RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 CHTF8P0CG12 524 aa3.4□□□□□ -1.87
LMO3-209ENST00000447609 LINC01554Q52M75 96 aa3.39□□□□□ -1.87
LMO3-209ENST00000447609 LINC00472Q9H8W2 130 aa3.39□□□□□ -1.87
LMO3-209ENST00000447609 PRKDCP78527 4128 aaKnown RBP3.39□□□□□ -1.87
LMO3-209ENST00000447609 MMP24-AS1A0A0U1RRL7 71 aa3.38□□□□□ -1.87
LMO3-209ENST00000447609 ACYP2P14621 99 aa3.38□□□□□ -1.87
LMO3-209ENST00000447609 SPRR1BP22528 89 aa3.38□□□□□ -1.87
LMO3-209ENST00000447609 LINC00313P59037 77 aa3.38□□□□□ -1.87
LMO3-209ENST00000447609 PLA2G1BP04054 148 aaKnown RBP3.38□□□□□ -1.87
LMO3-209ENST00000447609 FAM168BA1KXE4 195 aa3.37□□□□□ -1.87
LMO3-209ENST00000447609 SPINK7P58062 85 aa3.37□□□□□ -1.87
LMO3-209ENST00000447609 RETNLBQ9BQ08 111 aa3.37□□□□□ -1.87
LMO3-209ENST00000447609 HRES1P13985 223 aa3.37□□□□□ -1.87
LMO3-209ENST00000447609 A0A096LNI7 61 aa3.36□□□□□ -1.87
LMO3-209ENST00000447609 KRTAP10-2P60368 255 aa3.36□□□□□ -1.87
LMO3-209ENST00000447609 PRLHP81277 87 aa3.36□□□□□ -1.87
LMO3-209ENST00000447609 C8orf17Q9NRJ1 99 aa3.36□□□□□ -1.87
LMO3-209ENST00000447609 A0A1B0GU69 56 aa3.35□□□□□ -1.87
LMO3-209ENST00000447609 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
LMO3-209ENST00000447609 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
LMO3-209ENST00000447609 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
LMO3-209ENST00000447609 MRPL34Q9BQ48 92 aaKnown RBP3.35□□□□□ -1.87
LMO3-209ENST00000447609 H3BS24 57 aa3.34□□□□□ -1.87
LMO3-209ENST00000447609 KRTAP4-8A0A0G2JLE6 195 aa3.34□□□□□ -1.88
LMO3-209ENST00000447609 A0A1B0GVX0 72 aa3.34□□□□□ -1.88
LMO3-209ENST00000447609 UQCR11O14957 56 aa3.34□□□□□ -1.88
LMO3-209ENST00000447609 ZNF706Q9Y5V0 76 aaPredicted RBP3.34□□□□□ -1.88
LMO3-209ENST00000447609 A0A0G2JQZ4 141 aa3.33□□□□□ -1.88
LMO3-209ENST00000447609 A0A1W2PNN7 141 aa3.33□□□□□ -1.88
LMO3-209ENST00000447609 Q6ZRN7 208 aaPredicted RBP3.33□□□□□ -1.88
LMO3-209ENST00000447609 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
LMO3-209ENST00000447609 IGHV6-1A0A0B4J1U7 121 aa3.32□□□□□ -1.88
LMO3-209ENST00000447609 DNAH7Q8WXX0 4024 aa3.32□□□□□ -1.88
LMO3-209ENST00000447609 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
LMO3-209ENST00000447609 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
LMO3-209ENST00000447609 CIRBP-AS1Q8TBR5 109 aa3.32□□□□□ -1.88
LMO3-209ENST00000447609 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.31□□□□□ -1.88
LMO3-209ENST00000447609 KRTAP7-1Q8IUC3 87 aa3.31□□□□□ -1.88
LMO3-209ENST00000447609 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
LMO3-209ENST00000447609 KRTAP19-4Q3LI73 84 aa3.3□□□□□ -1.88
LMO3-209ENST00000447609 PRR26Q8N8Z3 221 aa3.3□□□□□ -1.88
LMO3-209ENST00000447609 DMAC1Q96GE9 116 aa3.28□□□□□ -1.88
LMO3-209ENST00000447609 LYSTQ99698 3801 aa3.28□□□□□ -1.88
LMO3-209ENST00000447609 Q5VSD8 79 aa3.28□□□□□ -1.88
LMO3-209ENST00000447609 IGLV9-49A0A0B4J1Y8 123 aa3.28□□□□□ -1.89
LMO3-209ENST00000447609 SPACA4Q8TDM5 124 aa3.28□□□□□ -1.89
LMO3-209ENST00000447609 DNAH9Q9NYC9 4486 aa3.27□□□□□ -1.89
LMO3-209ENST00000447609 PSORS1C2Q9UIG4 136 aa3.27□□□□□ -1.89
LMO3-209ENST00000447609 DYNC2H1Q8NCM8 4307 aaKnown RBP3.26□□□□□ -1.89
LMO3-209ENST00000447609 Q96NJ1 140 aa3.26□□□□□ -1.89
LMO3-209ENST00000447609 COL7A1Q02388 2944 aa3.25□□□□□ -1.89
LMO3-209ENST00000447609 PANO1I0J062 215 aa3.25□□□□□ -1.89
LMO3-209ENST00000447609 IGLV7-43P04211 117 aa3.24□□□□□ -1.89
LMO3-209ENST00000447609 KRTAP4-7Q9BYR0 210 aa3.24□□□□□ -1.89
LMO3-209ENST00000447609 ZNF861PO60384 105 aa3.24□□□□□ -1.89
LMO3-209ENST00000447609 LINC00483Q53H64 154 aa3.24□□□□□ -1.89
LMO3-209ENST00000447609 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
LMO3-209ENST00000447609 CSAG1Q6PB30 78 aa3.24□□□□□ -1.89
LMO3-209ENST00000447609 FLG2Q5D862 2391 aaPredicted RBP3.23□□□□□ -1.89
LMO3-209ENST00000447609 ADM2Q7Z4H4 148 aa3.23□□□□□ -1.89
LMO3-209ENST00000447609 TYMSOSQ8TAI1 123 aa3.23□□□□□ -1.89
LMO3-209ENST00000447609 DNAH1Q9P2D7 4330 aa3.22□□□□□ -1.89
LMO3-209ENST00000447609 A0A1B0GVY2 172 aa3.22□□□□□ -1.89
LMO3-209ENST00000447609 Q8N1X5 172 aa3.22□□□□□ -1.89
LMO3-209ENST00000447609 SPINK6Q6UWN8 80 aa3.21□□□□□ -1.9
LMO3-209ENST00000447609 HUWE1Q7Z6Z7 4374 aaKnown RBP3.21□□□□□ -1.9
LMO3-209ENST00000447609 KMT2CQ8NEZ4 4911 aaKnown RBP3.21□□□□□ -1.9
LMO3-209ENST00000447609 K7ERS5 55 aa3.21□□□□□ -1.9
LMO3-209ENST00000447609 KRTAP13-1Q8IUC0 172 aa3.21□□□□□ -1.9
LMO3-209ENST00000447609 RYR3Q15413 4870 aa3.2□□□□□ -1.9
LMO3-209ENST00000447609 IGKV2-30P06310 120 aa3.2□□□□□ -1.9
LMO3-209ENST00000447609 Q5W150 140 aa3.2□□□□□ -1.9
LMO3-209ENST00000447609 CSMD3Q7Z407 3707 aa3.19□□□□□ -1.9
LMO3-209ENST00000447609 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
LMO3-209ENST00000447609 ANAPC11Q9NYG5 84 aa3.19□□□□□ -1.9
LMO3-209ENST00000447609 DMBT1Q9UGM3 2413 aaPredicted RBP3.19□□□□□ -1.9
LMO3-209ENST00000447609 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
LMO3-209ENST00000447609 ALMS1Q8TCU4 4167 aa3.18□□□□□ -1.9
LMO3-209ENST00000447609 Q6ZSA8 131 aa3.18□□□□□ -1.9
LMO3-209ENST00000447609 DNAH6Q9C0G6 4158 aa3.17□□□□□ -1.9
LMO3-209ENST00000447609 SSBP3-AS1Q7Z2R9 100 aa3.17□□□□□ -1.9
LMO3-209ENST00000447609 KRTAP11-1Q8IUC1 163 aa3.17□□□□□ -1.9
LMO3-209ENST00000447609 RYR2Q92736 4967 aa3.16□□□□□ -1.9
LMO3-209ENST00000447609 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
LMO3-209ENST00000447609 LINC00304Q8N9R0 145 aa3.16□□□□□ -1.9
LMO3-209ENST00000447609 NOTCH2NLQ7Z3S9 236 aa3.15□□□□□ -1.9
LMO3-209ENST00000447609 SACSQ9NZJ4 4579 aa3.15□□□□□ -1.9
LMO3-209ENST00000447609 STARD9Q9P2P6 4700 aa3.15□□□□□ -1.9
LMO3-209ENST00000447609 IGKV2D-30A0A075B6S6 120 aa3.15□□□□□ -1.91
LMO3-209ENST00000447609 ROMO1P60602 79 aa3.14□□□□□ -1.91
LMO3-209ENST00000447609 FRAS1Q86XX4 4008 aa3.12□□□□□ -1.91
LMO3-209ENST00000447609 HECTD4Q9Y4D8 3996 aa3.12□□□□□ -1.91
LMO3-209ENST00000447609 A8MUU9 505 aa3.11□□□□□ -1.91
LMO3-209ENST00000447609 SPINK1P00995 79 aa3.1□□□□□ -1.91
LMO3-209ENST00000447609 HYDINQ4G0P3 5121 aa3.1□□□□□ -1.91
LMO3-209ENST00000447609 A0A1B0GU33 70 aa3.09□□□□□ -1.91
LMO3-209ENST00000447609 PLECQ15149 4684 aaKnown RBP3.09□□□□□ -1.92
LMO3-209ENST00000447609 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
LMO3-209ENST00000447609 BIRC6Q9NR09 4857 aa3.06□□□□□ -1.92
LMO3-209ENST00000447609 H1FX-AS1Q4G0G2 97 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms