□□ -0.38
U2AF2-202ENST00000450554 DNAH7Q8WXX0 4024 aa12.67□□□□□ -0.38
U2AF2-202ENST00000450554 MGAM2Q2M2H8 2515 aa12.67□□□□□ -0.38
U2AF2-202ENST00000450554 IGLV5-52A0A0A0MRZ9 124 aa12.66□□□□□ -0.38
U2AF2-202ENST00000450554 ALMS1Q8TCU4 4167 aa12.66□□□□□ -0.38
U2AF2-202ENST00000450554 FRAS1Q86XX4 4008 aa12.65□□□□□ -0.38
U2AF2-202ENST00000450554 ZNF861PO60384 105 aa12.64□□□□□ -0.39
U2AF2-202ENST00000450554 Q6ZRN7 208 aaPredicted RBP12.64□□□□□ -0.39
U2AF2-202ENST00000450554 SPATA8Q6RVD6 105 aa12.63□□□□□ -0.39
U2AF2-202ENST00000450554 LINC01554Q52M75 96 aa12.63□□□□□ -0.39
U2AF2-202ENST00000450554 MIR22HGQ0VDD5 57 aa12.62□□□□□ -0.39
U2AF2-202ENST00000450554 RTL8CO15255 209 aa12.6□□□□□ -0.39
U2AF2-202ENST00000450554 DNAH8Q96JB1 4490 aa12.59□□□□□ -0.39
U2AF2-202ENST00000450554 UQCR11O14957 56 aa12.57□□□□□ -0.4
U2AF2-202ENST00000450554 C4orf48Q5BLP8 95 aa12.56□□□□□ -0.4
U2AF2-202ENST00000450554 FAM229AH3BQW9 127 aa12.54□□□□□ -0.4
U2AF2-202ENST00000450554 IGKV2-30P06310 120 aa12.51□□□□□ -0.41
U2AF2-202ENST00000450554 A0A087WTM6 91 aa12.51□□□□□ -0.41
U2AF2-202ENST00000450554 CSAG1Q6PB30 78 aa12.47□□□□□ -0.41
U2AF2-202ENST00000450554 PLECQ15149 4684 aaKnown RBP12.46□□□□□ -0.41
U2AF2-202ENST00000450554 IGKV2D-30A0A075B6S6 120 aa12.46□□□□□ -0.41
U2AF2-202ENST00000450554 IGLV7-43P04211 117 aa12.42□□□□□ -0.42
U2AF2-202ENST00000450554 SPINK1P00995 79 aa12.37□□□□□ -0.43
U2AF2-202ENST00000450554 SSBP3-AS1Q7Z2R9 100 aa12.36□□□□□ -0.43
U2AF2-202ENST00000450554 H3BS24 57 aa12.33□□□□□ -0.44
U2AF2-202ENST00000450554 HECTD4Q9Y4D8 3996 aa12.32□□□□□ -0.44
U2AF2-202ENST00000450554 DYNC2H1Q8NCM8 4307 aaKnown RBP12.31□□□□□ -0.44
U2AF2-202ENST00000450554 DNAH17Q9UFH2 4485 aa12.31□□□□□ -0.44
U2AF2-202ENST00000450554 NUPR2A6NF83 97 aa12.31□□□□□ -0.44
U2AF2-202ENST00000450554 TGP01266 2768 aa12.3□□□□□ -0.44
U2AF2-202ENST00000450554 KRTAP16-1A8MUX0 517 aa12.29□□□□□ -0.44
U2AF2-202ENST00000450554 MEGF8Q7Z7M0 2845 aa12.24□□□□□ -0.45
U2AF2-202ENST00000450554 Q8N1X5 172 aa12.23□□□□□ -0.45
U2AF2-202ENST00000450554 KRTAP13-2Q52LG2 175 aa12.21□□□□□ -0.45
U2AF2-202ENST00000450554 FBN3Q75N90 2809 aa12.19□□□□□ -0.46
U2AF2-202ENST00000450554 VPS13DQ5THJ4 4388 aa12.17□□□□□ -0.46
U2AF2-202ENST00000450554 STARD9Q9P2P6 4700 aa12.16□□□□□ -0.46
U2AF2-202ENST00000450554 KMT2AQ03164 3969 aa12.14□□□□□ -0.47
U2AF2-202ENST00000450554 DNAH2Q9P225 4427 aa12.13□□□□□ -0.47
U2AF2-202ENST00000450554 H0YAA0 97 aa12.06□□□□□ -0.48
U2AF2-202ENST00000450554 Q6ZSA8 131 aa12.06□□□□□ -0.48
U2AF2-202ENST00000450554 C1orf134Q5TEV5 83 aa12.05□□□□□ -0.48
U2AF2-202ENST00000450554 LY6G6CO95867 125 aa12.04□□□□□ -0.48
U2AF2-202ENST00000450554 A8MUU9 505 aa12.02□□□□□ -0.49
U2AF2-202ENST00000450554 TYMSOSQ8TAI1 123 aa12.01□□□□□ -0.49
U2AF2-202ENST00000450554 DNAH11Q96DT5 4516 aa12.01□□□□□ -0.49
U2AF2-202ENST00000450554 DNAH6Q9C0G6 4158 aa12.01□□□□□ -0.49
U2AF2-202ENST00000450554 LINC00304Q8N9R0 145 aa11.98□□□□□ -0.49
U2AF2-202ENST00000450554 KRTAP10-2P60368 255 aa11.97□□□□□ -0.49
U2AF2-202ENST00000450554 KRTAP25-1Q3LHN0 102 aa11.97□□□□□ -0.49
U2AF2-202ENST00000450554 FLG2Q5D862 2391 aaPredicted RBP11.94□□□□□ -0.5
U2AF2-202ENST00000450554 PRKDCP78527 4128 aaKnown RBP11.92□□□□□ -0.5
U2AF2-202ENST00000450554 KRTAP1-4P0C5Y4 121 aa11.91□□□□□ -0.5
U2AF2-202ENST00000450554 A0A1B0GU33 70 aa11.91□□□□□ -0.5
U2AF2-202ENST00000450554 CRIPTQ9P021 101 aa11.89□□□□□ -0.51
U2AF2-202ENST00000450554 LRP1BQ9NZR2 4599 aa11.86□□□□□ -0.51
U2AF2-202ENST00000450554 ROMO1P60602 79 aa11.84□□□□□ -0.51
U2AF2-202ENST00000450554 DNAH5Q8TE73 4624 aa11.82□□□□□ -0.52
U2AF2-202ENST00000450554 H1FX-AS1Q4G0G2 97 aa11.81□□□□□ -0.52
U2AF2-202ENST00000450554 KRTAP10-1P60331 282 aa11.79□□□□□ -0.52
U2AF2-202ENST00000450554 KRTAP3-1Q9BYR8 98 aa11.75□□□□□ -0.53
U2AF2-202ENST00000450554 C9orf92A6NGG3 77 aa11.74□□□□□ -0.53
U2AF2-202ENST00000450554 VPS13BQ7Z7G8 4022 aa11.67□□□□□ -0.54
U2AF2-202ENST00000450554 K7ERS5 55 aa11.66□□□□□ -0.54
U2AF2-202ENST00000450554 COX6B2Q6YFQ2 88 aa11.61□□□□□ -0.55
U2AF2-202ENST00000450554 P0C880 135 aa11.54□□□□□ -0.56
U2AF2-202ENST00000450554 C20orf166-AS1Q96NR2 134 aa11.52□□□□□ -0.56
U2AF2-202ENST00000450554 PKD1P98161 4303 aa11.48□□□□□ -0.57
U2AF2-202ENST00000450554 FAT2Q9NYQ8 4349 aa11.47□□□□□ -0.57
U2AF2-202ENST00000450554 RPS29P62273 56 aaKnown RBP11.44□□□□□ -0.58
U2AF2-202ENST00000450554 A0A0D9SG42 100 aa11.43□□□□□ -0.58
U2AF2-202ENST00000450554 KRTAP21-3Q3LHN1 58 aa11.43□□□□□ -0.58
U2AF2-202ENST00000450554 DMBT1Q9UGM3 2413 aaPredicted RBP11.4□□□□□ -0.58
U2AF2-202ENST00000450554 SPINT4Q6UDR6 99 aa11.38□□□□□ -0.59
U2AF2-202ENST00000450554 RPL37P61927 97 aaKnown RBP11.37□□□□□ -0.59
U2AF2-202ENST00000450554 HYDINQ4G0P3 5121 aa11.35□□□□□ -0.59
U2AF2-202ENST00000450554 SMR3BP02814 79 aaPredicted RBP11.34□□□□□ -0.59
U2AF2-202ENST00000450554 TPRXLQ17RH7 258 aa11.33□□□□□ -0.6
U2AF2-202ENST00000450554 KRTAP13-4Q3LI77 160 aa11.33□□□□□ -0.6
U2AF2-202ENST00000450554 C10orf95Q9H7T3 257 aa11.3□□□□□ -0.6
U2AF2-202ENST00000450554 KRTAP10-6P60371 365 aaPredicted RBP11.28□□□□□ -0.6
U2AF2-202ENST00000450554 PKHD1P08F94 4074 aa11.2□□□□□ -0.62
U2AF2-202ENST00000450554 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
U2AF2-202ENST00000450554 SACSQ9NZJ4 4579 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms