RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 NBDYA0A0U1RRE5 68 aa9.18□□□□□ -0.94
CHFR-204ENST00000443047 IGLV9-49A0A0B4J1Y8 123 aa9.17□□□□□ -0.94
CHFR-204ENST00000443047 VPS13DQ5THJ4 4388 aa9.17□□□□□ -0.94
CHFR-204ENST00000443047 C8orf17Q9NRJ1 99 aa9.16□□□□□ -0.94
CHFR-204ENST00000443047 DNAH2Q9P225 4427 aa9.14□□□□□ -0.95
CHFR-204ENST00000443047 Q6ZR54 194 aa9.14□□□□□ -0.95
CHFR-204ENST00000443047 PLA2G1BP04054 148 aaKnown RBP9.13□□□□□ -0.95
CHFR-204ENST00000443047 Q6ZRN7 208 aaPredicted RBP9.13□□□□□ -0.95
CHFR-204ENST00000443047 NUPR2A6NF83 97 aa9.12□□□□□ -0.95
CHFR-204ENST00000443047 HECTD4Q9Y4D8 3996 aa9.12□□□□□ -0.95
CHFR-204ENST00000443047 CDK2AP2O75956 126 aa9.11□□□□□ -0.95
CHFR-204ENST00000443047 A0A087X002 238 aa9.1□□□□□ -0.95
CHFR-204ENST00000443047 C14orf177Q52M58 125 aa9.1□□□□□ -0.95
CHFR-204ENST00000443047 NOTCH2NLQ7Z3S9 236 aa9.1□□□□□ -0.95
CHFR-204ENST00000443047 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.1□□□□□ -0.95
CHFR-204ENST00000443047 FRAS1Q86XX4 4008 aa9.1□□□□□ -0.95
CHFR-204ENST00000443047 A0A1B0GU69 56 aa9.09□□□□□ -0.95
CHFR-204ENST00000443047 MRPL34Q9BQ48 92 aaKnown RBP9.07□□□□□ -0.96
CHFR-204ENST00000443047 CSAG1Q6PB30 78 aa9.07□□□□□ -0.96
CHFR-204ENST00000443047 Q96NJ1 140 aa9.07□□□□□ -0.96
CHFR-204ENST00000443047 FBN3Q75N90 2809 aa9.06□□□□□ -0.96
CHFR-204ENST00000443047 ACYP2P14621 99 aa9.05□□□□□ -0.96
CHFR-204ENST00000443047 A0A1B0GVX0 72 aa9.05□□□□□ -0.96
CHFR-204ENST00000443047 ASB16-AS1Q495Z4 193 aa9.04□□□□□ -0.96
CHFR-204ENST00000443047 RETNLBQ9BQ08 111 aa9.04□□□□□ -0.96
CHFR-204ENST00000443047 SPRR1BP22528 89 aa9.04□□□□□ -0.96
CHFR-204ENST00000443047 Q5W150 140 aa9.04□□□□□ -0.96
CHFR-204ENST00000443047 SPINK6Q6UWN8 80 aa9.03□□□□□ -0.96
CHFR-204ENST00000443047 RTL8CO15255 209 aa9.02□□□□□ -0.97
CHFR-204ENST00000443047 A0A087WTM6 91 aa9.02□□□□□ -0.97
CHFR-204ENST00000443047 MIR22HGQ0VDD5 57 aa9.01□□□□□ -0.97
CHFR-204ENST00000443047 DNAH8Q96JB1 4490 aa8.99□□□□□ -0.97
CHFR-204ENST00000443047 DNAH6Q9C0G6 4158 aa8.99□□□□□ -0.97
CHFR-204ENST00000443047 DNAH17Q9UFH2 4485 aa8.98□□□□□ -0.97
CHFR-204ENST00000443047 SPACA4Q8TDM5 124 aa8.98□□□□□ -0.97
CHFR-204ENST00000443047 SPATA8Q6RVD6 105 aa8.97□□□□□ -0.97
CHFR-204ENST00000443047 ANAPC11Q9NYG5 84 aa8.97□□□□□ -0.97
CHFR-204ENST00000443047 UQCR11O14957 56 aa8.95□□□□□ -0.98
CHFR-204ENST00000443047 LY6G6CO95867 125 aa8.94□□□□□ -0.98
CHFR-204ENST00000443047 KRTAP13-1Q8IUC0 172 aa8.93□□□□□ -0.98
CHFR-204ENST00000443047 HYDINQ4G0P3 5121 aa8.92□□□□□ -0.98
CHFR-204ENST00000443047 DNAH11Q96DT5 4516 aa8.91□□□□□ -0.98
CHFR-204ENST00000443047 PSORS1C2Q9UIG4 136 aa8.91□□□□□ -0.98
CHFR-204ENST00000443047 IGLV5-52A0A0A0MRZ9 124 aa8.88□□□□□ -0.99
CHFR-204ENST00000443047 DNAH5Q8TE73 4624 aa8.88□□□□□ -0.99
CHFR-204ENST00000443047 C1orf134Q5TEV5 83 aa8.87□□□□□ -0.99
CHFR-204ENST00000443047 DMAC1Q96GE9 116 aa8.86□□□□□ -0.99
CHFR-204ENST00000443047 KRTAP10-2P60368 255 aa8.82□□□□□ -1
CHFR-204ENST00000443047 KRTAP13-3Q3SY46 172 aa8.81□□□□□ -1
CHFR-204ENST00000443047 ALMS1Q8TCU4 4167 aa8.8□□□□□ -1
CHFR-204ENST00000443047 ZNF706Q9Y5V0 76 aaPredicted RBP8.8□□□□□ -1
CHFR-204ENST00000443047 SPINK1P00995 79 aa8.79□□□□□ -1
CHFR-204ENST00000443047 ZNF861PO60384 105 aa8.78□□□□□ -1
CHFR-204ENST00000443047 WWC2-AS2Q96NR7 200 aa8.77□□□□□ -1.01
CHFR-204ENST00000443047 LRP1BQ9NZR2 4599 aa8.77□□□□□ -1.01
CHFR-204ENST00000443047 CIRBP-AS1Q8TBR5 109 aa8.76□□□□□ -1.01
CHFR-204ENST00000443047 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
CHFR-204ENST00000443047 LINC00483Q53H64 154 aa8.74□□□□□ -1.01
CHFR-204ENST00000443047 IGKV2D-30A0A075B6S6 120 aa8.73□□□□□ -1.01
CHFR-204ENST00000443047 IGKV2-30P06310 120 aa8.73□□□□□ -1.01
CHFR-204ENST00000443047 FAT2Q9NYQ8 4349 aa8.73□□□□□ -1.01
CHFR-204ENST00000443047 PKD1P98161 4303 aa8.72□□□□□ -1.01
CHFR-204ENST00000443047 IGLV7-43P04211 117 aa8.7□□□□□ -1.02
CHFR-204ENST00000443047 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
CHFR-204ENST00000443047 CRIPTQ9P021 101 aa8.67□□□□□ -1.02
CHFR-204ENST00000443047 KRTAP10-1P60331 282 aa8.67□□□□□ -1.02
CHFR-204ENST00000443047 PKHD1P08F94 4074 aa8.65□□□□□ -1.02
CHFR-204ENST00000443047 ROMO1P60602 79 aa8.65□□□□□ -1.02
CHFR-204ENST00000443047 VPS13BQ7Z7G8 4022 aa8.65□□□□□ -1.03
CHFR-204ENST00000443047 KRTAP25-1Q3LHN0 102 aa8.62□□□□□ -1.03
CHFR-204ENST00000443047 SACSQ9NZJ4 4579 aa8.58□□□□□ -1.04
CHFR-204ENST00000443047 Q8N1X5 172 aa8.58□□□□□ -1.04
CHFR-204ENST00000443047 LINC00304Q8N9R0 145 aa8.56□□□□□ -1.04
CHFR-204ENST00000443047 A8MUU9 505 aa8.53□□□□□ -1.04
CHFR-204ENST00000443047 KRTAP13-2Q52LG2 175 aa8.53□□□□□ -1.04
CHFR-204ENST00000443047 Q6ZSA8 131 aa8.52□□□□□ -1.04
CHFR-204ENST00000443047 H0YAA0 97 aa8.52□□□□□ -1.05
CHFR-204ENST00000443047 SSBP3-AS1Q7Z2R9 100 aa8.47□□□□□ -1.05
CHFR-204ENST00000443047 DYNC1H1Q14204 4646 aaKnown RBP8.46□□□□□ -1.05
CHFR-204ENST00000443047 FAT1Q14517 4588 aa8.46□□□□□ -1.06
CHFR-204ENST00000443047 P0C880 135 aa8.45□□□□□ -1.06
CHFR-204ENST00000443047 TYMSOSQ8TAI1 123 aa8.45□□□□□ -1.06
CHFR-204ENST00000443047 KRTAP1-4P0C5Y4 121 aa8.44□□□□□ -1.06
CHFR-204ENST00000443047 SMR3BP02814 79 aaPredicted RBP8.43□□□□□ -1.06
CHFR-204ENST00000443047 A0A1B0GU33 70 aa8.41□□□□□ -1.06
CHFR-204ENST00000443047 KMT2CQ8NEZ4 4911 aaKnown RBP8.39□□□□□ -1.07
CHFR-204ENST00000443047 KRTAP16-1A8MUX0 517 aa8.39□□□□□ -1.07
CHFR-204ENST00000443047 KRTAP21-3Q3LHN1 58 aa8.33□□□□□ -1.08
CHFR-204ENST00000443047 DMBT1Q9UGM3 2413 aaPredicted RBP8.33□□□□□ -1.08
CHFR-204ENST00000443047 SPINT4Q6UDR6 99 aa8.33□□□□□ -1.08
CHFR-204ENST00000443047 RYR2Q92736 4967 aa8.32□□□□□ -1.08
CHFR-204ENST00000443047 APOBP04114 4563 aaKnown RBP8.31□□□□□ -1.08
CHFR-204ENST00000443047 K7ERS5 55 aa8.31□□□□□ -1.08
CHFR-204ENST00000443047 J3QL48 77 aa8.3□□□□□ -1.08
CHFR-204ENST00000443047 H1FX-AS1Q4G0G2 97 aa8.3□□□□□ -1.08
CHFR-204ENST00000443047 NDUFAF8A1L188 74 aa8.22□□□□□ -1.09
CHFR-204ENST00000443047 A0A1B0GVY2 172 aa8.2□□□□□ -1.1
CHFR-204ENST00000443047 COX6B2Q6YFQ2 88 aa8.15□□□□□ -1.1
CHFR-204ENST00000443047 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.1
CHFR-204ENST00000443047 A0A0D9SG42 100 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms