RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
VPS52-212ENST00000445902 C14orf177Q52M58 125 aa8.28□□□□□ -1.08
VPS52-212ENST00000445902 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
VPS52-212ENST00000445902 KRTAP24-1Q3LI83 254 aa8.26□□□□□ -1.09
VPS52-212ENST00000445902 MGAM2Q2M2H8 2515 aa8.26□□□□□ -1.09
VPS52-212ENST00000445902 ACYP2P14621 99 aa8.25□□□□□ -1.09
VPS52-212ENST00000445902 WWC2-AS2Q96NR7 200 aa8.25□□□□□ -1.09
VPS52-212ENST00000445902 DNAH3Q8TD57 4116 aa8.25□□□□□ -1.09
VPS52-212ENST00000445902 FRAS1Q86XX4 4008 aa8.24□□□□□ -1.09
VPS52-212ENST00000445902 A0A1B0GU69 56 aa8.23□□□□□ -1.09
VPS52-212ENST00000445902 ALMS1Q8TCU4 4167 aa8.23□□□□□ -1.09
VPS52-212ENST00000445902 KRTAP13-3Q3SY46 172 aa8.22□□□□□ -1.09
VPS52-212ENST00000445902 LINC00483Q53H64 154 aa8.22□□□□□ -1.09
VPS52-212ENST00000445902 PSORS1C2Q9UIG4 136 aa8.19□□□□□ -1.1
VPS52-212ENST00000445902 PLA2G1BP04054 148 aaKnown RBP8.17□□□□□ -1.1
VPS52-212ENST00000445902 CIRBP-AS1Q8TBR5 109 aa8.17□□□□□ -1.1
VPS52-212ENST00000445902 SPACA4Q8TDM5 124 aa8.17□□□□□ -1.1
VPS52-212ENST00000445902 LINC01554Q52M75 96 aa8.16□□□□□ -1.1
VPS52-212ENST00000445902 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
VPS52-212ENST00000445902 DMAC1Q96GE9 116 aa8.16□□□□□ -1.1
VPS52-212ENST00000445902 ZNF706Q9Y5V0 76 aaPredicted RBP8.16□□□□□ -1.1
VPS52-212ENST00000445902 APLNQ9ULZ1 77 aa8.16□□□□□ -1.1
VPS52-212ENST00000445902 DNAH8Q96JB1 4490 aa8.14□□□□□ -1.11
VPS52-212ENST00000445902 MIR22HGQ0VDD5 57 aa8.13□□□□□ -1.11
VPS52-212ENST00000445902 RTL8CO15255 209 aa8.13□□□□□ -1.11
VPS52-212ENST00000445902 SPATA8Q6RVD6 105 aa8.13□□□□□ -1.11
VPS52-212ENST00000445902 IGLV5-52A0A0A0MRZ9 124 aa8.11□□□□□ -1.11
VPS52-212ENST00000445902 NBDYA0A0U1RRE5 68 aa8.11□□□□□ -1.11
VPS52-212ENST00000445902 ZNF861PO60384 105 aa8.1□□□□□ -1.11
VPS52-212ENST00000445902 Q6ZRN7 208 aaPredicted RBP8.09□□□□□ -1.11
VPS52-212ENST00000445902 UQCR11O14957 56 aa8.09□□□□□ -1.11
VPS52-212ENST00000445902 MEGF8Q7Z7M0 2845 aa8.08□□□□□ -1.12
VPS52-212ENST00000445902 CSAG1Q6PB30 78 aa8.08□□□□□ -1.12
VPS52-212ENST00000445902 TGP01266 2768 aa8.07□□□□□ -1.12
VPS52-212ENST00000445902 PLECQ15149 4684 aaKnown RBP8.06□□□□□ -1.12
VPS52-212ENST00000445902 IGKV2D-30A0A075B6S6 120 aa8.04□□□□□ -1.12
VPS52-212ENST00000445902 IGKV2-30P06310 120 aa8.04□□□□□ -1.12
VPS52-212ENST00000445902 H3BS24 57 aa8.04□□□□□ -1.12
VPS52-212ENST00000445902 FAM229AH3BQW9 127 aa8.03□□□□□ -1.12
VPS52-212ENST00000445902 HECTD4Q9Y4D8 3996 aa8.01□□□□□ -1.13
VPS52-212ENST00000445902 A0A087WTM6 91 aa8.01□□□□□ -1.13
VPS52-212ENST00000445902 SPINK1P00995 79 aa8.01□□□□□ -1.13
VPS52-212ENST00000445902 FBN3Q75N90 2809 aa7.99□□□□□ -1.13
VPS52-212ENST00000445902 DNAH17Q9UFH2 4485 aa7.97□□□□□ -1.13
VPS52-212ENST00000445902 IGLV7-43P04211 117 aa7.96□□□□□ -1.14
VPS52-212ENST00000445902 Q8N1X5 172 aa7.9□□□□□ -1.14
VPS52-212ENST00000445902 KMT2AQ03164 3969 aa7.9□□□□□ -1.14
VPS52-212ENST00000445902 DYNC2H1Q8NCM8 4307 aaKnown RBP7.9□□□□□ -1.14
VPS52-212ENST00000445902 KRTAP16-1A8MUX0 517 aa7.89□□□□□ -1.15
VPS52-212ENST00000445902 SSBP3-AS1Q7Z2R9 100 aa7.89□□□□□ -1.15
VPS52-212ENST00000445902 STARD9Q9P2P6 4700 aa7.88□□□□□ -1.15
VPS52-212ENST00000445902 VPS13DQ5THJ4 4388 aa7.88□□□□□ -1.15
VPS52-212ENST00000445902 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
VPS52-212ENST00000445902 KRTAP13-2Q52LG2 175 aa7.85□□□□□ -1.15
VPS52-212ENST00000445902 NUPR2A6NF83 97 aa7.84□□□□□ -1.15
VPS52-212ENST00000445902 DNAH2Q9P225 4427 aa7.84□□□□□ -1.15
VPS52-212ENST00000445902 DNAH6Q9C0G6 4158 aa7.82□□□□□ -1.16
VPS52-212ENST00000445902 C1orf134Q5TEV5 83 aa7.81□□□□□ -1.16
VPS52-212ENST00000445902 H0YAA0 97 aa7.79□□□□□ -1.16
VPS52-212ENST00000445902 Q6ZSA8 131 aa7.78□□□□□ -1.16
VPS52-212ENST00000445902 TYMSOSQ8TAI1 123 aa7.77□□□□□ -1.17
VPS52-212ENST00000445902 CRIPTQ9P021 101 aa7.75□□□□□ -1.17
VPS52-212ENST00000445902 A8MUU9 505 aa7.75□□□□□ -1.17
VPS52-212ENST00000445902 LINC00304Q8N9R0 145 aa7.74□□□□□ -1.17
VPS52-212ENST00000445902 DNAH11Q96DT5 4516 aa7.74□□□□□ -1.17
VPS52-212ENST00000445902 LY6G6CO95867 125 aa7.73□□□□□ -1.17
VPS52-212ENST00000445902 KRTAP25-1Q3LHN0 102 aa7.72□□□□□ -1.17
VPS52-212ENST00000445902 KRTAP10-2P60368 255 aa7.69□□□□□ -1.18
VPS52-212ENST00000445902 PRKDCP78527 4128 aaKnown RBP7.69□□□□□ -1.18
VPS52-212ENST00000445902 A0A1B0GU33 70 aa7.66□□□□□ -1.18
VPS52-212ENST00000445902 ROMO1P60602 79 aa7.66□□□□□ -1.18
VPS52-212ENST00000445902 LRP1BQ9NZR2 4599 aa7.65□□□□□ -1.19
VPS52-212ENST00000445902 KRTAP1-4P0C5Y4 121 aa7.64□□□□□ -1.19
VPS52-212ENST00000445902 DNAH5Q8TE73 4624 aa7.64□□□□□ -1.19
VPS52-212ENST00000445902 H1FX-AS1Q4G0G2 97 aa7.6□□□□□ -1.19
VPS52-212ENST00000445902 C9orf92A6NGG3 77 aa7.58□□□□□ -1.2
VPS52-212ENST00000445902 KRTAP10-1P60331 282 aa7.57□□□□□ -1.2
VPS52-212ENST00000445902 KRTAP3-1Q9BYR8 98 aa7.57□□□□□ -1.2
VPS52-212ENST00000445902 VPS13BQ7Z7G8 4022 aa7.57□□□□□ -1.2
VPS52-212ENST00000445902 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
VPS52-212ENST00000445902 P0C880 135 aa7.5□□□□□ -1.21
VPS52-212ENST00000445902 FAT2Q9NYQ8 4349 aa7.49□□□□□ -1.21
VPS52-212ENST00000445902 COX6B2Q6YFQ2 88 aa7.48□□□□□ -1.21
VPS52-212ENST00000445902 K7ERS5 55 aa7.48□□□□□ -1.21
VPS52-212ENST00000445902 PKD1P98161 4303 aa7.45□□□□□ -1.22
VPS52-212ENST00000445902 A0A0D9SG42 100 aa7.4□□□□□ -1.22
VPS52-212ENST00000445902 DNHD1Q96M86 4753 aa7.38□□□□□ -1.23
VPS52-212ENST00000445902 C20orf166-AS1Q96NR2 134 aa7.37□□□□□ -1.23
VPS52-212ENST00000445902 SPINT4Q6UDR6 99 aa7.37□□□□□ -1.23
VPS52-212ENST00000445902 HYDINQ4G0P3 5121 aa7.37□□□□□ -1.23
VPS52-212ENST00000445902 C10orf95Q9H7T3 257 aa7.34□□□□□ -1.23
VPS52-212ENST00000445902 TPRXLQ17RH7 258 aa7.34□□□□□ -1.23
VPS52-212ENST00000445902 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
VPS52-212ENST00000445902 SMR3BP02814 79 aaPredicted RBP7.32□□□□□ -1.24
VPS52-212ENST00000445902 RPL37P61927 97 aaKnown RBP7.31□□□□□ -1.24
VPS52-212ENST00000445902 PKHD1P08F94 4074 aa7.29□□□□□ -1.24
VPS52-212ENST00000445902 RPS29P62273 56 aaKnown RBP7.26□□□□□ -1.25
VPS52-212ENST00000445902 KRTAP10-6P60371 365 aaPredicted RBP7.26□□□□□ -1.25
VPS52-212ENST00000445902 NDUFAF8A1L188 74 aa7.22□□□□□ -1.25
VPS52-212ENST00000445902 KRTAP3-3Q9BYR6 98 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms