RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 HECTD4Q9Y4D8 3996 aa9.35□□□□□ -0.91
SCARF1-203ENST00000434376 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
SCARF1-203ENST00000434376 A0A087X002 238 aa9.34□□□□□ -0.91
SCARF1-203ENST00000434376 NOTCH2NLQ7Z3S9 236 aa9.34□□□□□ -0.91
SCARF1-203ENST00000434376 FLG2Q5D862 2391 aaPredicted RBP9.33□□□□□ -0.92
SCARF1-203ENST00000434376 DNAH8Q96JB1 4490 aa9.32□□□□□ -0.92
SCARF1-203ENST00000434376 KRTAP10-1P60331 282 aa9.31□□□□□ -0.92
SCARF1-203ENST00000434376 KRTAP13-1Q8IUC0 172 aa9.31□□□□□ -0.92
SCARF1-203ENST00000434376 LINC00472Q9H8W2 130 aa9.31□□□□□ -0.92
SCARF1-203ENST00000434376 WWC2-AS2Q96NR7 200 aa9.3□□□□□ -0.92
SCARF1-203ENST00000434376 LCA10Q71F78 164 aa9.29□□□□□ -0.92
SCARF1-203ENST00000434376 IGLV7-43P04211 117 aa9.28□□□□□ -0.92
SCARF1-203ENST00000434376 SPANXA2-OT1Q8N9U9 137 aa9.28□□□□□ -0.92
SCARF1-203ENST00000434376 MMP24-AS1A0A0U1RRL7 71 aa9.28□□□□□ -0.92
SCARF1-203ENST00000434376 IGLV8-61A0A075B6I0 122 aa9.27□□□□□ -0.93
SCARF1-203ENST00000434376 LRP1BQ9NZR2 4599 aa9.27□□□□□ -0.93
SCARF1-203ENST00000434376 CD164Q04900 197 aa9.27□□□□□ -0.93
SCARF1-203ENST00000434376 DMBT1Q9UGM3 2413 aaPredicted RBP9.27□□□□□ -0.93
SCARF1-203ENST00000434376 PLAC8Q9NZF1 115 aa9.26□□□□□ -0.93
SCARF1-203ENST00000434376 SPRR1BP22528 89 aa9.25□□□□□ -0.93
SCARF1-203ENST00000434376 H3BPC8 53 aa9.25□□□□□ -0.93
SCARF1-203ENST00000434376 ZNF706Q9Y5V0 76 aaPredicted RBP9.25□□□□□ -0.93
SCARF1-203ENST00000434376 DYNC2H1Q8NCM8 4307 aaKnown RBP9.23□□□□□ -0.93
SCARF1-203ENST00000434376 LOC101927531A0A1B0GV80 90 aa9.22□□□□□ -0.93
SCARF1-203ENST00000434376 KTN1-AS1Q86SY8 53 aa9.21□□□□□ -0.94
SCARF1-203ENST00000434376 IGLV7-46A0A075B6I9 117 aa9.2□□□□□ -0.94
SCARF1-203ENST00000434376 PRR26Q8N8Z3 221 aa9.2□□□□□ -0.94
SCARF1-203ENST00000434376 C8orf17Q9NRJ1 99 aa9.19□□□□□ -0.94
SCARF1-203ENST00000434376 SPINK7P58062 85 aa9.19□□□□□ -0.94
SCARF1-203ENST00000434376 RBM12B-AS1Q9P1G2 102 aa9.19□□□□□ -0.94
SCARF1-203ENST00000434376 PKHD1P08F94 4074 aa9.19□□□□□ -0.94
SCARF1-203ENST00000434376 ATP11AUNQ6ZP68 121 aa9.18□□□□□ -0.94
SCARF1-203ENST00000434376 Q75L30 129 aa9.18□□□□□ -0.94
SCARF1-203ENST00000434376 Q96NJ1 140 aa9.17□□□□□ -0.94
SCARF1-203ENST00000434376 DNAH5Q8TE73 4624 aa9.16□□□□□ -0.94
SCARF1-203ENST00000434376 FAT1Q14517 4588 aa9.14□□□□□ -0.95
SCARF1-203ENST00000434376 HRES1P13985 223 aa9.14□□□□□ -0.95
SCARF1-203ENST00000434376 A0A1B0GVX0 72 aa9.14□□□□□ -0.95
SCARF1-203ENST00000434376 PLA2G1BP04054 148 aaKnown RBP9.14□□□□□ -0.95
SCARF1-203ENST00000434376 CDC42SE1Q9NRR8 79 aa9.12□□□□□ -0.95
SCARF1-203ENST00000434376 TP53AIP1Q9HCN2 124 aa9.12□□□□□ -0.95
SCARF1-203ENST00000434376 LINC00483Q53H64 154 aa9.1□□□□□ -0.95
SCARF1-203ENST00000434376 MRPL34Q9BQ48 92 aaKnown RBP9.1□□□□□ -0.95
SCARF1-203ENST00000434376 C4orf48Q5BLP8 95 aa9.08□□□□□ -0.96
SCARF1-203ENST00000434376 KRTAP13-2Q52LG2 175 aa9.08□□□□□ -0.96
SCARF1-203ENST00000434376 FAT2Q9NYQ8 4349 aa9.07□□□□□ -0.96
SCARF1-203ENST00000434376 LINC01558Q9Y6Z2 57 aa9.06□□□□□ -0.96
SCARF1-203ENST00000434376 VPS13BQ7Z7G8 4022 aa9.06□□□□□ -0.96
SCARF1-203ENST00000434376 A6NN06 94 aa9.06□□□□□ -0.96
SCARF1-203ENST00000434376 Q5W150 140 aa9.05□□□□□ -0.96
SCARF1-203ENST00000434376 PRAC1Q96KF2 57 aa9.05□□□□□ -0.96
SCARF1-203ENST00000434376 TYMSOSQ8TAI1 123 aa9.03□□□□□ -0.96
SCARF1-203ENST00000434376 C7orf65Q6ZTY9 151 aa9.02□□□□□ -0.97
SCARF1-203ENST00000434376 IGKV2D-30A0A075B6S6 120 aa9.02□□□□□ -0.97
SCARF1-203ENST00000434376 IGKV2-30P06310 120 aa9.02□□□□□ -0.97
SCARF1-203ENST00000434376 LINC00313P59037 77 aa8.99□□□□□ -0.97
SCARF1-203ENST00000434376 ALMS1Q8TCU4 4167 aa8.98□□□□□ -0.97
SCARF1-203ENST00000434376 C9orf92A6NGG3 77 aa8.98□□□□□ -0.97
SCARF1-203ENST00000434376 KMT2CQ8NEZ4 4911 aaKnown RBP8.97□□□□□ -0.97
SCARF1-203ENST00000434376 ADM2Q7Z4H4 148 aa8.96□□□□□ -0.98
SCARF1-203ENST00000434376 SSBP3-AS1Q7Z2R9 100 aa8.95□□□□□ -0.98
SCARF1-203ENST00000434376 ACYP2P14621 99 aa8.93□□□□□ -0.98
SCARF1-203ENST00000434376 SACSQ9NZJ4 4579 aa8.93□□□□□ -0.98
SCARF1-203ENST00000434376 A0A1B0GU69 56 aa8.93□□□□□ -0.98
SCARF1-203ENST00000434376 DYNC1H1Q14204 4646 aaKnown RBP8.9□□□□□ -0.98
SCARF1-203ENST00000434376 KRTAP1-4P0C5Y4 121 aa8.9□□□□□ -0.99
SCARF1-203ENST00000434376 SPINK1P00995 79 aa8.89□□□□□ -0.99
SCARF1-203ENST00000434376 ASB16-AS1Q495Z4 193 aa8.89□□□□□ -0.99
SCARF1-203ENST00000434376 Q6ZSA8 131 aa8.88□□□□□ -0.99
SCARF1-203ENST00000434376 PKD1P98161 4303 aa8.88□□□□□ -0.99
SCARF1-203ENST00000434376 LINC00304Q8N9R0 145 aa8.83□□□□□ -1
SCARF1-203ENST00000434376 MYCBP2O75592 4640 aa8.82□□□□□ -1
SCARF1-203ENST00000434376 Q8N1X5 172 aa8.8□□□□□ -1
SCARF1-203ENST00000434376 LRP1Q07954 4544 aaKnown RBP8.78□□□□□ -1
SCARF1-203ENST00000434376 MIR22HGQ0VDD5 57 aa8.77□□□□□ -1.01
SCARF1-203ENST00000434376 C8orf87E5RJ46 101 aa8.74□□□□□ -1.01
SCARF1-203ENST00000434376 FAM229AH3BQW9 127 aa8.74□□□□□ -1.01
SCARF1-203ENST00000434376 APOBP04114 4563 aaKnown RBP8.73□□□□□ -1.01
SCARF1-203ENST00000434376 DMAC1Q96GE9 116 aa8.72□□□□□ -1.01
SCARF1-203ENST00000434376 UQCR11O14957 56 aa8.72□□□□□ -1.01
SCARF1-203ENST00000434376 KRTAP13-3Q3SY46 172 aa8.69□□□□□ -1.02
SCARF1-203ENST00000434376 LINC01554Q52M75 96 aa8.66□□□□□ -1.02
SCARF1-203ENST00000434376 CSAG1Q6PB30 78 aa8.65□□□□□ -1.02
SCARF1-203ENST00000434376 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.03
SCARF1-203ENST00000434376 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
SCARF1-203ENST00000434376 KRTAP16-1A8MUX0 517 aa8.61□□□□□ -1.03
SCARF1-203ENST00000434376 SPATA8Q6RVD6 105 aa8.61□□□□□ -1.03
SCARF1-203ENST00000434376 RYR2Q92736 4967 aa8.6□□□□□ -1.03
SCARF1-203ENST00000434376 RYR3Q15413 4870 aa8.56□□□□□ -1.04
SCARF1-203ENST00000434376 A0A1B0GVY2 172 aa8.56□□□□□ -1.04
SCARF1-203ENST00000434376 Q5VSD8 79 aa8.54□□□□□ -1.04
SCARF1-203ENST00000434376 KRTAP21-3Q3LHN1 58 aa8.53□□□□□ -1.04
SCARF1-203ENST00000434376 CRIPTQ9P021 101 aa8.49□□□□□ -1.05
SCARF1-203ENST00000434376 H3BS24 57 aa8.49□□□□□ -1.05
SCARF1-203ENST00000434376 RYR1P21817 5038 aa8.44□□□□□ -1.06
SCARF1-203ENST00000434376 KRTAP10-4P60372 401 aaPredicted RBP8.43□□□□□ -1.06
SCARF1-203ENST00000434376 KRTAP17-1Q9BYP8 105 aa8.4□□□□□ -1.06
SCARF1-203ENST00000434376 EPPK1P58107 5090 aaKnown RBP8.35□□□□□ -1.07
SCARF1-203ENST00000434376 PKHD1L1Q86WI1 4243 aa8.35□□□□□ -1.07
SCARF1-203ENST00000434376 HSPG2P98160 4391 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms