RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 Q96NJ1 140 aa10.51□□□□□ -0.73
SHROOM1-204ENST00000440118 A0A1B0GV72 72 aa10.5□□□□□ -0.73
SHROOM1-204ENST00000440118 Q75L30 129 aa10.5□□□□□ -0.73
SHROOM1-204ENST00000440118 RBM3P98179 157 aaKnown RBP10.49□□□□□ -0.73
SHROOM1-204ENST00000440118 M0R2T5 61 aa10.47□□□□□ -0.73
SHROOM1-204ENST00000440118 DSCR8Q96T75 97 aa10.47□□□□□ -0.73
SHROOM1-204ENST00000440118 SCGB1A1P11684 91 aa10.44□□□□□ -0.74
SHROOM1-204ENST00000440118 CCKP06307 115 aa10.43□□□□□ -0.74
SHROOM1-204ENST00000440118 LOC110117498A0A087WWA1 95 aa10.42□□□□□ -0.74
SHROOM1-204ENST00000440118 A0A1W2PNM2 257 aa10.42□□□□□ -0.74
SHROOM1-204ENST00000440118 LINC00643Q86TS7 51 aa10.4□□□□□ -0.74
SHROOM1-204ENST00000440118 C14orf132Q9NPU4 83 aa10.4□□□□□ -0.74
SHROOM1-204ENST00000440118 A0A1B0GW54 56 aa10.39□□□□□ -0.75
SHROOM1-204ENST00000440118 LCE2DQ5TA82 110 aaPredicted RBP10.39□□□□□ -0.75
SHROOM1-204ENST00000440118 TRBV7-4A0A0J9YYF1 115 aa10.38□□□□□ -0.75
SHROOM1-204ENST00000440118 DSCR10P59022 87 aa10.38□□□□□ -0.75
SHROOM1-204ENST00000440118 IGKV4-1P06312 121 aa10.36□□□□□ -0.75
SHROOM1-204ENST00000440118 C20orf166-AS1Q96NR2 134 aa10.36□□□□□ -0.75
SHROOM1-204ENST00000440118 IMUPQ9GZP8 106 aa10.36□□□□□ -0.75
SHROOM1-204ENST00000440118 UBL5Q9BZL1 73 aa10.34□□□□□ -0.75
SHROOM1-204ENST00000440118 A8MUU9 505 aa10.33□□□□□ -0.76
SHROOM1-204ENST00000440118 ATP5EP2Q5VTU8 51 aa10.32□□□□□ -0.76
SHROOM1-204ENST00000440118 Q6ZQT0 140 aa10.32□□□□□ -0.76
SHROOM1-204ENST00000440118 LINC00313P59037 77 aa10.31□□□□□ -0.76
SHROOM1-204ENST00000440118 KRTAP10-6P60371 365 aaPredicted RBP10.31□□□□□ -0.76
SHROOM1-204ENST00000440118 LORP23490 312 aaPredicted RBP10.28□□□□□ -0.76
SHROOM1-204ENST00000440118 DEFB116Q30KQ4 102 aa10.28□□□□□ -0.76
SHROOM1-204ENST00000440118 MT-ATP8P03928 68 aa10.26□□□□□ -0.77
SHROOM1-204ENST00000440118 FLGP20930 4061 aaPredicted RBP10.26□□□□□ -0.77
SHROOM1-204ENST00000440118 IGHV6-1A0A0B4J1U7 121 aa10.25□□□□□ -0.77
SHROOM1-204ENST00000440118 FSIP2Q5CZC0 6907 aa10.25□□□□□ -0.77
SHROOM1-204ENST00000440118 LINC00472Q9H8W2 130 aa10.23□□□□□ -0.77
SHROOM1-204ENST00000440118 LINC00846Q9NV44 126 aa10.23□□□□□ -0.77
SHROOM1-204ENST00000440118 CRCT1Q9UGL9 99 aa10.23□□□□□ -0.77
SHROOM1-204ENST00000440118 PCP4P48539 62 aa10.22□□□□□ -0.77
SHROOM1-204ENST00000440118 KRTAP16-1A8MUX0 517 aa10.18□□□□□ -0.78
SHROOM1-204ENST00000440118 NOTCH2NLQ7Z3S9 236 aa10.17□□□□□ -0.78
SHROOM1-204ENST00000440118 FAM236DA0A1B0GTK5 79 aa10.16□□□□□ -0.78
SHROOM1-204ENST00000440118 FAM236CP0DP71 79 aa10.16□□□□□ -0.78
SHROOM1-204ENST00000440118 A0A1B0GVX0 72 aa10.15□□□□□ -0.78
SHROOM1-204ENST00000440118 C8orf87E5RJ46 101 aa10.15□□□□□ -0.78
SHROOM1-204ENST00000440118 CXCL6P80162 114 aa10.15□□□□□ -0.78
SHROOM1-204ENST00000440118 NREPQ16612 68 aa10.15□□□□□ -0.78
SHROOM1-204ENST00000440118 J3KT08 172 aa10.12□□□□□ -0.79
SHROOM1-204ENST00000440118 Q6ZVQ6 151 aa10.11□□□□□ -0.79
SHROOM1-204ENST00000440118 RBM12B-AS1Q9P1G2 102 aa10.09□□□□□ -0.79
SHROOM1-204ENST00000440118 NDUFB1O75438 58 aa10.08□□□□□ -0.8
SHROOM1-204ENST00000440118 IGKV3D-7A0A0C4DH55 119 aa10.06□□□□□ -0.8
SHROOM1-204ENST00000440118 HIST1H4AP62805 103 aaKnown RBP10.05□□□□□ -0.8
SHROOM1-204ENST00000440118 ANAPC13Q9BS18 74 aa10.05□□□□□ -0.8
SHROOM1-204ENST00000440118 ATOX1O00244 68 aa10.03□□□□□ -0.8
SHROOM1-204ENST00000440118 BPY2O14599 106 aa10.03□□□□□ -0.8
SHROOM1-204ENST00000440118 SMIM20Q8N5G0 67 aa10.01□□□□□ -0.81
SHROOM1-204ENST00000440118 FAM236AA0A1B0GUQ0 79 aa10□□□□□ -0.81
SHROOM1-204ENST00000440118 FAM236BA0A1B0GV22 79 aa10□□□□□ -0.81
SHROOM1-204ENST00000440118 ZCCHC13Q8WW36 166 aaKnown RBP9.99□□□□□ -0.81
SHROOM1-204ENST00000440118 A8MWP4 228 aa9.98□□□□□ -0.81
SHROOM1-204ENST00000440118 HRES1P13985 223 aa9.98□□□□□ -0.81
SHROOM1-204ENST00000440118 C8orf17Q9NRJ1 99 aa9.94□□□□□ -0.82
SHROOM1-204ENST00000440118 MPLKIPQ8TAP9 179 aa9.92□□□□□ -0.82
SHROOM1-204ENST00000440118 SPINK7P58062 85 aa9.9□□□□□ -0.82
SHROOM1-204ENST00000440118 Q8N9P0 234 aaPredicted RBP9.9□□□□□ -0.82
SHROOM1-204ENST00000440118 KRTAP9-8Q9BYQ0 159 aa9.88□□□□□ -0.83
SHROOM1-204ENST00000440118 UQCRQO14949 82 aa9.85□□□□□ -0.83
SHROOM1-204ENST00000440118 PRR15Q8IV56 129 aa9.85□□□□□ -0.83
SHROOM1-204ENST00000440118 SERP2Q8N6R1 65 aa9.85□□□□□ -0.83
SHROOM1-204ENST00000440118 A0A087WVE0 104 aa9.84□□□□□ -0.83
SHROOM1-204ENST00000440118 COX7CP15954 63 aa9.83□□□□□ -0.84
SHROOM1-204ENST00000440118 WFDC13Q8IUB5 93 aa9.82□□□□□ -0.84
SHROOM1-204ENST00000440118 TRAV7A0A075B6U4 112 aa9.8□□□□□ -0.84
SHROOM1-204ENST00000440118 NDUFS5O43920 106 aa9.79□□□□□ -0.84
SHROOM1-204ENST00000440118 MT2AP02795 61 aa9.79□□□□□ -0.84
SHROOM1-204ENST00000440118 TMEM254Q8TBM7 123 aa9.79□□□□□ -0.84
SHROOM1-204ENST00000440118 MRPL34Q9BQ48 92 aaKnown RBP9.79□□□□□ -0.84
SHROOM1-204ENST00000440118 MMP24-AS1A0A0U1RRL7 71 aa9.78□□□□□ -0.84
SHROOM1-204ENST00000440118 hDV103S1A0JD37 113 aa9.76□□□□□ -0.85
SHROOM1-204ENST00000440118 K7EQZ3 153 aa9.76□□□□□ -0.85
SHROOM1-204ENST00000440118 KRTAP10-10P60014 251 aa9.74□□□□□ -0.85
SHROOM1-204ENST00000440118 HCG22E2RYF7 251 aa9.72□□□□□ -0.85
SHROOM1-204ENST00000440118 MT1FP04733 61 aa9.71□□□□□ -0.86
SHROOM1-204ENST00000440118 USH2AO75445 5202 aa9.71□□□□□ -0.86
SHROOM1-204ENST00000440118 Q8N9L7 120 aa9.69□□□□□ -0.86
SHROOM1-204ENST00000440118 SSPOA2VEC9 5147 aa9.66□□□□□ -0.86
SHROOM1-204ENST00000440118 CCDC179H3BU77 68 aa9.66□□□□□ -0.86
SHROOM1-204ENST00000440118 NDUFC1O43677 76 aa9.64□□□□□ -0.87
SHROOM1-204ENST00000440118 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
SHROOM1-204ENST00000440118 IGKV2D-30A0A075B6S6 120 aa9.63□□□□□ -0.87
SHROOM1-204ENST00000440118 IGKV2-30P06310 120 aa9.63□□□□□ -0.87
SHROOM1-204ENST00000440118 C5orf47Q569G3 176 aa9.62□□□□□ -0.87
SHROOM1-204ENST00000440118 C7orf65Q6ZTY9 151 aa9.6□□□□□ -0.87
SHROOM1-204ENST00000440118 OCR1Q9BZK8 76 aa9.6□□□□□ -0.87
SHROOM1-204ENST00000440118 TP53AIP1Q9HCN2 124 aa9.6□□□□□ -0.87
SHROOM1-204ENST00000440118 KRTAP9-3Q9BYQ3 159 aa9.57□□□□□ -0.88
SHROOM1-204ENST00000440118 H3BPC8 53 aa9.56□□□□□ -0.88
SHROOM1-204ENST00000440118 MP68P56378 58 aa9.56□□□□□ -0.88
SHROOM1-204ENST00000440118 KLKP1Q107X0 134 aa9.56□□□□□ -0.88
SHROOM1-204ENST00000440118 H1FX-AS1Q4G0G2 97 aa9.56□□□□□ -0.88
SHROOM1-204ENST00000440118 C20orf197Q8N268 126 aa9.56□□□□□ -0.88
SHROOM1-204ENST00000440118 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.55□□□□□ -0.88
SHROOM1-204ENST00000440118 LCE2BO14633 110 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms