RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 LINC00472Q9H8W2 130 aa7.51□□□□□ -1.21
PDLIM2-213ENST00000448520 LINC00846Q9NV44 126 aa7.5□□□□□ -1.21
PDLIM2-213ENST00000448520 C21orf62-AS1Q17RA5 79 aa7.49□□□□□ -1.21
PDLIM2-213ENST00000448520 A0A1B0GW54 56 aa7.48□□□□□ -1.21
PDLIM2-213ENST00000448520 IGKV4-1P06312 121 aa7.48□□□□□ -1.21
PDLIM2-213ENST00000448520 PCP4P48539 62 aa7.47□□□□□ -1.21
PDLIM2-213ENST00000448520 Q6ZVQ6 151 aa7.47□□□□□ -1.21
PDLIM2-213ENST00000448520 SIGMAR1Q99720 223 aa7.47□□□□□ -1.21
PDLIM2-213ENST00000448520 SCGB1A1P11684 91 aa7.46□□□□□ -1.22
PDLIM2-213ENST00000448520 NREPQ16612 68 aa7.46□□□□□ -1.22
PDLIM2-213ENST00000448520 LCE2CQ5TA81 110 aa7.46□□□□□ -1.22
PDLIM2-213ENST00000448520 PCOTHQ58A44 107 aa7.45□□□□□ -1.22
PDLIM2-213ENST00000448520 CRCT1Q9UGL9 99 aa7.45□□□□□ -1.22
PDLIM2-213ENST00000448520 C9orf92A6NGG3 77 aa7.44□□□□□ -1.22
PDLIM2-213ENST00000448520 KRTAP19-2Q3LHN2 52 aa7.42□□□□□ -1.22
PDLIM2-213ENST00000448520 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
PDLIM2-213ENST00000448520 FAM240AA0A1B0GVK7 77 aa7.4□□□□□ -1.22
PDLIM2-213ENST00000448520 UBL5Q9BZL1 73 aa7.4□□□□□ -1.22
PDLIM2-213ENST00000448520 DSCR10P59022 87 aa7.39□□□□□ -1.23
PDLIM2-213ENST00000448520 MT1HP80294 61 aa7.39□□□□□ -1.23
PDLIM2-213ENST00000448520 NOTCH2NLQ7Z3S9 236 aa7.39□□□□□ -1.23
PDLIM2-213ENST00000448520 J3KT08 172 aa7.38□□□□□ -1.23
PDLIM2-213ENST00000448520 BPY2O14599 106 aa7.38□□□□□ -1.23
PDLIM2-213ENST00000448520 ACYP1P07311 99 aa7.38□□□□□ -1.23
PDLIM2-213ENST00000448520 IGHV6-1A0A0B4J1U7 121 aa7.37□□□□□ -1.23
PDLIM2-213ENST00000448520 IGKV3D-7A0A0C4DH55 119 aa7.37□□□□□ -1.23
PDLIM2-213ENST00000448520 Q8N9L7 120 aa7.37□□□□□ -1.23
PDLIM2-213ENST00000448520 A0A1B0GVX0 72 aa7.36□□□□□ -1.23
PDLIM2-213ENST00000448520 A8MWP4 228 aa7.36□□□□□ -1.23
PDLIM2-213ENST00000448520 K7EQZ3 153 aa7.35□□□□□ -1.23
PDLIM2-213ENST00000448520 NDUFB1O75438 58 aa7.32□□□□□ -1.24
PDLIM2-213ENST00000448520 PRR15Q8IV56 129 aa7.32□□□□□ -1.24
PDLIM2-213ENST00000448520 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
PDLIM2-213ENST00000448520 KRTAP16-1A8MUX0 517 aa7.3□□□□□ -1.24
PDLIM2-213ENST00000448520 LINC00313P59037 77 aa7.3□□□□□ -1.24
PDLIM2-213ENST00000448520 KRTAP10-6P60371 365 aaPredicted RBP7.3□□□□□ -1.24
PDLIM2-213ENST00000448520 RPL37P61927 97 aaKnown RBP7.3□□□□□ -1.24
PDLIM2-213ENST00000448520 C8orf17Q9NRJ1 99 aa7.3□□□□□ -1.24
PDLIM2-213ENST00000448520 M0R2T5 61 aa7.29□□□□□ -1.24
PDLIM2-213ENST00000448520 C8orf87E5RJ46 101 aa7.28□□□□□ -1.24
PDLIM2-213ENST00000448520 MMP24-AS1A0A0U1RRL7 71 aa7.27□□□□□ -1.25
PDLIM2-213ENST00000448520 CXCL6P80162 114 aa7.27□□□□□ -1.25
PDLIM2-213ENST00000448520 COX6B2Q6YFQ2 88 aa7.27□□□□□ -1.25
PDLIM2-213ENST00000448520 LINC00643Q86TS7 51 aa7.27□□□□□ -1.25
PDLIM2-213ENST00000448520 WFDC13Q8IUB5 93 aa7.24□□□□□ -1.25
PDLIM2-213ENST00000448520 MT-ATP8P03928 68 aa7.23□□□□□ -1.25
PDLIM2-213ENST00000448520 ATP5EP2Q5VTU8 51 aa7.23□□□□□ -1.25
PDLIM2-213ENST00000448520 A8MUU9 505 aa7.21□□□□□ -1.26
PDLIM2-213ENST00000448520 C20orf166-AS1Q96NR2 134 aa7.21□□□□□ -1.26
PDLIM2-213ENST00000448520 FLGP20930 4061 aaPredicted RBP7.21□□□□□ -1.26
PDLIM2-213ENST00000448520 HIST1H4AP62805 103 aaKnown RBP7.2□□□□□ -1.26
PDLIM2-213ENST00000448520 hDV103S1A0JD37 113 aa7.19□□□□□ -1.26
PDLIM2-213ENST00000448520 HCG22E2RYF7 251 aa7.19□□□□□ -1.26
PDLIM2-213ENST00000448520 CASC2Q6XLA1 102 aa7.19□□□□□ -1.26
PDLIM2-213ENST00000448520 Q75L30 129 aa7.19□□□□□ -1.26
PDLIM2-213ENST00000448520 TMEM254Q8TBM7 123 aa7.19□□□□□ -1.26
PDLIM2-213ENST00000448520 IMUPQ9GZP8 106 aa7.19□□□□□ -1.26
PDLIM2-213ENST00000448520 A0A087WVE0 104 aa7.18□□□□□ -1.26
PDLIM2-213ENST00000448520 MRPL34Q9BQ48 92 aaKnown RBP7.18□□□□□ -1.26
PDLIM2-213ENST00000448520 ATP11AUNQ6ZP68 121 aa7.17□□□□□ -1.26
PDLIM2-213ENST00000448520 Q8N9P0 234 aaPredicted RBP7.16□□□□□ -1.26
PDLIM2-213ENST00000448520 NDUFS5O43920 106 aa7.13□□□□□ -1.27
PDLIM2-213ENST00000448520 ZCCHC13Q8WW36 166 aaKnown RBP7.08□□□□□ -1.28
PDLIM2-213ENST00000448520 ANAPC13Q9BS18 74 aa7.08□□□□□ -1.28
PDLIM2-213ENST00000448520 Q5W150 140 aa7.06□□□□□ -1.28
PDLIM2-213ENST00000448520 FAM236AA0A1B0GUQ0 79 aa6.98□□□□□ -1.29
PDLIM2-213ENST00000448520 FAM236BA0A1B0GV22 79 aa6.98□□□□□ -1.29
PDLIM2-213ENST00000448520 KRTAP9-8Q9BYQ0 159 aa6.98□□□□□ -1.29
PDLIM2-213ENST00000448520 ATOX1O00244 68 aa6.96□□□□□ -1.3
PDLIM2-213ENST00000448520 OCR1Q9BZK8 76 aa6.96□□□□□ -1.3
PDLIM2-213ENST00000448520 TP53AIP1Q9HCN2 124 aa6.96□□□□□ -1.3
PDLIM2-213ENST00000448520 SPINK7P58062 85 aa6.94□□□□□ -1.3
PDLIM2-213ENST00000448520 IGKV2D-30A0A075B6S6 120 aa6.93□□□□□ -1.3
PDLIM2-213ENST00000448520 UQCRQO14949 82 aa6.93□□□□□ -1.3
PDLIM2-213ENST00000448520 IGKV2-30P06310 120 aa6.93□□□□□ -1.3
PDLIM2-213ENST00000448520 KRTAP9-7A8MTY7 169 aa6.92□□□□□ -1.3
PDLIM2-213ENST00000448520 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
PDLIM2-213ENST00000448520 TRAV22A0A0B4J277 110 aa6.9□□□□□ -1.3
PDLIM2-213ENST00000448520 H0Y9P7 68 aa6.9□□□□□ -1.3
PDLIM2-213ENST00000448520 HRES1P13985 223 aa6.9□□□□□ -1.3
PDLIM2-213ENST00000448520 CCDC179H3BU77 68 aa6.89□□□□□ -1.31
PDLIM2-213ENST00000448520 FAM236DA0A1B0GTK5 79 aa6.88□□□□□ -1.31
PDLIM2-213ENST00000448520 FAM236CP0DP71 79 aa6.88□□□□□ -1.31
PDLIM2-213ENST00000448520 COX7CP15954 63 aa6.88□□□□□ -1.31
PDLIM2-213ENST00000448520 C7orf65Q6ZTY9 151 aa6.87□□□□□ -1.31
PDLIM2-213ENST00000448520 RBM12B-AS1Q9P1G2 102 aa6.86□□□□□ -1.31
PDLIM2-213ENST00000448520 SERP2Q8N6R1 65 aa6.85□□□□□ -1.31
PDLIM2-213ENST00000448520 USH2AO75445 5202 aa6.85□□□□□ -1.31
PDLIM2-213ENST00000448520 SMIM20Q8N5G0 67 aa6.84□□□□□ -1.31
PDLIM2-213ENST00000448520 TRAV7A0A075B6U4 112 aa6.83□□□□□ -1.32
PDLIM2-213ENST00000448520 MT2AP02795 61 aa6.83□□□□□ -1.32
PDLIM2-213ENST00000448520 SSPOA2VEC9 5147 aa6.82□□□□□ -1.32
PDLIM2-213ENST00000448520 MPLKIPQ8TAP9 179 aa6.82□□□□□ -1.32
PDLIM2-213ENST00000448520 LINC00208Q96KT6 92 aa6.82□□□□□ -1.32
PDLIM2-213ENST00000448520 CYP4F30PQ9H0H9 118 aa6.82□□□□□ -1.32
PDLIM2-213ENST00000448520 C5orf47Q569G3 176 aa6.81□□□□□ -1.32
PDLIM2-213ENST00000448520 C1orf64Q8NEQ6 169 aa6.81□□□□□ -1.32
PDLIM2-213ENST00000448520 MP68P56378 58 aa6.8□□□□□ -1.32
PDLIM2-213ENST00000448520 LOC101927531A0A1B0GV80 90 aa6.79□□□□□ -1.32
PDLIM2-213ENST00000448520 KRTAP10-10P60014 251 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms