RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 SIGMAR1Q99720 223 aa3.49□□□□□ -1.85
ERCC8-203ENST00000439176 HIGD1BQ9P298 99 aa3.49□□□□□ -1.85
ERCC8-203ENST00000439176 FAM236DA0A1B0GTK5 79 aa3.48□□□□□ -1.85
ERCC8-203ENST00000439176 H3BQ85 93 aa3.48□□□□□ -1.85
ERCC8-203ENST00000439176 DNAL4O96015 105 aa3.48□□□□□ -1.85
ERCC8-203ENST00000439176 FAM236CP0DP71 79 aa3.48□□□□□ -1.85
ERCC8-203ENST00000439176 LINC00313P59037 77 aa3.48□□□□□ -1.85
ERCC8-203ENST00000439176 C14orf144Q96I85 54 aa3.48□□□□□ -1.85
ERCC8-203ENST00000439176 PRO1854Q9UHT4 67 aa3.48□□□□□ -1.85
ERCC8-203ENST00000439176 DSCR10P59022 87 aa3.47□□□□□ -1.85
ERCC8-203ENST00000439176 SPATA45Q537H7 98 aa3.47□□□□□ -1.85
ERCC8-203ENST00000439176 ANKRD29Q8N6D5 301 aa3.47□□□□□ -1.85
ERCC8-203ENST00000439176 FAM218AQ96MZ4 157 aa3.47□□□□□ -1.85
ERCC8-203ENST00000439176 RBM12B-AS1Q9P1G2 102 aa3.47□□□□□ -1.85
ERCC8-203ENST00000439176 TRBV7-4A0A0J9YYF1 115 aa3.46□□□□□ -1.86
ERCC8-203ENST00000439176 IGKV4-1P06312 121 aa3.46□□□□□ -1.86
ERCC8-203ENST00000439176 COX6CP09669 75 aa3.46□□□□□ -1.86
ERCC8-203ENST00000439176 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
ERCC8-203ENST00000439176 CEND1Q8N111 149 aa3.46□□□□□ -1.86
ERCC8-203ENST00000439176 VAMP8Q9BV40 100 aa3.46□□□□□ -1.86
ERCC8-203ENST00000439176 ORMDL1Q9P0S3 153 aa3.46□□□□□ -1.86
ERCC8-203ENST00000439176 IGKV2D-30A0A075B6S6 120 aa3.45□□□□□ -1.86
ERCC8-203ENST00000439176 TMEM256-PLSCR3K7ERE1 68 aa3.45□□□□□ -1.86
ERCC8-203ENST00000439176 A0A1W2PNM2 257 aa3.44□□□□□ -1.86
ERCC8-203ENST00000439176 TRACP01848 142 aa3.44□□□□□ -1.86
ERCC8-203ENST00000439176 PSMB2P49721 201 aa3.44□□□□□ -1.86
ERCC8-203ENST00000439176 MTURNQ8N3F0 131 aa3.44□□□□□ -1.86
ERCC8-203ENST00000439176 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
ERCC8-203ENST00000439176 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
ERCC8-203ENST00000439176 CCKP06307 115 aa3.43□□□□□ -1.86
ERCC8-203ENST00000439176 IGHV6-1A0A0B4J1U7 121 aa3.42□□□□□ -1.86
ERCC8-203ENST00000439176 A0A1B0GV72 72 aa3.42□□□□□ -1.86
ERCC8-203ENST00000439176 C2orf91Q6ZV80 131 aa3.42□□□□□ -1.86
ERCC8-203ENST00000439176 C8orf87E5RJ46 101 aa3.41□□□□□ -1.86
ERCC8-203ENST00000439176 FXYD2P54710 66 aa3.41□□□□□ -1.86
ERCC8-203ENST00000439176 DEFB116Q30KQ4 102 aa3.41□□□□□ -1.86
ERCC8-203ENST00000439176 KRTAP16-1A8MUX0 517 aa3.4□□□□□ -1.87
ERCC8-203ENST00000439176 HSD52Q0P140 79 aa3.4□□□□□ -1.87
ERCC8-203ENST00000439176 DSCR8Q96T75 97 aa3.4□□□□□ -1.87
ERCC8-203ENST00000439176 VPS25Q9BRG1 176 aa3.4□□□□□ -1.87
ERCC8-203ENST00000439176 LINC00472Q9H8W2 130 aa3.4□□□□□ -1.87
ERCC8-203ENST00000439176 J3KT08 172 aa3.39□□□□□ -1.87
ERCC8-203ENST00000439176 SCGB1C2P0DMR2 95 aa3.39□□□□□ -1.87
ERCC8-203ENST00000439176 RBM3P98179 157 aaKnown RBP3.39□□□□□ -1.87
ERCC8-203ENST00000439176 A0A1B0GVX0 72 aa3.38□□□□□ -1.87
ERCC8-203ENST00000439176 NDUFB1O75438 58 aa3.38□□□□□ -1.87
ERCC8-203ENST00000439176 HRES1P13985 223 aa3.38□□□□□ -1.87
ERCC8-203ENST00000439176 KRTAP10-10P60014 251 aa3.38□□□□□ -1.87
ERCC8-203ENST00000439176 NOTCH2NLQ7Z3S9 236 aa3.38□□□□□ -1.87
ERCC8-203ENST00000439176 USH2AO75445 5202 aa3.37□□□□□ -1.87
ERCC8-203ENST00000439176 K7ERJ3 54 aa3.37□□□□□ -1.87
ERCC8-203ENST00000439176 MT2AP02795 61 aa3.37□□□□□ -1.87
ERCC8-203ENST00000439176 LYRM7Q5U5X0 104 aa3.37□□□□□ -1.87
ERCC8-203ENST00000439176 LINC00846Q9NV44 126 aa3.37□□□□□ -1.87
ERCC8-203ENST00000439176 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
ERCC8-203ENST00000439176 C9JAW5 83 aa3.36□□□□□ -1.87
ERCC8-203ENST00000439176 ZCCHC13Q8WW36 166 aaKnown RBP3.36□□□□□ -1.87
ERCC8-203ENST00000439176 SPINK7P58062 85 aa3.35□□□□□ -1.87
ERCC8-203ENST00000439176 UQCR10Q9UDW1 63 aa3.35□□□□□ -1.87
ERCC8-203ENST00000439176 MT1FP04733 61 aa3.34□□□□□ -1.87
ERCC8-203ENST00000439176 BAALC-AS2P0C853 105 aa3.34□□□□□ -1.87
ERCC8-203ENST00000439176 A0A1B0GW54 56 aa3.33□□□□□ -1.88
ERCC8-203ENST00000439176 JMJD7-PLA2G4BH0Y9G9 81 aa3.33□□□□□ -1.88
ERCC8-203ENST00000439176 Q6ZQT0 140 aa3.33□□□□□ -1.88
ERCC8-203ENST00000439176 A8MWP4 228 aa3.32□□□□□ -1.88
ERCC8-203ENST00000439176 PDE6GP18545 87 aa3.32□□□□□ -1.88
ERCC8-203ENST00000439176 PYY3Q5JQD4 70 aa3.32□□□□□ -1.88
ERCC8-203ENST00000439176 WFDC13Q8IUB5 93 aa3.31□□□□□ -1.88
ERCC8-203ENST00000439176 ATXN8Q156A1 80 aa3.3□□□□□ -1.88
ERCC8-203ENST00000439176 C8orf17Q9NRJ1 99 aa3.3□□□□□ -1.88
ERCC8-203ENST00000439176 Q6ZVQ6 151 aa3.29□□□□□ -1.88
ERCC8-203ENST00000439176 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
ERCC8-203ENST00000439176 LOC110117498A0A087WWA1 95 aa3.28□□□□□ -1.88
ERCC8-203ENST00000439176 IGKV3D-7A0A0C4DH55 119 aa3.28□□□□□ -1.88
ERCC8-203ENST00000439176 M0R143 59 aa3.28□□□□□ -1.88
ERCC8-203ENST00000439176 NREPQ16612 68 aa3.28□□□□□ -1.88
ERCC8-203ENST00000439176 MT3P25713 68 aa3.27□□□□□ -1.89
ERCC8-203ENST00000439176 PRR15Q8IV56 129 aa3.27□□□□□ -1.89
ERCC8-203ENST00000439176 NDUFS5O43920 106 aa3.26□□□□□ -1.89
ERCC8-203ENST00000439176 TMEM254Q8TBM7 123 aa3.26□□□□□ -1.89
ERCC8-203ENST00000439176 MRPL34Q9BQ48 92 aaKnown RBP3.26□□□□□ -1.89
ERCC8-203ENST00000439176 H1FX-AS1Q4G0G2 97 aa3.25□□□□□ -1.89
ERCC8-203ENST00000439176 C14orf132Q9NPU4 83 aa3.25□□□□□ -1.89
ERCC8-203ENST00000439176 hDV103S1A0JD37 113 aa3.24□□□□□ -1.89
ERCC8-203ENST00000439176 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
ERCC8-203ENST00000439176 MACF1Q9UPN3 7388 aaKnown RBP3.23□□□□□ -1.89
ERCC8-203ENST00000439176 PRAC1Q96KF2 57 aa3.23□□□□□ -1.89
ERCC8-203ENST00000439176 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
ERCC8-203ENST00000439176 MMP24-AS1A0A0U1RRL7 71 aa3.22□□□□□ -1.89
ERCC8-203ENST00000439176 NAA38Q9BRA0 125 aaKnown RBP3.22□□□□□ -1.89
ERCC8-203ENST00000439176 BPY2O14599 106 aa3.21□□□□□ -1.9
ERCC8-203ENST00000439176 C7orf65Q6ZTY9 151 aa3.21□□□□□ -1.9
ERCC8-203ENST00000439176 K7EQZ3 153 aa3.2□□□□□ -1.9
ERCC8-203ENST00000439176 TSTD3H0UI37 97 aa3.19□□□□□ -1.9
ERCC8-203ENST00000439176 H3BT86 120 aa3.18□□□□□ -1.9
ERCC8-203ENST00000439176 CXCL6P80162 114 aa3.17□□□□□ -1.9
ERCC8-203ENST00000439176 BATFQ16520 125 aa3.17□□□□□ -1.9
ERCC8-203ENST00000439176 CASC2Q6XLA1 102 aa3.17□□□□□ -1.9
ERCC8-203ENST00000439176 FAM236AA0A1B0GUQ0 79 aa3.16□□□□□ -1.9
ERCC8-203ENST00000439176 FAM236BA0A1B0GV22 79 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms