RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	OBSCN-AS1	Q96MR7	158 aa		8.43	□□□□□ -1.06
LAMB1-205	ENST00000439976	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	8.43	□□□□□ -1.06
LAMB1-205	ENST00000439976		Q6JHZ5	121 aa		8.42	□□□□□ -1.06
LAMB1-205	ENST00000439976		Q6Q795	121 aa		8.39	□□□□□ -1.07
LAMB1-205	ENST00000439976		A0A1B0GV72	72 aa		8.38	□□□□□ -1.07
LAMB1-205	ENST00000439976	LOC110117498	A0A087WWA1	95 aa		8.37	□□□□□ -1.07
LAMB1-205	ENST00000439976	TRBV7-4	A0A0J9YYF1	115 aa		8.37	□□□□□ -1.07
LAMB1-205	ENST00000439976	C14orf132	Q9NPU4	83 aa		8.37	□□□□□ -1.07
LAMB1-205	ENST00000439976	IGFL1	Q6UW32	110 aa		8.34	□□□□□ -1.07
LAMB1-205	ENST00000439976		Q75L30	129 aa		8.34	□□□□□ -1.07
LAMB1-205	ENST00000439976		J3QR89	54 aa		8.33	□□□□□ -1.08
LAMB1-205	ENST00000439976	CCK	P06307	115 aa		8.33	□□□□□ -1.08
LAMB1-205	ENST00000439976		Q6ZQT0	140 aa		8.33	□□□□□ -1.08
LAMB1-205	ENST00000439976		A0A1B0GW54	56 aa		8.31	□□□□□ -1.08
LAMB1-205	ENST00000439976	ATP11AUN	Q6ZP68	121 aa		8.31	□□□□□ -1.08
LAMB1-205	ENST00000439976	VPS25	Q9BRG1	176 aa		8.3	□□□□□ -1.08
LAMB1-205	ENST00000439976		A0A1W2PNM2	257 aa		8.27	□□□□□ -1.09
LAMB1-205	ENST00000439976	ACYP1	P07311	99 aa		8.27	□□□□□ -1.09
LAMB1-205	ENST00000439976	TRBV7-7	A0A0K0K1E9	115 aa		8.26	□□□□□ -1.09
LAMB1-205	ENST00000439976		K7ERU9	68 aa		8.26	□□□□□ -1.09
LAMB1-205	ENST00000439976	MT2A	P02795	61 aa		8.26	□□□□□ -1.09
LAMB1-205	ENST00000439976	KRTAP19-1	Q8IUB9	90 aa		8.26	□□□□□ -1.09
LAMB1-205	ENST00000439976	MACF1	Q9UPN3	7388 aa	Known RBP	8.25	□□□□□ -1.09
LAMB1-205	ENST00000439976	FAM240A	A0A1B0GVK7	77 aa		8.25	□□□□□ -1.09
LAMB1-205	ENST00000439976	LCE2B	O14633	110 aa		8.25	□□□□□ -1.09
LAMB1-205	ENST00000439976	SYNE2	Q8WXH0	6885 aa	Known RBP	8.25	□□□□□ -1.09
LAMB1-205	ENST00000439976	SS18L2	Q9UHA2	77 aa		8.22	□□□□□ -1.09
LAMB1-205	ENST00000439976		A0A087WSZ3	146 aa		8.2	□□□□□ -1.1
LAMB1-205	ENST00000439976	MT1F	P04733	61 aa		8.2	□□□□□ -1.1
LAMB1-205	ENST00000439976	C20orf166-AS1	Q96NR2	134 aa		8.2	□□□□□ -1.1
LAMB1-205	ENST00000439976		Q96NJ1	140 aa		8.19	□□□□□ -1.1
LAMB1-205	ENST00000439976	KRTAP9-3	Q9BYQ3	159 aa		8.19	□□□□□ -1.1
LAMB1-205	ENST00000439976	UBL5	Q9BZL1	73 aa		8.19	□□□□□ -1.1
LAMB1-205	ENST00000439976	NREP	Q16612	68 aa		8.18	□□□□□ -1.1
LAMB1-205	ENST00000439976		A8MUU9	505 aa		8.17	□□□□□ -1.1
LAMB1-205	ENST00000439976	LINC00846	Q9NV44	126 aa		8.16	□□□□□ -1.1
LAMB1-205	ENST00000439976		Q6ZVQ6	151 aa		8.12	□□□□□ -1.11
LAMB1-205	ENST00000439976	KRTAP16-1	A8MUX0	517 aa		8.11	□□□□□ -1.11
LAMB1-205	ENST00000439976		J3KT08	172 aa		8.09	□□□□□ -1.11
LAMB1-205	ENST00000439976	LINC00643	Q86TS7	51 aa		8.08	□□□□□ -1.12
LAMB1-205	ENST00000439976	KRTAP10-10	P60014	251 aa		8.07	□□□□□ -1.12
LAMB1-205	ENST00000439976	MPLKIP	Q8TAP9	179 aa		8.07	□□□□□ -1.12
LAMB1-205	ENST00000439976	LINC00472	Q9H8W2	130 aa		8.07	□□□□□ -1.12
LAMB1-205	ENST00000439976	BPY2	O14599	106 aa		8.06	□□□□□ -1.12
LAMB1-205	ENST00000439976	ATP5EP2	Q5VTU8	51 aa		8.06	□□□□□ -1.12
LAMB1-205	ENST00000439976	SIGMAR1	Q99720	223 aa		8.06	□□□□□ -1.12
LAMB1-205	ENST00000439976	CXCL6	P80162	114 aa		8.04	□□□□□ -1.12
LAMB1-205	ENST00000439976	IGKV4-1	P06312	121 aa		8.03	□□□□□ -1.12
LAMB1-205	ENST00000439976	HRES1	P13985	223 aa		8.02	□□□□□ -1.13
LAMB1-205	ENST00000439976	DSCR10	P59022	87 aa		8.02	□□□□□ -1.13
LAMB1-205	ENST00000439976	KRTAP19-6	Q3LI70	58 aa		8.02	□□□□□ -1.13
LAMB1-205	ENST00000439976	FAM236D	A0A1B0GTK5	79 aa		8.01	□□□□□ -1.13
LAMB1-205	ENST00000439976	NDUFB1	O75438	58 aa		8.01	□□□□□ -1.13
LAMB1-205	ENST00000439976	FAM236C	P0DP71	79 aa		8.01	□□□□□ -1.13
LAMB1-205	ENST00000439976	DEFB116	Q30KQ4	102 aa		8.01	□□□□□ -1.13
LAMB1-205	ENST00000439976	IGKV3D-7	A0A0C4DH55	119 aa		7.97	□□□□□ -1.13
LAMB1-205	ENST00000439976		A8MWP4	228 aa		7.97	□□□□□ -1.13
LAMB1-205	ENST00000439976	NOTCH2NL	Q7Z3S9	236 aa		7.95	□□□□□ -1.14
LAMB1-205	ENST00000439976	RBM12B-AS1	Q9P1G2	102 aa		7.95	□□□□□ -1.14
LAMB1-205	ENST00000439976	PRR15	Q8IV56	129 aa		7.94	□□□□□ -1.14
LAMB1-205	ENST00000439976	IMUP	Q9GZP8	106 aa		7.93	□□□□□ -1.14
LAMB1-205	ENST00000439976		A0A1B0GVX0	72 aa		7.92	□□□□□ -1.14
LAMB1-205	ENST00000439976	HIST1H4A	P62805	103 aa	Known RBP	7.92	□□□□□ -1.14
LAMB1-205	ENST00000439976		K7EQZ3	153 aa		7.91	□□□□□ -1.14
LAMB1-205	ENST00000439976	IGHV6-1	A0A0B4J1U7	121 aa		7.9	□□□□□ -1.14
LAMB1-205	ENST00000439976	C8orf87	E5RJ46	101 aa		7.9	□□□□□ -1.14
LAMB1-205	ENST00000439976	MT-ATP8	P03928	68 aa		7.9	□□□□□ -1.14
LAMB1-205	ENST00000439976	LINC00313	P59037	77 aa		7.9	□□□□□ -1.14
LAMB1-205	ENST00000439976		Q8N9L7	120 aa		7.89	□□□□□ -1.15
LAMB1-205	ENST00000439976	KRTAP6-3	Q3LI67	103 aa		7.88	□□□□□ -1.15
LAMB1-205	ENST00000439976	C8orf17	Q9NRJ1	99 aa		7.85	□□□□□ -1.15
LAMB1-205	ENST00000439976	HCG22	E2RYF7	251 aa		7.83	□□□□□ -1.16
LAMB1-205	ENST00000439976	MMP24-AS1	A0A0U1RRL7	71 aa		7.81	□□□□□ -1.16
LAMB1-205	ENST00000439976	hDV103S1	A0JD37	113 aa		7.81	□□□□□ -1.16
LAMB1-205	ENST00000439976	CASC2	Q6XLA1	102 aa		7.81	□□□□□ -1.16
LAMB1-205	ENST00000439976	NEB	P20929	6669 aa		7.8	□□□□□ -1.16
LAMB1-205	ENST00000439976		A0A087WVE0	104 aa		7.8	□□□□□ -1.16
LAMB1-205	ENST00000439976	TMEM254	Q8TBM7	123 aa		7.79	□□□□□ -1.16
LAMB1-205	ENST00000439976	WFDC13	Q8IUB5	93 aa		7.78	□□□□□ -1.16
LAMB1-205	ENST00000439976	MRPL34	Q9BQ48	92 aa	Known RBP	7.76	□□□□□ -1.17
LAMB1-205	ENST00000439976	SCGB1A1	P11684	91 aa		7.75	□□□□□ -1.17
LAMB1-205	ENST00000439976		Q8N9P0	234 aa	Predicted RBP	7.74	□□□□□ -1.17
LAMB1-205	ENST00000439976	FAM236A	A0A1B0GUQ0	79 aa		7.73	□□□□□ -1.17
LAMB1-205	ENST00000439976	FAM236B	A0A1B0GV22	79 aa		7.73	□□□□□ -1.17
LAMB1-205	ENST00000439976	SPINK7	P58062	85 aa		7.73	□□□□□ -1.17
LAMB1-205	ENST00000439976	ZCCHC13	Q8WW36	166 aa	Known RBP	7.71	□□□□□ -1.18
LAMB1-205	ENST00000439976	NDUFS5	O43920	106 aa		7.7	□□□□□ -1.18
LAMB1-205	ENST00000439976	TP53AIP1	Q9HCN2	124 aa		7.69	□□□□□ -1.18
LAMB1-205	ENST00000439976	MUC12	Q9UKN1	5478 aa		7.68	□□□□□ -1.18
LAMB1-205	ENST00000439976	ATOX1	O00244	68 aa		7.68	□□□□□ -1.18
LAMB1-205	ENST00000439976	SMIM20	Q8N5G0	67 aa		7.68	□□□□□ -1.18
LAMB1-205	ENST00000439976	UQCRQ	O14949	82 aa		7.63	□□□□□ -1.19
LAMB1-205	ENST00000439976	OCR1	Q9BZK8	76 aa		7.61	□□□□□ -1.19
LAMB1-205	ENST00000439976	TRAV7	A0A075B6U4	112 aa		7.6	□□□□□ -1.19
LAMB1-205	ENST00000439976	C5orf47	Q569G3	176 aa		7.57	□□□□□ -1.2
LAMB1-205	ENST00000439976	SERP2	Q8N6R1	65 aa		7.56	□□□□□ -1.2
LAMB1-205	ENST00000439976	TRAV22	A0A0B4J277	110 aa		7.55	□□□□□ -1.2
LAMB1-205	ENST00000439976	MP68	P56378	58 aa		7.54	□□□□□ -1.2
LAMB1-205	ENST00000439976	ANAPC13	Q9BS18	74 aa		7.53	□□□□□ -1.2
LAMB1-205	ENST00000439976		Q5W150	140 aa		7.52	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms