RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 NIPBLQ6KC79 2804 aaeCLIP1.96□□□□□ -2.1
PTPN12-206ENST00000435495 BRD3OSQ6XYD6 125 aa1.96□□□□□ -2.1
PTPN12-206ENST00000435495 PCOTHQ58A44 107 aa1.95□□□□□ -2.1
PTPN12-206ENST00000435495 PCNX1Q96RV3 2341 aa1.95□□□□□ -2.1
PTPN12-206ENST00000435495 PLCE1Q9P212 2302 aa1.94□□□□□ -2.1
PTPN12-206ENST00000435495 STATHP02808 62 aa1.94□□□□□ -2.1
PTPN12-206ENST00000435495 ANKHD1Q8IWZ3 2542 aaKnown RBP1.94□□□□□ -2.1
PTPN12-206ENST00000435495 ZNF469Q96JG9 3925 aaPredicted RBP1.94□□□□□ -2.1
PTPN12-206ENST00000435495 MAP1AP78559 2803 aaPredicted RBP1.93□□□□□ -2.1
PTPN12-206ENST00000435495 SPG11Q96JI7 2443 aa1.93□□□□□ -2.1
PTPN12-206ENST00000435495 I3L2K1 104 aa1.93□□□□□ -2.1
PTPN12-206ENST00000435495 MRPL34Q9BQ48 92 aaKnown RBP1.93□□□□□ -2.1
PTPN12-206ENST00000435495 VPS13CQ709C8 3753 aa1.93□□□□□ -2.1
PTPN12-206ENST00000435495 K7EQZ3 153 aa1.92□□□□□ -2.1
PTPN12-206ENST00000435495 SPRR5A0A1B0GTR4 108 aa1.92□□□□□ -2.1
PTPN12-206ENST00000435495 LYNX1P0DP58 116 aa1.92□□□□□ -2.1
PTPN12-206ENST00000435495 C10orf95Q9H7T3 257 aa1.92□□□□□ -2.1
PTPN12-206ENST00000435495 PCLOQ9Y6V0 5065 aa1.92□□□□□ -2.1
PTPN12-206ENST00000435495 ACANP16112 2415 aa1.91□□□□□ -2.1
PTPN12-206ENST00000435495 SMR3AQ99954 134 aa1.91□□□□□ -2.1
PTPN12-206ENST00000435495 TP53AIP1Q9HCN2 124 aa1.91□□□□□ -2.1
PTPN12-206ENST00000435495 FLNAP21333 2647 aaKnown RBP1.91□□□□□ -2.1
PTPN12-206ENST00000435495 KIAA1109Q2LD37 5005 aa1.91□□□□□ -2.1
PTPN12-206ENST00000435495 KRTAP12-1P59990 96 aa1.91□□□□□ -2.1
PTPN12-206ENST00000435495 LELP1Q5T871 98 aa1.91□□□□□ -2.1
PTPN12-206ENST00000435495 SMIM2Q9BVW6 85 aa1.91□□□□□ -2.1
PTPN12-206ENST00000435495 NSD1Q96L73 2696 aaPredicted RBP1.9□□□□□ -2.1
PTPN12-206ENST00000435495 HRNRQ86YZ3 2850 aaPredicted RBP1.9□□□□□ -2.1
PTPN12-206ENST00000435495 AKAP6Q13023 2319 aa1.9□□□□□ -2.1
PTPN12-206ENST00000435495 ANK3Q12955 4377 aaKnown RBP1.9□□□□□ -2.11
PTPN12-206ENST00000435495 FBN1P35555 2871 aaKnown RBP1.89□□□□□ -2.11
PTPN12-206ENST00000435495 H0YAA0 97 aa1.89□□□□□ -2.11
PTPN12-206ENST00000435495 HIVEP2P31629 2446 aa1.89□□□□□ -2.11
PTPN12-206ENST00000435495 DEFB108AA8MXU0 73 aa1.89□□□□□ -2.11
PTPN12-206ENST00000435495 KRTAP13-3Q3SY46 172 aa1.89□□□□□ -2.11
PTPN12-206ENST00000435495 CSPG4Q6UVK1 2322 aa1.89□□□□□ -2.11
PTPN12-206ENST00000435495 COL6A5A8TX70 2615 aa1.89□□□□□ -2.11
PTPN12-206ENST00000435495 IAPPP10997 89 aa1.88□□□□□ -2.11
PTPN12-206ENST00000435495 KRTAP10-7P60409 375 aaPredicted RBP1.88□□□□□ -2.11
PTPN12-206ENST00000435495 STAB1Q9NY15 2570 aa1.88□□□□□ -2.11
PTPN12-206ENST00000435495 ATRQ13535 2644 aa1.88□□□□□ -2.11
PTPN12-206ENST00000435495 LYNX1G3V0Z9 82 aa1.88□□□□□ -2.11
PTPN12-206ENST00000435495 NDUFA1O15239 70 aa1.88□□□□□ -2.11
PTPN12-206ENST00000435495 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
PTPN12-206ENST00000435495 ZANQ9Y493 2812 aa1.88□□□□□ -2.11
PTPN12-206ENST00000435495 MXRA5Q9NR99 2828 aa1.88□□□□□ -2.11
PTPN12-206ENST00000435495 COX6A2Q02221 97 aa1.87□□□□□ -2.11
PTPN12-206ENST00000435495 ANK2Q01484 3957 aa1.87□□□□□ -2.11
PTPN12-206ENST00000435495 TLN2Q9Y4G6 2542 aa1.87□□□□□ -2.11
PTPN12-206ENST00000435495 MINOS1Q5TGZ0 78 aa1.87□□□□□ -2.11
PTPN12-206ENST00000435495 K7EIL1 84 aa1.86□□□□□ -2.11
PTPN12-206ENST00000435495 CNFNQ9BYD5 112 aa1.86□□□□□ -2.11
PTPN12-206ENST00000435495 NBEAL1Q6ZS30 2694 aa1.86□□□□□ -2.11
PTPN12-206ENST00000435495 USMG5Q96IX5 58 aa1.86□□□□□ -2.11
PTPN12-206ENST00000435495 CUBNO60494 3623 aa1.86□□□□□ -2.11
PTPN12-206ENST00000435495 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
PTPN12-206ENST00000435495 PIGYQ3MUY2 71 aa1.85□□□□□ -2.11
PTPN12-206ENST00000435495 WNK2Q9Y3S1 2297 aa1.85□□□□□ -2.11
PTPN12-206ENST00000435495 SONP18583 2426 aaKnown RBP1.85□□□□□ -2.11
PTPN12-206ENST00000435495 USF3Q68DE3 2245 aa1.85□□□□□ -2.11
PTPN12-206ENST00000435495 COX6B2Q6YFQ2 88 aa1.85□□□□□ -2.11
PTPN12-206ENST00000435495 KRTAP10-10P60014 251 aa1.84□□□□□ -2.11
PTPN12-206ENST00000435495 ROS1P08922 2347 aa1.84□□□□□ -2.11
PTPN12-206ENST00000435495 C6orf48Q9UBA6 75 aa1.84□□□□□ -2.12
PTPN12-206ENST00000435495 ALMS1Q8TCU4 4167 aa1.84□□□□□ -2.12
PTPN12-206ENST00000435495 KRTAP9-6A8MVA2 160 aa1.83□□□□□ -2.12
PTPN12-206ENST00000435495 Q6ZSA8 131 aa1.83□□□□□ -2.12
PTPN12-206ENST00000435495 RPS27LQ71UM5 84 aaKnown RBP1.83□□□□□ -2.12
PTPN12-206ENST00000435495 SVEP1Q4LDE5 3571 aa1.83□□□□□ -2.12
PTPN12-206ENST00000435495 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
PTPN12-206ENST00000435495 KRTAP6-3Q3LI67 103 aa1.81□□□□□ -2.12
PTPN12-206ENST00000435495 MEGF8Q7Z7M0 2845 aa1.81□□□□□ -2.12
PTPN12-206ENST00000435495 ARHGAP5-AS1Q96IT6 56 aa1.81□□□□□ -2.12
PTPN12-206ENST00000435495 TENM1Q9UKZ4 2725 aa1.79□□□□□ -2.12
PTPN12-206ENST00000435495 MGAM2Q2M2H8 2515 aa1.79□□□□□ -2.12
PTPN12-206ENST00000435495 DEFB130BP0DP73 79 aa1.79□□□□□ -2.12
PTPN12-206ENST00000435495 DEFB130AP0DP74 79 aa1.79□□□□□ -2.12
PTPN12-206ENST00000435495 WFDC13Q8IUB5 93 aa1.79□□□□□ -2.12
PTPN12-206ENST00000435495 TRRAPQ9Y4A5 3859 aa1.78□□□□□ -2.12
PTPN12-206ENST00000435495 TTTY10Q9BZA0 68 aa1.78□□□□□ -2.12
PTPN12-206ENST00000435495 APLNQ9ULZ1 77 aa1.78□□□□□ -2.12
PTPN12-206ENST00000435495 PKD1L1Q8TDX9 2849 aa1.78□□□□□ -2.12
PTPN12-206ENST00000435495 CMYA5Q8N3K9 4069 aa1.77□□□□□ -2.13
PTPN12-206ENST00000435495 TGP01266 2768 aa1.77□□□□□ -2.13
PTPN12-206ENST00000435495 SPRR1AP35321 89 aa1.77□□□□□ -2.13
PTPN12-206ENST00000435495 RPS27P42677 84 aaKnown RBP1.77□□□□□ -2.13
PTPN12-206ENST00000435495 H1FX-AS1Q4G0G2 97 aa1.77□□□□□ -2.13
PTPN12-206ENST00000435495 WFDC10BQ8IUB3 73 aa1.77□□□□□ -2.13
PTPN12-206ENST00000435495 PRO0255Q9UI72 69 aa1.77□□□□□ -2.13
PTPN12-206ENST00000435495 PRKDCP78527 4128 aaKnown RBP1.77□□□□□ -2.13
PTPN12-206ENST00000435495 DEFB108BQ8NET1 73 aa1.76□□□□□ -2.13
PTPN12-206ENST00000435495 VWFP04275 2813 aa1.76□□□□□ -2.13
PTPN12-206ENST00000435495 MUC2Q02817 5179 aa1.76□□□□□ -2.13
PTPN12-206ENST00000435495 RPL39P62891 51 aaKnown RBP1.74□□□□□ -2.13
PTPN12-206ENST00000435495 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
PTPN12-206ENST00000435495 KMT2CQ8NEZ4 4911 aaKnown RBP1.74□□□□□ -2.13
PTPN12-206ENST00000435495 NOTCH1P46531 2555 aa1.74□□□□□ -2.13
PTPN12-206ENST00000435495 KAAG1Q9UBP8 84 aa1.73□□□□□ -2.13
PTPN12-206ENST00000435495 RYR3Q15413 4870 aa1.73□□□□□ -2.13
PTPN12-206ENST00000435495 POLR2KP53803 58 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms