RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 WWC2-AS2Q96NR7 200 aa7.74□□□□□ -1.17
SHC1-210ENST00000448116 RETNLBQ9BQ08 111 aa7.73□□□□□ -1.17
SHC1-210ENST00000448116 IGLV5-52A0A0A0MRZ9 124 aa7.73□□□□□ -1.17
SHC1-210ENST00000448116 A0A1B0GVX0 72 aa7.73□□□□□ -1.17
SHC1-210ENST00000448116 COA5Q86WW8 74 aa7.73□□□□□ -1.17
SHC1-210ENST00000448116 A0A087X002 238 aa7.72□□□□□ -1.17
SHC1-210ENST00000448116 NOTCH2NLQ7Z3S9 236 aa7.72□□□□□ -1.17
SHC1-210ENST00000448116 TGP01266 2768 aa7.72□□□□□ -1.17
SHC1-210ENST00000448116 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
SHC1-210ENST00000448116 ZNF861PO60384 105 aa7.71□□□□□ -1.17
SHC1-210ENST00000448116 LINC00483Q53H64 154 aa7.71□□□□□ -1.17
SHC1-210ENST00000448116 Q8N9P0 234 aaPredicted RBP7.71□□□□□ -1.17
SHC1-210ENST00000448116 CIRBP-AS1Q8TBR5 109 aa7.7□□□□□ -1.18
SHC1-210ENST00000448116 IGLV7-46A0A075B6I9 117 aa7.69□□□□□ -1.18
SHC1-210ENST00000448116 MRPL34Q9BQ48 92 aaKnown RBP7.69□□□□□ -1.18
SHC1-210ENST00000448116 LIMD2Q9BT23 127 aa7.67□□□□□ -1.18
SHC1-210ENST00000448116 CDC42SE1Q9NRR8 79 aa7.66□□□□□ -1.18
SHC1-210ENST00000448116 PLAC8Q9NZF1 115 aa7.66□□□□□ -1.18
SHC1-210ENST00000448116 ASB16-AS1Q495Z4 193 aa7.66□□□□□ -1.18
SHC1-210ENST00000448116 SPAG11AQ6PDA7 123 aa7.65□□□□□ -1.18
SHC1-210ENST00000448116 Q6ZR54 194 aa7.64□□□□□ -1.19
SHC1-210ENST00000448116 C1orf134Q5TEV5 83 aa7.63□□□□□ -1.19
SHC1-210ENST00000448116 LY6G6CO95867 125 aa7.62□□□□□ -1.19
SHC1-210ENST00000448116 STARD9Q9P2P6 4700 aa7.62□□□□□ -1.19
SHC1-210ENST00000448116 IGLV7-43P04211 117 aa7.62□□□□□ -1.19
SHC1-210ENST00000448116 SPINK7P58062 85 aa7.61□□□□□ -1.19
SHC1-210ENST00000448116 DYNC2H1Q8NCM8 4307 aaKnown RBP7.61□□□□□ -1.19
SHC1-210ENST00000448116 MEGF8Q7Z7M0 2845 aa7.6□□□□□ -1.19
SHC1-210ENST00000448116 Q5W150 140 aa7.59□□□□□ -1.19
SHC1-210ENST00000448116 Q75L30 129 aa7.59□□□□□ -1.19
SHC1-210ENST00000448116 HRES1P13985 223 aa7.58□□□□□ -1.2
SHC1-210ENST00000448116 FRAS1Q86XX4 4008 aa7.57□□□□□ -1.2
SHC1-210ENST00000448116 DNAH8Q96JB1 4490 aa7.57□□□□□ -1.2
SHC1-210ENST00000448116 VPS13DQ5THJ4 4388 aa7.57□□□□□ -1.2
SHC1-210ENST00000448116 FBN3Q75N90 2809 aa7.57□□□□□ -1.2
SHC1-210ENST00000448116 CSAG1Q6PB30 78 aa7.56□□□□□ -1.2
SHC1-210ENST00000448116 KMT2AQ03164 3969 aa7.55□□□□□ -1.2
SHC1-210ENST00000448116 LOC101927531A0A1B0GV80 90 aa7.55□□□□□ -1.2
SHC1-210ENST00000448116 PRKDCP78527 4128 aaKnown RBP7.54□□□□□ -1.2
SHC1-210ENST00000448116 KRTAP10-2P60368 255 aa7.52□□□□□ -1.21
SHC1-210ENST00000448116 HECTD4Q9Y4D8 3996 aa7.51□□□□□ -1.21
SHC1-210ENST00000448116 SSBP3-AS1Q7Z2R9 100 aa7.51□□□□□ -1.21
SHC1-210ENST00000448116 LINC01558Q9Y6Z2 57 aa7.5□□□□□ -1.21
SHC1-210ENST00000448116 DNAH2Q9P225 4427 aa7.5□□□□□ -1.21
SHC1-210ENST00000448116 DNAH17Q9UFH2 4485 aa7.49□□□□□ -1.21
SHC1-210ENST00000448116 ACYP2P14621 99 aa7.44□□□□□ -1.22
SHC1-210ENST00000448116 KRTAP13-3Q3SY46 172 aa7.44□□□□□ -1.22
SHC1-210ENST00000448116 PLA2G1BP04054 148 aaKnown RBP7.44□□□□□ -1.22
SHC1-210ENST00000448116 KRTAP13-2Q52LG2 175 aa7.44□□□□□ -1.22
SHC1-210ENST00000448116 KRTAP10-1P60331 282 aa7.42□□□□□ -1.22
SHC1-210ENST00000448116 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
SHC1-210ENST00000448116 IGKV2D-30A0A075B6S6 120 aa7.4□□□□□ -1.23
SHC1-210ENST00000448116 IGKV2-30P06310 120 aa7.4□□□□□ -1.23
SHC1-210ENST00000448116 DNAH11Q96DT5 4516 aa7.39□□□□□ -1.23
SHC1-210ENST00000448116 DNAH6Q9C0G6 4158 aa7.38□□□□□ -1.23
SHC1-210ENST00000448116 ROMO1P60602 79 aa7.36□□□□□ -1.23
SHC1-210ENST00000448116 FLG2Q5D862 2391 aaPredicted RBP7.35□□□□□ -1.23
SHC1-210ENST00000448116 DMAC1Q96GE9 116 aa7.35□□□□□ -1.23
SHC1-210ENST00000448116 ALMS1Q8TCU4 4167 aa7.32□□□□□ -1.24
SHC1-210ENST00000448116 LRP1BQ9NZR2 4599 aa7.32□□□□□ -1.24
SHC1-210ENST00000448116 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
SHC1-210ENST00000448116 TYMSOSQ8TAI1 123 aa7.31□□□□□ -1.24
SHC1-210ENST00000448116 A0A1B0GU69 56 aa7.31□□□□□ -1.24
SHC1-210ENST00000448116 DNAH5Q8TE73 4624 aa7.3□□□□□ -1.24
SHC1-210ENST00000448116 KRTAP1-4P0C5Y4 121 aa7.3□□□□□ -1.24
SHC1-210ENST00000448116 KRTAP16-1A8MUX0 517 aa7.29□□□□□ -1.24
SHC1-210ENST00000448116 Q6ZSA8 131 aa7.29□□□□□ -1.24
SHC1-210ENST00000448116 P0C880 135 aa7.28□□□□□ -1.24
SHC1-210ENST00000448116 SPINK1P00995 79 aa7.26□□□□□ -1.25
SHC1-210ENST00000448116 Q8N1X5 172 aa7.22□□□□□ -1.25
SHC1-210ENST00000448116 SMR3BP02814 79 aaPredicted RBP7.21□□□□□ -1.26
SHC1-210ENST00000448116 CRIPTQ9P021 101 aa7.18□□□□□ -1.26
SHC1-210ENST00000448116 LINC00304Q8N9R0 145 aa7.18□□□□□ -1.26
SHC1-210ENST00000448116 HYDINQ4G0P3 5121 aa7.17□□□□□ -1.26
SHC1-210ENST00000448116 VPS13BQ7Z7G8 4022 aa7.16□□□□□ -1.26
SHC1-210ENST00000448116 NDUFAF8A1L188 74 aa7.16□□□□□ -1.26
SHC1-210ENST00000448116 C9orf92A6NGG3 77 aa7.16□□□□□ -1.26
SHC1-210ENST00000448116 UQCR11O14957 56 aa7.15□□□□□ -1.26
SHC1-210ENST00000448116 PKD1P98161 4303 aa7.12□□□□□ -1.27
SHC1-210ENST00000448116 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
SHC1-210ENST00000448116 FAT2Q9NYQ8 4349 aa7.1□□□□□ -1.27
SHC1-210ENST00000448116 KRTAP21-3Q3LHN1 58 aa7.08□□□□□ -1.28
SHC1-210ENST00000448116 KRTAP25-1Q3LHN0 102 aa7.03□□□□□ -1.28
SHC1-210ENST00000448116 A8MUU9 505 aa7.02□□□□□ -1.29
SHC1-210ENST00000448116 PKHD1P08F94 4074 aa7.02□□□□□ -1.29
SHC1-210ENST00000448116 KMT2CQ8NEZ4 4911 aaKnown RBP7□□□□□ -1.29
SHC1-210ENST00000448116 DMBT1Q9UGM3 2413 aaPredicted RBP7□□□□□ -1.29
SHC1-210ENST00000448116 FAT1Q14517 4588 aa6.98□□□□□ -1.29
SHC1-210ENST00000448116 RPS29P62273 56 aaKnown RBP6.98□□□□□ -1.29
SHC1-210ENST00000448116 SPINT4Q6UDR6 99 aa6.97□□□□□ -1.29
SHC1-210ENST00000448116 C20orf166-AS1Q96NR2 134 aa6.96□□□□□ -1.29
SHC1-210ENST00000448116 LUZP6Q538Z0 58 aa6.96□□□□□ -1.3
SHC1-210ENST00000448116 DYNC1H1Q14204 4646 aaKnown RBP6.94□□□□□ -1.3
SHC1-210ENST00000448116 KRTAP3-1Q9BYR8 98 aa6.93□□□□□ -1.3
SHC1-210ENST00000448116 SACSQ9NZJ4 4579 aa6.92□□□□□ -1.3
SHC1-210ENST00000448116 A0A1B0GU33 70 aa6.89□□□□□ -1.31
SHC1-210ENST00000448116 H0YAA0 97 aa6.88□□□□□ -1.31
SHC1-210ENST00000448116 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
SHC1-210ENST00000448116 A0A1B0GVY2 172 aa6.84□□□□□ -1.31
SHC1-210ENST00000448116 RYR3Q15413 4870 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms