RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 hADV29S1A0JD25 119 aa2.73□□□□□ -1.97
USP49-205ENST00000448078 C3orf79P0CE67 100 aa2.73□□□□□ -1.97
USP49-205ENST00000448078 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
USP49-205ENST00000448078 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
USP49-205ENST00000448078 UQCC3Q6UW78 93 aa2.73□□□□□ -1.97
USP49-205ENST00000448078 TEN1Q86WV5 123 aa2.73□□□□□ -1.97
USP49-205ENST00000448078 KMT2DO14686 5537 aa2.72□□□□□ -1.97
USP49-205ENST00000448078 TMEM218A2RU14 115 aa2.72□□□□□ -1.97
USP49-205ENST00000448078 IFITM1P13164 125 aa2.72□□□□□ -1.97
USP49-205ENST00000448078 SCGB1D4Q6XE38 83 aa2.72□□□□□ -1.97
USP49-205ENST00000448078 SIGMAR1Q99720 223 aa2.72□□□□□ -1.97
USP49-205ENST00000448078 COLCA2A8K830 154 aa2.71□□□□□ -1.98
USP49-205ENST00000448078 LYRM7Q5U5X0 104 aa2.71□□□□□ -1.98
USP49-205ENST00000448078 Q6ZQY7 126 aa2.71□□□□□ -1.98
USP49-205ENST00000448078 TRGC2P03986 189 aa2.7□□□□□ -1.98
USP49-205ENST00000448078 FABP4P15090 132 aa2.7□□□□□ -1.98
USP49-205ENST00000448078 SPINK7P58062 85 aa2.7□□□□□ -1.98
USP49-205ENST00000448078 DEFB116Q30KQ4 102 aa2.7□□□□□ -1.98
USP49-205ENST00000448078 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.7□□□□□ -1.98
USP49-205ENST00000448078 LINC00575Q6W349 94 aa2.7□□□□□ -1.98
USP49-205ENST00000448078 CAMK2N1Q7Z7J9 78 aa2.7□□□□□ -1.98
USP49-205ENST00000448078 KRTAP2-1Q9BYU5 128 aa2.7□□□□□ -1.98
USP49-205ENST00000448078 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
USP49-205ENST00000448078 IGKV4-1P06312 121 aa2.69□□□□□ -1.98
USP49-205ENST00000448078 PMCHL2Q9BQD1 86 aa2.69□□□□□ -1.98
USP49-205ENST00000448078 A0A087WSZ3 146 aa2.68□□□□□ -1.98
USP49-205ENST00000448078 A0A1W2PNM2 257 aa2.68□□□□□ -1.98
USP49-205ENST00000448078 Q5VV11 94 aa2.68□□□□□ -1.98
USP49-205ENST00000448078 SMIM11BQ8TCY0 68 aa2.68□□□□□ -1.98
USP49-205ENST00000448078 DSCR8Q96T75 97 aa2.68□□□□□ -1.98
USP49-205ENST00000448078 H3BUT2 72 aa2.67□□□□□ -1.98
USP49-205ENST00000448078 IMUPQ9GZP8 106 aa2.67□□□□□ -1.98
USP49-205ENST00000448078 IGHV6-1A0A0B4J1U7 121 aa2.66□□□□□ -1.98
USP49-205ENST00000448078 FAM236AA0A1B0GUQ0 79 aa2.66□□□□□ -1.98
USP49-205ENST00000448078 FAM236BA0A1B0GV22 79 aa2.66□□□□□ -1.98
USP49-205ENST00000448078 NDUFA5Q16718 116 aa2.66□□□□□ -1.98
USP49-205ENST00000448078 H1FX-AS1Q4G0G2 97 aa2.66□□□□□ -1.98
USP49-205ENST00000448078 CLLU1Q5K131 121 aa2.66□□□□□ -1.98
USP49-205ENST00000448078 BVES-AS1Q5T3Y7 98 aa2.66□□□□□ -1.98
USP49-205ENST00000448078 MUSTN1Q8IVN3 82 aa2.66□□□□□ -1.98
USP49-205ENST00000448078 ZCCHC13Q8WW36 166 aaKnown RBP2.66□□□□□ -1.98
USP49-205ENST00000448078 C8orf87E5RJ46 101 aa2.65□□□□□ -1.99
USP49-205ENST00000448078 WFDC13Q8IUB5 93 aa2.65□□□□□ -1.99
USP49-205ENST00000448078 H3BMG7 143 aa2.64□□□□□ -1.99
USP49-205ENST00000448078 SPRR2EP22531 72 aa2.63□□□□□ -1.99
USP49-205ENST00000448078 SPRR2BP35325 72 aa2.63□□□□□ -1.99
USP49-205ENST00000448078 SPRR2AP35326 72 aa2.63□□□□□ -1.99
USP49-205ENST00000448078 SYS1-DBNDD2H3BUS1 97 aa2.62□□□□□ -1.99
USP49-205ENST00000448078 NDUFB1O75438 58 aa2.62□□□□□ -1.99
USP49-205ENST00000448078 FABP2P12104 132 aa2.62□□□□□ -1.99
USP49-205ENST00000448078 SVBPQ8N300 66 aa2.62□□□□□ -1.99
USP49-205ENST00000448078 ANKRD29Q8N6D5 301 aa2.62□□□□□ -1.99
USP49-205ENST00000448078 RAB37Q96AX2 223 aa2.62□□□□□ -1.99
USP49-205ENST00000448078 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
USP49-205ENST00000448078 H0YGX0 51 aa2.61□□□□□ -1.99
USP49-205ENST00000448078 APOC3P02656 99 aa2.61□□□□□ -1.99
USP49-205ENST00000448078 SPRR2FQ96RM1 72 aa2.61□□□□□ -1.99
USP49-205ENST00000448078 TRBV7-4A0A0J9YYF1 115 aa2.6□□□□□ -1.99
USP49-205ENST00000448078 H3BQ85 93 aa2.6□□□□□ -1.99
USP49-205ENST00000448078 COA6Q5JTJ3 125 aaKnown RBP2.6□□□□□ -1.99
USP49-205ENST00000448078 IGKV3D-7A0A0C4DH55 119 aa2.59□□□□□ -1.99
USP49-205ENST00000448078 A0A1B0GVX0 72 aa2.59□□□□□ -1.99
USP49-205ENST00000448078 J3KT08 172 aa2.59□□□□□ -1.99
USP49-205ENST00000448078 C5orf47Q569G3 176 aa2.59□□□□□ -1.99
USP49-205ENST00000448078 TRACP01848 142 aa2.58□□□□□ -2
USP49-205ENST00000448078 LINC01545Q5VT33 79 aa2.58□□□□□ -2
USP49-205ENST00000448078 TTTY13Q9BZ97 58 aa2.58□□□□□ -2
USP49-205ENST00000448078 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
USP49-205ENST00000448078 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
USP49-205ENST00000448078 LINC00472Q9H8W2 130 aa2.57□□□□□ -2
USP49-205ENST00000448078 SPRR2DP22532 72 aa2.56□□□□□ -2
USP49-205ENST00000448078 CSAG1Q6PB30 78 aa2.56□□□□□ -2
USP49-205ENST00000448078 A0A1B0GX51 115 aa2.55□□□□□ -2
USP49-205ENST00000448078 CCKP06307 115 aa2.55□□□□□ -2
USP49-205ENST00000448078 MT1BP07438 61 aa2.55□□□□□ -2
USP49-205ENST00000448078 KRTAP19-8Q3LI54 63 aa2.55□□□□□ -2
USP49-205ENST00000448078 PRO2289Q9P1D8 64 aa2.55□□□□□ -2
USP49-205ENST00000448078 HSBP1L1C9JCN9 74 aa2.54□□□□□ -2
USP49-205ENST00000448078 DNAL4O96015 105 aa2.54□□□□□ -2
USP49-205ENST00000448078 KRTDAPP60985 99 aa2.54□□□□□ -2
USP49-205ENST00000448078 C2orf91Q6ZV80 131 aa2.54□□□□□ -2
USP49-205ENST00000448078 SPRR2GQ9BYE4 73 aa2.54□□□□□ -2
USP49-205ENST00000448078 TMEM256-PLSCR3K7ERE1 68 aa2.53□□□□□ -2
USP49-205ENST00000448078 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
USP49-205ENST00000448078 PRR15Q8IV56 129 aa2.53□□□□□ -2
USP49-205ENST00000448078 VPS25Q9BRG1 176 aa2.53□□□□□ -2
USP49-205ENST00000448078 CRIPTQ9P021 101 aa2.52□□□□□ -2.01
USP49-205ENST00000448078 NDUFS5O43920 106 aa2.51□□□□□ -2.01
USP49-205ENST00000448078 YPEL4Q96NS1 127 aa2.51□□□□□ -2.01
USP49-205ENST00000448078 ORMDL1Q9P0S3 153 aa2.51□□□□□ -2.01
USP49-205ENST00000448078 C8orf17Q9NRJ1 99 aa2.5□□□□□ -2.01
USP49-205ENST00000448078 A0A1B0GV72 72 aa2.49□□□□□ -2.01
USP49-205ENST00000448078 KLKP1Q107X0 134 aa2.49□□□□□ -2.01
USP49-205ENST00000448078 C7orf65Q6ZTY9 151 aa2.49□□□□□ -2.01
USP49-205ENST00000448078 S4R3F8 94 aa2.49□□□□□ -2.01
USP49-205ENST00000448078 RBM3P98179 157 aaKnown RBP2.48□□□□□ -2.01
USP49-205ENST00000448078 ATOH7Q8N100 152 aa2.48□□□□□ -2.01
USP49-205ENST00000448078 COX6CP09669 75 aa2.47□□□□□ -2.01
USP49-205ENST00000448078 C9JAW5 83 aa2.46□□□□□ -2.02
USP49-205ENST00000448078 C4orf26Q17RF5 130 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms