RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 TRBV6-4A0A1B0GX49 114 aa3.41□□□□□ -1.86
RFC3-202ENST00000434425 COX6A2Q02221 97 aa3.41□□□□□ -1.86
RFC3-202ENST00000434425 Q5W150 140 aa3.41□□□□□ -1.86
RFC3-202ENST00000434425 LINC00308Q8TCZ7 52 aa3.41□□□□□ -1.86
RFC3-202ENST00000434425 ZNF625Q96I27 306 aaPredicted RBP3.41□□□□□ -1.86
RFC3-202ENST00000434425 A0A1B0GU33 70 aa3.41□□□□□ -1.86
RFC3-202ENST00000434425 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
RFC3-202ENST00000434425 DEFB4AO15263 64 aa3.41□□□□□ -1.86
RFC3-202ENST00000434425 Q6ZTI0 123 aa3.41□□□□□ -1.86
RFC3-202ENST00000434425 LINC00612Q8N6U2 182 aa3.41□□□□□ -1.86
RFC3-202ENST00000434425 LINC00846Q9NV44 126 aa3.41□□□□□ -1.86
RFC3-202ENST00000434425 ORMDL1Q9P0S3 153 aa3.41□□□□□ -1.86
RFC3-202ENST00000434425 LINC01558Q9Y6Z2 57 aa3.41□□□□□ -1.86
RFC3-202ENST00000434425 A0A1B0GUV1 79 aa3.4□□□□□ -1.87
RFC3-202ENST00000434425 M0R2N4 97 aa3.4□□□□□ -1.87
RFC3-202ENST00000434425 DNAH5Q8TE73 4624 aa3.39□□□□□ -1.87
RFC3-202ENST00000434425 C9orf163Q8N9P6 203 aa3.39□□□□□ -1.87
RFC3-202ENST00000434425 NOP10Q9NPE3 64 aaKnown RBP3.39□□□□□ -1.87
RFC3-202ENST00000434425 DNAL4O96015 105 aa3.38□□□□□ -1.87
RFC3-202ENST00000434425 KRTAP25-1Q3LHN0 102 aa3.38□□□□□ -1.87
RFC3-202ENST00000434425 HIGD2BQ4VC39 106 aa3.38□□□□□ -1.87
RFC3-202ENST00000434425 DMAC1Q96GE9 116 aa3.38□□□□□ -1.87
RFC3-202ENST00000434425 KLK12Q9UKR0 248 aa3.38□□□□□ -1.87
RFC3-202ENST00000434425 IGLV7-43P04211 117 aa3.37□□□□□ -1.87
RFC3-202ENST00000434425 SPAG11BQ08648 103 aa3.37□□□□□ -1.87
RFC3-202ENST00000434425 NREPQ16612 68 aa3.37□□□□□ -1.87
RFC3-202ENST00000434425 C9orf129Q5T035 196 aaKnown RBP3.37□□□□□ -1.87
RFC3-202ENST00000434425 SPAG11AQ6PDA7 123 aa3.37□□□□□ -1.87
RFC3-202ENST00000434425 COX7B2Q8TF08 81 aa3.37□□□□□ -1.87
RFC3-202ENST00000434425 TRGV2A0A075B6R0 118 aa3.36□□□□□ -1.87
RFC3-202ENST00000434425 TRGV4A0A0C4DH28 118 aa3.36□□□□□ -1.87
RFC3-202ENST00000434425 ZCCHC13Q8WW36 166 aaKnown RBP3.36□□□□□ -1.87
RFC3-202ENST00000434425 DMBT1Q9UGM3 2413 aaPredicted RBP3.36□□□□□ -1.87
RFC3-202ENST00000434425 VPS13BQ7Z7G8 4022 aa3.36□□□□□ -1.87
RFC3-202ENST00000434425 FAT1Q14517 4588 aa3.36□□□□□ -1.87
RFC3-202ENST00000434425 LRCOL1A6NCL2 159 aa3.35□□□□□ -1.87
RFC3-202ENST00000434425 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
RFC3-202ENST00000434425 IGLV4-60A0A075B6I1 120 aa3.35□□□□□ -1.87
RFC3-202ENST00000434425 DEFB131BA0A096LNP1 70 aa3.35□□□□□ -1.87
RFC3-202ENST00000434425 LINC00959A0A1B0GUT2 108 aa3.35□□□□□ -1.87
RFC3-202ENST00000434425 H0YGX0 51 aa3.35□□□□□ -1.87
RFC3-202ENST00000434425 IGKV2-28A0A075B6P5 120 aa3.34□□□□□ -1.88
RFC3-202ENST00000434425 IGKV2D-28P01615 120 aa3.34□□□□□ -1.88
RFC3-202ENST00000434425 CCL18P55774 89 aa3.34□□□□□ -1.88
RFC3-202ENST00000434425 ENHOQ6UWT2 76 aa3.34□□□□□ -1.88
RFC3-202ENST00000434425 Q8IZM0 81 aa3.34□□□□□ -1.88
RFC3-202ENST00000434425 PRO0255Q9UI72 69 aa3.34□□□□□ -1.88
RFC3-202ENST00000434425 NDUFB1O75438 58 aa3.33□□□□□ -1.88
RFC3-202ENST00000434425 ST20-AS1Q8NBB2 130 aa3.33□□□□□ -1.88
RFC3-202ENST00000434425 LINC00158P58513 81 aa3.32□□□□□ -1.88
RFC3-202ENST00000434425 COX17Q14061 63 aa3.32□□□□□ -1.88
RFC3-202ENST00000434425 SPRR4Q96PI1 79 aa3.32□□□□□ -1.88
RFC3-202ENST00000434425 UBR4Q5T4S7 5183 aa3.31□□□□□ -1.88
RFC3-202ENST00000434425 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
RFC3-202ENST00000434425 UBE2DNLQ8IWF7 75 aa3.31□□□□□ -1.88
RFC3-202ENST00000434425 SMIM11BQ8TCY0 68 aa3.31□□□□□ -1.88
RFC3-202ENST00000434425 DEFB130BP0DP73 79 aa3.3□□□□□ -1.88
RFC3-202ENST00000434425 DEFB130AP0DP74 79 aa3.3□□□□□ -1.88
RFC3-202ENST00000434425 TOMM7Q9P0U1 55 aa3.3□□□□□ -1.88
RFC3-202ENST00000434425 SPATA8Q6RVD6 105 aa3.29□□□□□ -1.88
RFC3-202ENST00000434425 LINC00208Q96KT6 92 aa3.29□□□□□ -1.88
RFC3-202ENST00000434425 UBL5Q9BZL1 73 aa3.29□□□□□ -1.88
RFC3-202ENST00000434425 A0A087WYN8 130 aa3.28□□□□□ -1.88
RFC3-202ENST00000434425 IGKV2-30P06310 120 aa3.28□□□□□ -1.88
RFC3-202ENST00000434425 SPART-AS1P0CW21 52 aa3.28□□□□□ -1.88
RFC3-202ENST00000434425 SPINK7P58062 85 aa3.28□□□□□ -1.88
RFC3-202ENST00000434425 GVQW2A0A096LPI5 108 aaPredicted RBP3.28□□□□□ -1.88
RFC3-202ENST00000434425 IGKV3OR2-268A0A0C4DH90 116 aa3.28□□□□□ -1.88
RFC3-202ENST00000434425 HTN3P15516 51 aa3.28□□□□□ -1.88
RFC3-202ENST00000434425 DEFB116Q30KQ4 102 aa3.28□□□□□ -1.88
RFC3-202ENST00000434425 LELP1Q5T871 98 aa3.28□□□□□ -1.88
RFC3-202ENST00000434425 NBDYA0A0U1RRE5 68 aa3.27□□□□□ -1.89
RFC3-202ENST00000434425 FAM168BA1KXE4 195 aa3.27□□□□□ -1.89
RFC3-202ENST00000434425 H3BNG1 76 aa3.27□□□□□ -1.89
RFC3-202ENST00000434425 JMJD7-PLA2G4BH0Y9G9 81 aa3.26□□□□□ -1.89
RFC3-202ENST00000434425 UQCR11O14957 56 aa3.26□□□□□ -1.89
RFC3-202ENST00000434425 ZNF861PO60384 105 aa3.26□□□□□ -1.89
RFC3-202ENST00000434425 PDE6GP18545 87 aa3.26□□□□□ -1.89
RFC3-202ENST00000434425 DNAH8Q96JB1 4490 aa3.25□□□□□ -1.89
RFC3-202ENST00000434425 A0A096LPF7 62 aa3.25□□□□□ -1.89
RFC3-202ENST00000434425 H0Y9P7 68 aa3.25□□□□□ -1.89
RFC3-202ENST00000434425 IGLV6-57P01721 117 aa3.25□□□□□ -1.89
RFC3-202ENST00000434425 ANGP03950 147 aaKnown RBP3.25□□□□□ -1.89
RFC3-202ENST00000434425 HIGD2AQ9BW72 106 aa3.25□□□□□ -1.89
RFC3-202ENST00000434425 LINC00575Q6W349 94 aa3.24□□□□□ -1.89
RFC3-202ENST00000434425 TYMSOSQ8TAI1 123 aa3.24□□□□□ -1.89
RFC3-202ENST00000434425 KRTAP1-5Q9BYS1 174 aa3.24□□□□□ -1.89
RFC3-202ENST00000434425 PRO2289Q9P1D8 64 aa3.24□□□□□ -1.89
RFC3-202ENST00000434425 LRP1Q07954 4544 aaKnown RBP3.23□□□□□ -1.89
RFC3-202ENST00000434425 LOC110117498A0A087WWA1 95 aa3.23□□□□□ -1.89
RFC3-202ENST00000434425 CLPSL2Q6UWE3 100 aa3.23□□□□□ -1.89
RFC3-202ENST00000434425 UNQ6190/PRO20217Q6UXQ8 127 aa3.23□□□□□ -1.89
RFC3-202ENST00000434425 PSORS1C2Q9UIG4 136 aa3.23□□□□□ -1.89
RFC3-202ENST00000434425 HMCN2Q8NDA2 5059 aa3.23□□□□□ -1.89
RFC3-202ENST00000434425 NCR3O14931 201 aa3.22□□□□□ -1.89
RFC3-202ENST00000434425 SMR3BP02814 79 aaPredicted RBP3.22□□□□□ -1.89
RFC3-202ENST00000434425 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
RFC3-202ENST00000434425 Q5VSD8 79 aa3.22□□□□□ -1.89
RFC3-202ENST00000434425 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
RFC3-202ENST00000434425 A0A087WTM6 91 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms