RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 NOTCH2NLQ7Z3S9 236 aa8.59□□□□□ -1.03
USP39-205ENST00000442708 F8W1H4 67 aa8.56□□□□□ -1.04
USP39-205ENST00000442708 IGHV6-1A0A0B4J1U7 121 aa8.54□□□□□ -1.04
USP39-205ENST00000442708 KRTAP16-1A8MUX0 517 aa8.54□□□□□ -1.04
USP39-205ENST00000442708 J3KT08 172 aa8.54□□□□□ -1.04
USP39-205ENST00000442708 NREPQ16612 68 aa8.54□□□□□ -1.04
USP39-205ENST00000442708 A0A1B0GVX0 72 aa8.53□□□□□ -1.04
USP39-205ENST00000442708 LINC00313P59037 77 aa8.53□□□□□ -1.04
USP39-205ENST00000442708 ETDBQ3ZM63 59 aa8.53□□□□□ -1.04
USP39-205ENST00000442708 Q75L30 129 aa8.53□□□□□ -1.04
USP39-205ENST00000442708 C20orf166-AS1Q96NR2 134 aa8.52□□□□□ -1.05
USP39-205ENST00000442708 A8MUU9 505 aa8.51□□□□□ -1.05
USP39-205ENST00000442708 A0A1B0GV90 55 aa8.5□□□□□ -1.05
USP39-205ENST00000442708 IGKV3D-7A0A0C4DH55 119 aa8.49□□□□□ -1.05
USP39-205ENST00000442708 LCE2AQ5TA79 106 aaPredicted RBP8.49□□□□□ -1.05
USP39-205ENST00000442708 A8MWP4 228 aa8.48□□□□□ -1.05
USP39-205ENST00000442708 Q6ZVQ6 151 aa8.47□□□□□ -1.05
USP39-205ENST00000442708 LINC00846Q9NV44 126 aa8.47□□□□□ -1.05
USP39-205ENST00000442708 C8orf87E5RJ46 101 aa8.46□□□□□ -1.06
USP39-205ENST00000442708 NDUFB1O75438 58 aa8.44□□□□□ -1.06
USP39-205ENST00000442708 ATP11AUNQ6ZP68 121 aa8.43□□□□□ -1.06
USP39-205ENST00000442708 PRR15Q8IV56 129 aa8.43□□□□□ -1.06
USP39-205ENST00000442708 C8orf17Q9NRJ1 99 aa8.43□□□□□ -1.06
USP39-205ENST00000442708 FAT4Q6V0I7 4981 aa8.41□□□□□ -1.06
USP39-205ENST00000442708 K7EQZ3 153 aa8.41□□□□□ -1.06
USP39-205ENST00000442708 BPY2O14599 106 aa8.41□□□□□ -1.06
USP39-205ENST00000442708 MMP24-AS1A0A0U1RRL7 71 aa8.38□□□□□ -1.07
USP39-205ENST00000442708 KRTAP19-2Q3LHN2 52 aa8.38□□□□□ -1.07
USP39-205ENST00000442708 A0A0U1RQV1 116 aa8.37□□□□□ -1.07
USP39-205ENST00000442708 Q8N9L7 120 aa8.37□□□□□ -1.07
USP39-205ENST00000442708 UBL5Q9BZL1 73 aa8.37□□□□□ -1.07
USP39-205ENST00000442708 Q8N9P0 234 aaPredicted RBP8.35□□□□□ -1.07
USP39-205ENST00000442708 LCE2CQ5TA81 110 aa8.34□□□□□ -1.07
USP39-205ENST00000442708 hDV103S1A0JD37 113 aa8.29□□□□□ -1.08
USP39-205ENST00000442708 TMEM254Q8TBM7 123 aa8.29□□□□□ -1.08
USP39-205ENST00000442708 ZCCHC13Q8WW36 166 aaKnown RBP8.28□□□□□ -1.08
USP39-205ENST00000442708 MRPL34Q9BQ48 92 aaKnown RBP8.28□□□□□ -1.08
USP39-205ENST00000442708 WFDC13Q8IUB5 93 aa8.26□□□□□ -1.09
USP39-205ENST00000442708 FAM240AA0A1B0GVK7 77 aa8.25□□□□□ -1.09
USP39-205ENST00000442708 ACYP1P07311 99 aa8.25□□□□□ -1.09
USP39-205ENST00000442708 CXCL6P80162 114 aa8.23□□□□□ -1.09
USP39-205ENST00000442708 CASC2Q6XLA1 102 aa8.23□□□□□ -1.09
USP39-205ENST00000442708 CRCT1Q9UGL9 99 aa8.2□□□□□ -1.1
USP39-205ENST00000442708 HCG22E2RYF7 251 aa8.19□□□□□ -1.1
USP39-205ENST00000442708 NDUFS5O43920 106 aa8.18□□□□□ -1.1
USP39-205ENST00000442708 HRES1P13985 223 aa8.17□□□□□ -1.1
USP39-205ENST00000442708 MT1HP80294 61 aa8.17□□□□□ -1.1
USP39-205ENST00000442708 LCE2DQ5TA82 110 aaPredicted RBP8.17□□□□□ -1.1
USP39-205ENST00000442708 SPINK7P58062 85 aa8.15□□□□□ -1.1
USP39-205ENST00000442708 Q5W150 140 aa8.15□□□□□ -1.1
USP39-205ENST00000442708 COX6B2Q6YFQ2 88 aa8.15□□□□□ -1.1
USP39-205ENST00000442708 MPLKIPQ8TAP9 179 aa8.14□□□□□ -1.11
USP39-205ENST00000442708 ATP5EP2Q5VTU8 51 aa8.11□□□□□ -1.11
USP39-205ENST00000442708 FLGP20930 4061 aaPredicted RBP8.09□□□□□ -1.11
USP39-205ENST00000442708 LINC00643Q86TS7 51 aa8.09□□□□□ -1.11
USP39-205ENST00000442708 J3QR89 54 aa8.05□□□□□ -1.12
USP39-205ENST00000442708 HIST1H4AP62805 103 aaKnown RBP8.05□□□□□ -1.12
USP39-205ENST00000442708 FSIP2Q5CZC0 6907 aa8.03□□□□□ -1.12
USP39-205ENST00000442708 RBM12B-AS1Q9P1G2 102 aa8.03□□□□□ -1.12
USP39-205ENST00000442708 A0A087WVE0 104 aa8.02□□□□□ -1.13
USP39-205ENST00000442708 IGKV2D-30A0A075B6S6 120 aa8.01□□□□□ -1.13
USP39-205ENST00000442708 IGKV2-30P06310 120 aa8.01□□□□□ -1.13
USP39-205ENST00000442708 FAM236DA0A1B0GTK5 79 aa8□□□□□ -1.13
USP39-205ENST00000442708 FAM236CP0DP71 79 aa8□□□□□ -1.13
USP39-205ENST00000442708 M0R2T5 61 aa7.98□□□□□ -1.13
USP39-205ENST00000442708 C7orf65Q6ZTY9 151 aa7.98□□□□□ -1.13
USP39-205ENST00000442708 TP53AIP1Q9HCN2 124 aa7.98□□□□□ -1.13
USP39-205ENST00000442708 KRTAP10-6P60371 365 aaPredicted RBP7.96□□□□□ -1.14
USP39-205ENST00000442708 LORP23490 312 aaPredicted RBP7.95□□□□□ -1.14
USP39-205ENST00000442708 K7ERU9 68 aa7.91□□□□□ -1.14
USP39-205ENST00000442708 TRAV22A0A0B4J277 110 aa7.87□□□□□ -1.15
USP39-205ENST00000442708 C4orf26Q17RF5 130 aa7.87□□□□□ -1.15
USP39-205ENST00000442708 UQCRQO14949 82 aa7.86□□□□□ -1.15
USP39-205ENST00000442708 MT-ATP8P03928 68 aa7.86□□□□□ -1.15
USP39-205ENST00000442708 OCR1Q9BZK8 76 aa7.83□□□□□ -1.16
USP39-205ENST00000442708 H1FX-AS1Q4G0G2 97 aa7.82□□□□□ -1.16
USP39-205ENST00000442708 CYP4F30PQ9H0H9 118 aa7.82□□□□□ -1.16
USP39-205ENST00000442708 H0Y9P7 68 aa7.81□□□□□ -1.16
USP39-205ENST00000442708 KRTAP9-8Q9BYQ0 159 aa7.8□□□□□ -1.16
USP39-205ENST00000442708 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
USP39-205ENST00000442708 LOC101927531A0A1B0GV80 90 aa7.78□□□□□ -1.16
USP39-205ENST00000442708 IMUPQ9GZP8 106 aa7.77□□□□□ -1.17
USP39-205ENST00000442708 ATOX1O00244 68 aa7.75□□□□□ -1.17
USP39-205ENST00000442708 KRTAP9-7A8MTY7 169 aa7.74□□□□□ -1.17
USP39-205ENST00000442708 C1orf64Q8NEQ6 169 aa7.74□□□□□ -1.17
USP39-205ENST00000442708 MT2AP02795 61 aa7.72□□□□□ -1.17
USP39-205ENST00000442708 SCGB1A1P11684 91 aa7.71□□□□□ -1.18
USP39-205ENST00000442708 LINC00208Q96KT6 92 aa7.71□□□□□ -1.18
USP39-205ENST00000442708 FAM236AA0A1B0GUQ0 79 aa7.68□□□□□ -1.18
USP39-205ENST00000442708 FAM236BA0A1B0GV22 79 aa7.68□□□□□ -1.18
USP39-205ENST00000442708 KLKP1Q107X0 134 aa7.68□□□□□ -1.18
USP39-205ENST00000442708 C5orf47Q569G3 176 aa7.68□□□□□ -1.18
USP39-205ENST00000442708 MT1FP04733 61 aa7.67□□□□□ -1.18
USP39-205ENST00000442708 MP68P56378 58 aa7.67□□□□□ -1.18
USP39-205ENST00000442708 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.66□□□□□ -1.18
USP39-205ENST00000442708 H3BPC8 53 aa7.61□□□□□ -1.19
USP39-205ENST00000442708 S4R3F8 94 aa7.61□□□□□ -1.19
USP39-205ENST00000442708 LCA10Q71F78 164 aa7.6□□□□□ -1.19
USP39-205ENST00000442708 TRAV7A0A075B6U4 112 aa7.59□□□□□ -1.19
USP39-205ENST00000442708 KRTAP10-10P60014 251 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms