RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CSMD3Q7Z407 3707 aa7.55□□□□□ -1.2
UBE3B-204ENST00000449510 TGP01266 2768 aa7.54□□□□□ -1.2
UBE3B-204ENST00000449510 UQCR11O14957 56 aa7.54□□□□□ -1.2
UBE3B-204ENST00000449510 ZNF469Q96JG9 3925 aaPredicted RBP7.54□□□□□ -1.2
UBE3B-204ENST00000449510 Q8N1X5 172 aa7.53□□□□□ -1.2
UBE3B-204ENST00000449510 LINC01558Q9Y6Z2 57 aa7.53□□□□□ -1.2
UBE3B-204ENST00000449510 LCE6AA0A183 80 aa7.52□□□□□ -1.21
UBE3B-204ENST00000449510 ZNF861PO60384 105 aa7.52□□□□□ -1.21
UBE3B-204ENST00000449510 NUPR2A6NF83 97 aa7.51□□□□□ -1.21
UBE3B-204ENST00000449510 ADM2Q7Z4H4 148 aa7.51□□□□□ -1.21
UBE3B-204ENST00000449510 Q96NJ1 140 aa7.5□□□□□ -1.21
UBE3B-204ENST00000449510 C1orf134Q5TEV5 83 aa7.5□□□□□ -1.21
UBE3B-204ENST00000449510 FAM229AH3BQW9 127 aa7.48□□□□□ -1.21
UBE3B-204ENST00000449510 K7ERS5 55 aa7.47□□□□□ -1.21
UBE3B-204ENST00000449510 A0A087WTM6 91 aa7.47□□□□□ -1.21
UBE3B-204ENST00000449510 Q5W150 140 aa7.47□□□□□ -1.21
UBE3B-204ENST00000449510 APLNQ9ULZ1 77 aa7.45□□□□□ -1.22
UBE3B-204ENST00000449510 CRIPTQ9P021 101 aa7.45□□□□□ -1.22
UBE3B-204ENST00000449510 SPRR1BP22528 89 aa7.41□□□□□ -1.22
UBE3B-204ENST00000449510 CSAG1Q6PB30 78 aa7.41□□□□□ -1.22
UBE3B-204ENST00000449510 A6NN06 94 aa7.4□□□□□ -1.22
UBE3B-204ENST00000449510 SSBP3-AS1Q7Z2R9 100 aa7.4□□□□□ -1.22
UBE3B-204ENST00000449510 LINC01554Q52M75 96 aa7.4□□□□□ -1.22
UBE3B-204ENST00000449510 AKAP9Q99996 3911 aa7.4□□□□□ -1.23
UBE3B-204ENST00000449510 C9orf92A6NGG3 77 aa7.39□□□□□ -1.23
UBE3B-204ENST00000449510 WWC2-AS2Q96NR7 200 aa7.39□□□□□ -1.23
UBE3B-204ENST00000449510 PLA2G1BP04054 148 aaKnown RBP7.39□□□□□ -1.23
UBE3B-204ENST00000449510 IGLV7-43P04211 117 aa7.39□□□□□ -1.23
UBE3B-204ENST00000449510 H3BS24 57 aa7.38□□□□□ -1.23
UBE3B-204ENST00000449510 TYMSOSQ8TAI1 123 aa7.37□□□□□ -1.23
UBE3B-204ENST00000449510 FBN3Q75N90 2809 aa7.35□□□□□ -1.23
UBE3B-204ENST00000449510 Q6ZR54 194 aa7.33□□□□□ -1.24
UBE3B-204ENST00000449510 SMR3BP02814 79 aaPredicted RBP7.31□□□□□ -1.24
UBE3B-204ENST00000449510 A0A0D9SG42 100 aa7.28□□□□□ -1.24
UBE3B-204ENST00000449510 SPINT4Q6UDR6 99 aa7.26□□□□□ -1.25
UBE3B-204ENST00000449510 DMAC1Q96GE9 116 aa7.22□□□□□ -1.25
UBE3B-204ENST00000449510 ANK3Q12955 4377 aaKnown RBP7.2□□□□□ -1.26
UBE3B-204ENST00000449510 A0A1B0GU33 70 aa7.18□□□□□ -1.26
UBE3B-204ENST00000449510 PLAC8Q9NZF1 115 aa7.18□□□□□ -1.26
UBE3B-204ENST00000449510 KRTAP13-1Q8IUC0 172 aa7.16□□□□□ -1.26
UBE3B-204ENST00000449510 LINC00483Q53H64 154 aa7.16□□□□□ -1.26
UBE3B-204ENST00000449510 SPATA8Q6RVD6 105 aa7.15□□□□□ -1.27
UBE3B-204ENST00000449510 LINC00304Q8N9R0 145 aa7.15□□□□□ -1.27
UBE3B-204ENST00000449510 KRTAP10-2P60368 255 aa7.14□□□□□ -1.27
UBE3B-204ENST00000449510 MEGF8Q7Z7M0 2845 aa7.13□□□□□ -1.27
UBE3B-204ENST00000449510 Q6ZRN7 208 aaPredicted RBP7.11□□□□□ -1.27
UBE3B-204ENST00000449510 KRTAP10-1P60331 282 aa7.04□□□□□ -1.28
UBE3B-204ENST00000449510 KRTAP13-2Q52LG2 175 aa7.03□□□□□ -1.28
UBE3B-204ENST00000449510 ASB16-AS1Q495Z4 193 aa7.02□□□□□ -1.29
UBE3B-204ENST00000449510 H1FX-AS1Q4G0G2 97 aa6.92□□□□□ -1.3
UBE3B-204ENST00000449510 Q6ZSA8 131 aa6.9□□□□□ -1.3
UBE3B-204ENST00000449510 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
UBE3B-204ENST00000449510 KRTAP13-3Q3SY46 172 aa6.84□□□□□ -1.31
UBE3B-204ENST00000449510 H0YAA0 97 aa6.84□□□□□ -1.31
UBE3B-204ENST00000449510 ROMO1P60602 79 aa6.83□□□□□ -1.32
UBE3B-204ENST00000449510 A8MUU9 505 aa6.83□□□□□ -1.32
UBE3B-204ENST00000449510 RPL37P61927 97 aaKnown RBP6.82□□□□□ -1.32
UBE3B-204ENST00000449510 COX6B2Q6YFQ2 88 aa6.79□□□□□ -1.32
UBE3B-204ENST00000449510 DNAH10Q8IVF4 4471 aa6.78□□□□□ -1.32
UBE3B-204ENST00000449510 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
UBE3B-204ENST00000449510 KRTAP16-1A8MUX0 517 aa6.75□□□□□ -1.33
UBE3B-204ENST00000449510 NDUFAF8A1L188 74 aa6.75□□□□□ -1.33
UBE3B-204ENST00000449510 KRTAP1-4P0C5Y4 121 aa6.72□□□□□ -1.33
UBE3B-204ENST00000449510 S4R3F8 94 aa6.69□□□□□ -1.34
UBE3B-204ENST00000449510 ANK2Q01484 3957 aa6.64□□□□□ -1.35
UBE3B-204ENST00000449510 HUWE1Q7Z6Z7 4374 aaKnown RBP6.62□□□□□ -1.35
UBE3B-204ENST00000449510 LYSTQ99698 3801 aa6.59□□□□□ -1.35
UBE3B-204ENST00000449510 R4GN34 69 aa6.54□□□□□ -1.36
UBE3B-204ENST00000449510 M0QZ58 72 aa6.53□□□□□ -1.36
UBE3B-204ENST00000449510 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
UBE3B-204ENST00000449510 C20orf166-AS1Q96NR2 134 aa6.52□□□□□ -1.37
UBE3B-204ENST00000449510 P0C880 135 aa6.52□□□□□ -1.37
UBE3B-204ENST00000449510 CAMK2N1Q7Z7J9 78 aa6.5□□□□□ -1.37
UBE3B-204ENST00000449510 LUZP6Q538Z0 58 aa6.48□□□□□ -1.37
UBE3B-204ENST00000449510 DNAH9Q9NYC9 4486 aa6.46□□□□□ -1.38
UBE3B-204ENST00000449510 PLECQ15149 4684 aaKnown RBP6.45□□□□□ -1.38
UBE3B-204ENST00000449510 Q5VSD8 79 aa6.44□□□□□ -1.38
UBE3B-204ENST00000449510 TPRXLQ17RH7 258 aa6.42□□□□□ -1.38
UBE3B-204ENST00000449510 DNAH11Q96DT5 4516 aa6.39□□□□□ -1.39
UBE3B-204ENST00000449510 RPS29P62273 56 aaKnown RBP6.39□□□□□ -1.39
UBE3B-204ENST00000449510 KRTAP13-4Q3LI77 160 aa6.39□□□□□ -1.39
UBE3B-204ENST00000449510 DNAH8Q96JB1 4490 aa6.37□□□□□ -1.39
UBE3B-204ENST00000449510 FRAS1Q86XX4 4008 aa6.36□□□□□ -1.39
UBE3B-204ENST00000449510 DNAH1Q9P2D7 4330 aa6.34□□□□□ -1.39
UBE3B-204ENST00000449510 KRTAP12-2P59991 146 aa6.34□□□□□ -1.4
UBE3B-204ENST00000449510 KRTAP10-8P60410 259 aa6.31□□□□□ -1.4
UBE3B-204ENST00000449510 J3QL48 77 aa6.31□□□□□ -1.4
UBE3B-204ENST00000449510 DNAH7Q8WXX0 4024 aa6.3□□□□□ -1.4
UBE3B-204ENST00000449510 XP32Q5T750 250 aa6.29□□□□□ -1.4
UBE3B-204ENST00000449510 KRTAP10-6P60371 365 aaPredicted RBP6.27□□□□□ -1.41
UBE3B-204ENST00000449510 KMT2AQ03164 3969 aa6.27□□□□□ -1.41
UBE3B-204ENST00000449510 STARD9Q9P2P6 4700 aa6.26□□□□□ -1.41
UBE3B-204ENST00000449510 LRP1BQ9NZR2 4599 aa6.24□□□□□ -1.41
UBE3B-204ENST00000449510 A0A0A0MQY5 61 aa6.22□□□□□ -1.41
UBE3B-204ENST00000449510 CMYA5Q8N3K9 4069 aa6.22□□□□□ -1.41
UBE3B-204ENST00000449510 DNAH17Q9UFH2 4485 aa6.21□□□□□ -1.42
UBE3B-204ENST00000449510 PLAC4Q8WY50 150 aa6.19□□□□□ -1.42
UBE3B-204ENST00000449510 FAT1Q14517 4588 aa6.18□□□□□ -1.42
UBE3B-204ENST00000449510 KRTAP12-1P59990 96 aa6.17□□□□□ -1.42
UBE3B-204ENST00000449510 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms