RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 FAM104BQ5XKR9 115 aa2.72□□□□□ -1.97
BRAFP1-201ENST00000445336 CLEC2BQ92478 149 aa2.72□□□□□ -1.97
BRAFP1-201ENST00000445336 KRTAP16-1A8MUX0 517 aa2.72□□□□□ -1.97
BRAFP1-201ENST00000445336 KRTDAPP60985 99 aa2.72□□□□□ -1.97
BRAFP1-201ENST00000445336 HERVK_113P61574 105 aa2.72□□□□□ -1.97
BRAFP1-201ENST00000445336 LCE5AQ5TCM9 118 aa2.72□□□□□ -1.97
BRAFP1-201ENST00000445336 COX17Q14061 63 aa2.71□□□□□ -1.98
BRAFP1-201ENST00000445336 C7orf65Q6ZTY9 151 aa2.71□□□□□ -1.98
BRAFP1-201ENST00000445336 RPL39LQ96EH5 51 aaKnown RBP2.71□□□□□ -1.98
BRAFP1-201ENST00000445336 LAMTOR3Q9UHA4 124 aa2.71□□□□□ -1.98
BRAFP1-201ENST00000445336 SYS1-DBNDD2H3BUS1 97 aa2.7□□□□□ -1.98
BRAFP1-201ENST00000445336 LYRM1O43325 122 aa2.7□□□□□ -1.98
BRAFP1-201ENST00000445336 ERC2-IT1O76042 136 aa2.7□□□□□ -1.98
BRAFP1-201ENST00000445336 UMAD1C9J7I0 102 aa2.7□□□□□ -1.98
BRAFP1-201ENST00000445336 HBDP02042 147 aa2.7□□□□□ -1.98
BRAFP1-201ENST00000445336 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
BRAFP1-201ENST00000445336 AMN1Q8IY45 258 aa2.7□□□□□ -1.98
BRAFP1-201ENST00000445336 A0A0J9YXY3 114 aa2.7□□□□□ -1.98
BRAFP1-201ENST00000445336 PMCHL1Q16048 86 aa2.7□□□□□ -1.98
BRAFP1-201ENST00000445336 Q8N8P6 123 aa2.7□□□□□ -1.98
BRAFP1-201ENST00000445336 PPDPFLQ8WWR9 84 aa2.7□□□□□ -1.98
BRAFP1-201ENST00000445336 SRP19P09132 144 aaKnown RBP2.69□□□□□ -1.98
BRAFP1-201ENST00000445336 IGFL1Q6UW32 110 aa2.69□□□□□ -1.98
BRAFP1-201ENST00000445336 NOTCH2NLQ7Z3S9 236 aa2.69□□□□□ -1.98
BRAFP1-201ENST00000445336 CEND1Q8N111 149 aa2.69□□□□□ -1.98
BRAFP1-201ENST00000445336 A6NED7 52 aa2.69□□□□□ -1.98
BRAFP1-201ENST00000445336 NXT2Q9NPJ8 142 aaKnown RBP2.69□□□□□ -1.98
BRAFP1-201ENST00000445336 C8orf17Q9NRJ1 99 aa2.69□□□□□ -1.98
BRAFP1-201ENST00000445336 CXCL6P80162 114 aa2.68□□□□□ -1.98
BRAFP1-201ENST00000445336 PYDC2Q56P42 97 aa2.68□□□□□ -1.98
BRAFP1-201ENST00000445336 HIST1H4GQ99525 98 aa2.68□□□□□ -1.98
BRAFP1-201ENST00000445336 OSTCQ9NRP0 149 aa2.68□□□□□ -1.98
BRAFP1-201ENST00000445336 LINC00310P59036 64 aa2.68□□□□□ -1.98
BRAFP1-201ENST00000445336 SPTSSBQ8NFR3 76 aa2.68□□□□□ -1.98
BRAFP1-201ENST00000445336 C18orf32Q8TCD1 76 aa2.68□□□□□ -1.98
BRAFP1-201ENST00000445336 CCKP06307 115 aa2.67□□□□□ -1.98
BRAFP1-201ENST00000445336 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
BRAFP1-201ENST00000445336 SERF2P84101 59 aa2.67□□□□□ -1.98
BRAFP1-201ENST00000445336 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
BRAFP1-201ENST00000445336 FAM104AQ969W3 186 aa2.67□□□□□ -1.98
BRAFP1-201ENST00000445336 AMELXQ99217 191 aa2.67□□□□□ -1.98
BRAFP1-201ENST00000445336 HMSDA8MTL9 139 aa2.66□□□□□ -1.98
BRAFP1-201ENST00000445336 TSPEAR-AS2P59090 65 aa2.66□□□□□ -1.98
BRAFP1-201ENST00000445336 OBSCN-AS1Q96MR7 158 aa2.66□□□□□ -1.98
BRAFP1-201ENST00000445336 TRBV7-7A0A0K0K1E9 115 aa2.66□□□□□ -1.98
BRAFP1-201ENST00000445336 TMEM136Q6ZRR5 245 aa2.66□□□□□ -1.98
BRAFP1-201ENST00000445336 C2orf91Q6ZV80 131 aa2.66□□□□□ -1.98
BRAFP1-201ENST00000445336 RNASE13Q5GAN3 156 aaKnown RBP2.65□□□□□ -1.98
BRAFP1-201ENST00000445336 LINC01545Q5VT33 79 aa2.65□□□□□ -1.98
BRAFP1-201ENST00000445336 TOMM7Q9P0U1 55 aa2.65□□□□□ -1.98
BRAFP1-201ENST00000445336 SERF1AO75920 110 aa2.65□□□□□ -1.99
BRAFP1-201ENST00000445336 C3orf79P0CE67 100 aa2.65□□□□□ -1.99
BRAFP1-201ENST00000445336 Q6ZRX8 168 aa2.65□□□□□ -1.99
BRAFP1-201ENST00000445336 CHCHD1Q96BP2 118 aaKnown RBP2.65□□□□□ -1.99
BRAFP1-201ENST00000445336 MANBALQ9NQG1 85 aa2.65□□□□□ -1.99
BRAFP1-201ENST00000445336 TRBV24-1A0A075B6N3 115 aa2.64□□□□□ -1.99
BRAFP1-201ENST00000445336 KANTRA0A1W2PQU2 76 aa2.64□□□□□ -1.99
BRAFP1-201ENST00000445336 KRTAP23-1A1A580 65 aa2.64□□□□□ -1.99
BRAFP1-201ENST00000445336 BAGE2Q86Y30 109 aa2.64□□□□□ -1.99
BRAFP1-201ENST00000445336 CKS2P33552 79 aa2.63□□□□□ -1.99
BRAFP1-201ENST00000445336 IFI27P40305 119 aaPredicted RBP2.63□□□□□ -1.99
BRAFP1-201ENST00000445336 CCL20P78556 96 aa2.63□□□□□ -1.99
BRAFP1-201ENST00000445336 ZNF345Q14585 488 aa2.63□□□□□ -1.99
BRAFP1-201ENST00000445336 C1orf64Q8NEQ6 169 aa2.63□□□□□ -1.99
BRAFP1-201ENST00000445336 Q96NJ1 140 aa2.63□□□□□ -1.99
BRAFP1-201ENST00000445336 CRIPTQ9P021 101 aa2.63□□□□□ -1.99
BRAFP1-201ENST00000445336 ZNF815PA8K554 130 aa2.62□□□□□ -1.99
BRAFP1-201ENST00000445336 K7EMI3 77 aa2.62□□□□□ -1.99
BRAFP1-201ENST00000445336 COX7B2Q8TF08 81 aa2.62□□□□□ -1.99
BRAFP1-201ENST00000445336 TMEM141Q96I45 108 aa2.62□□□□□ -1.99
BRAFP1-201ENST00000445336 NHP2Q9NX24 153 aaKnown RBP2.62□□□□□ -1.99
BRAFP1-201ENST00000445336 MRPL51Q4U2R6 128 aaKnown RBP2.62□□□□□ -1.99
BRAFP1-201ENST00000445336 SMIM13P0DJ93 91 aa2.62□□□□□ -1.99
BRAFP1-201ENST00000445336 ZNF22P17026 224 aaPredicted RBP2.62□□□□□ -1.99
BRAFP1-201ENST00000445336 TOMM5Q8N4H5 51 aa2.62□□□□□ -1.99
BRAFP1-201ENST00000445336 OCR1Q9BZK8 76 aa2.62□□□□□ -1.99
BRAFP1-201ENST00000445336 CTXND1A0A1B0GTU2 59 aa2.61□□□□□ -1.99
BRAFP1-201ENST00000445336 ATOX1O00244 68 aa2.61□□□□□ -1.99
BRAFP1-201ENST00000445336 SERP2Q8N6R1 65 aa2.61□□□□□ -1.99
BRAFP1-201ENST00000445336 TEX49A0A1B0GTD5 131 aa2.61□□□□□ -1.99
BRAFP1-201ENST00000445336 TMEM223A0PJW6 202 aa2.61□□□□□ -1.99
BRAFP1-201ENST00000445336 ORMDL3Q8N138 153 aa2.61□□□□□ -1.99
BRAFP1-201ENST00000445336 H7BZZ5 65 aa2.6□□□□□ -1.99
BRAFP1-201ENST00000445336 ST20-AS1Q8NBB2 130 aa2.6□□□□□ -1.99
BRAFP1-201ENST00000445336 Q9BRP9 147 aa2.6□□□□□ -1.99
BRAFP1-201ENST00000445336 IGLV5-39A0A0G2JS06 123 aa2.6□□□□□ -1.99
BRAFP1-201ENST00000445336 FXYD2P54710 66 aa2.6□□□□□ -1.99
BRAFP1-201ENST00000445336 IGLV4-3A0A075B6K6 122 aa2.59□□□□□ -2
BRAFP1-201ENST00000445336 A0A1W2PNM2 257 aa2.59□□□□□ -2
BRAFP1-201ENST00000445336 BAALC-AS2P0C853 105 aa2.59□□□□□ -2
BRAFP1-201ENST00000445336 P0C880 135 aa2.59□□□□□ -2
BRAFP1-201ENST00000445336 HIST1H4AP62805 103 aaKnown RBP2.59□□□□□ -2
BRAFP1-201ENST00000445336 BAGE3Q86Y29 109 aa2.58□□□□□ -2
BRAFP1-201ENST00000445336 ROMO1P60602 79 aa2.58□□□□□ -2
BRAFP1-201ENST00000445336 C20orf197Q8N268 126 aa2.58□□□□□ -2
BRAFP1-201ENST00000445336 A0A0B4J2C4 111 aa2.57□□□□□ -2
BRAFP1-201ENST00000445336 C2orf66Q6UXQ4 117 aa2.57□□□□□ -2
BRAFP1-201ENST00000445336 SCGB3A1Q96QR1 104 aa2.57□□□□□ -2
BRAFP1-201ENST00000445336 TRAPPC1Q9Y5R8 145 aa2.57□□□□□ -2
BRAFP1-201ENST00000445336 TRBV10-2A0A0K0K1G8 114 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms