RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 Q96NJ1 140 aa9.28□□□□□ -0.92
TTC28-202ENST00000431039 KRTAP9-6A0A140TA67 174 aa9.26□□□□□ -0.93
TTC28-202ENST00000431039 J3KT08 172 aa9.24□□□□□ -0.93
TTC28-202ENST00000431039 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
TTC28-202ENST00000431039 IGKV4-1P06312 121 aa9.21□□□□□ -0.94
TTC28-202ENST00000431039 DEFB116Q30KQ4 102 aa9.21□□□□□ -0.94
TTC28-202ENST00000431039 SIGMAR1Q99720 223 aa9.21□□□□□ -0.94
TTC28-202ENST00000431039 BPY2O14599 106 aa9.2□□□□□ -0.94
TTC28-202ENST00000431039 LINC00643Q86TS7 51 aa9.18□□□□□ -0.94
TTC28-202ENST00000431039 DSCR10P59022 87 aa9.16□□□□□ -0.94
TTC28-202ENST00000431039 CXCL6P80162 114 aa9.16□□□□□ -0.94
TTC28-202ENST00000431039 A8MWP4 228 aa9.15□□□□□ -0.94
TTC28-202ENST00000431039 ATP5EP2Q5VTU8 51 aa9.15□□□□□ -0.94
TTC28-202ENST00000431039 NDUFB1O75438 58 aa9.13□□□□□ -0.95
TTC28-202ENST00000431039 IGKV3D-7A0A0C4DH55 119 aa9.12□□□□□ -0.95
TTC28-202ENST00000431039 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
TTC28-202ENST00000431039 KRTAP13-3Q3SY46 172 aa9.11□□□□□ -0.95
TTC28-202ENST00000431039 PRR15Q8IV56 129 aa9.11□□□□□ -0.95
TTC28-202ENST00000431039 K7EQZ3 153 aa9.08□□□□□ -0.96
TTC28-202ENST00000431039 KRTAP4-1Q9BYQ7 146 aa9.07□□□□□ -0.96
TTC28-202ENST00000431039 IGHV6-1A0A0B4J1U7 121 aa9.06□□□□□ -0.96
TTC28-202ENST00000431039 C8orf87E5RJ46 101 aa9.06□□□□□ -0.96
TTC28-202ENST00000431039 Q8N9L7 120 aa9.05□□□□□ -0.96
TTC28-202ENST00000431039 LINC00313P59037 77 aa9.04□□□□□ -0.96
TTC28-202ENST00000431039 SEC61BP60468 96 aaKnown RBP9.02□□□□□ -0.97
TTC28-202ENST00000431039 NOTCH2NLQ7Z3S9 236 aa9.02□□□□□ -0.97
TTC28-202ENST00000431039 C8orf17Q9NRJ1 99 aa9.02□□□□□ -0.97
TTC28-202ENST00000431039 FSIP2Q5CZC0 6907 aa9.01□□□□□ -0.97
TTC28-202ENST00000431039 MMP24-AS1A0A0U1RRL7 71 aa8.99□□□□□ -0.97
TTC28-202ENST00000431039 C9orf92A6NGG3 77 aa8.99□□□□□ -0.97
TTC28-202ENST00000431039 MT-ATP8P03928 68 aa8.99□□□□□ -0.97
TTC28-202ENST00000431039 HIST1H4AP62805 103 aaKnown RBP8.98□□□□□ -0.97
TTC28-202ENST00000431039 LCE2DQ5TA82 110 aaPredicted RBP8.97□□□□□ -0.97
TTC28-202ENST00000431039 IMUPQ9GZP8 106 aa8.97□□□□□ -0.97
TTC28-202ENST00000431039 KRTAP16-1A8MUX0 517 aa8.95□□□□□ -0.98
TTC28-202ENST00000431039 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
TTC28-202ENST00000431039 hDV103S1A0JD37 113 aa8.94□□□□□ -0.98
TTC28-202ENST00000431039 CASC2Q6XLA1 102 aa8.93□□□□□ -0.98
TTC28-202ENST00000431039 TMEM254Q8TBM7 123 aa8.93□□□□□ -0.98
TTC28-202ENST00000431039 XP32Q5T750 250 aa8.92□□□□□ -0.98
TTC28-202ENST00000431039 A0A087WVE0 104 aa8.91□□□□□ -0.98
TTC28-202ENST00000431039 WFDC13Q8IUB5 93 aa8.91□□□□□ -0.98
TTC28-202ENST00000431039 MRPL34Q9BQ48 92 aaKnown RBP8.91□□□□□ -0.98
TTC28-202ENST00000431039 C20orf166-AS1Q96NR2 134 aa8.9□□□□□ -0.98
TTC28-202ENST00000431039 CRCT1Q9UGL9 99 aa8.89□□□□□ -0.99
TTC28-202ENST00000431039 A8MUU9 505 aa8.88□□□□□ -0.99
TTC28-202ENST00000431039 Q8N9P0 234 aaPredicted RBP8.88□□□□□ -0.99
TTC28-202ENST00000431039 Q75L30 129 aa8.87□□□□□ -0.99
TTC28-202ENST00000431039 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
TTC28-202ENST00000431039 RPL37P61927 97 aaKnown RBP8.84□□□□□ -0.99
TTC28-202ENST00000431039 KRTAP19-2Q3LHN2 52 aa8.81□□□□□ -1
TTC28-202ENST00000431039 PCOTHQ58A44 107 aa8.8□□□□□ -1
TTC28-202ENST00000431039 NDUFS5O43920 106 aa8.79□□□□□ -1
TTC28-202ENST00000431039 MT1HP80294 61 aa8.79□□□□□ -1
TTC28-202ENST00000431039 FAM236AA0A1B0GUQ0 79 aa8.76□□□□□ -1.01
TTC28-202ENST00000431039 FAM236BA0A1B0GV22 79 aa8.76□□□□□ -1.01
TTC28-202ENST00000431039 TP53AIP1Q9HCN2 124 aa8.76□□□□□ -1.01
TTC28-202ENST00000431039 SCGB1A1P11684 91 aa8.75□□□□□ -1.01
TTC28-202ENST00000431039 ATP11AUNQ6ZP68 121 aa8.75□□□□□ -1.01
TTC28-202ENST00000431039 ZCCHC13Q8WW36 166 aaKnown RBP8.73□□□□□ -1.01
TTC28-202ENST00000431039 UQCRQO14949 82 aa8.7□□□□□ -1.02
TTC28-202ENST00000431039 OCR1Q9BZK8 76 aa8.7□□□□□ -1.02
TTC28-202ENST00000431039 Q5W150 140 aa8.68□□□□□ -1.02
TTC28-202ENST00000431039 ATOX1O00244 68 aa8.67□□□□□ -1.02
TTC28-202ENST00000431039 LORP23490 312 aaPredicted RBP8.67□□□□□ -1.02
TTC28-202ENST00000431039 KRTAP10-6P60371 365 aaPredicted RBP8.67□□□□□ -1.02
TTC28-202ENST00000431039 SMIM20Q8N5G0 67 aa8.67□□□□□ -1.02
TTC28-202ENST00000431039 FLGP20930 4061 aaPredicted RBP8.66□□□□□ -1.02
TTC28-202ENST00000431039 M0R2T5 61 aa8.63□□□□□ -1.03
TTC28-202ENST00000431039 TRAV7A0A075B6U4 112 aa8.62□□□□□ -1.03
TTC28-202ENST00000431039 TRAV22A0A0B4J277 110 aa8.61□□□□□ -1.03
TTC28-202ENST00000431039 C5orf47Q569G3 176 aa8.59□□□□□ -1.03
TTC28-202ENST00000431039 COX6B2Q6YFQ2 88 aa8.59□□□□□ -1.03
TTC28-202ENST00000431039 H0Y9P7 68 aa8.57□□□□□ -1.04
TTC28-202ENST00000431039 SERP2Q8N6R1 65 aa8.56□□□□□ -1.04
TTC28-202ENST00000431039 MP68P56378 58 aa8.55□□□□□ -1.04
TTC28-202ENST00000431039 SPINK7P58062 85 aa8.54□□□□□ -1.04
TTC28-202ENST00000431039 H3BPC8 53 aa8.53□□□□□ -1.04
TTC28-202ENST00000431039 IGKV2-30P06310 120 aa8.53□□□□□ -1.04
TTC28-202ENST00000431039 IGKV2D-30A0A075B6S6 120 aa8.51□□□□□ -1.05
TTC28-202ENST00000431039 LOC101927531A0A1B0GV80 90 aa8.51□□□□□ -1.05
TTC28-202ENST00000431039 C7orf65Q6ZTY9 151 aa8.51□□□□□ -1.05
TTC28-202ENST00000431039 C1orf64Q8NEQ6 169 aa8.49□□□□□ -1.05
TTC28-202ENST00000431039 LINC00208Q96KT6 92 aa8.49□□□□□ -1.05
TTC28-202ENST00000431039 ANAPC13Q9BS18 74 aa8.47□□□□□ -1.05
TTC28-202ENST00000431039 CYP4F30PQ9H0H9 118 aa8.47□□□□□ -1.05
TTC28-202ENST00000431039 COX7CP15954 63 aa8.46□□□□□ -1.06
TTC28-202ENST00000431039 HRES1P13985 223 aa8.43□□□□□ -1.06
TTC28-202ENST00000431039 USH2AO75445 5202 aa8.4□□□□□ -1.06
TTC28-202ENST00000431039 C20orf197Q8N268 126 aa8.4□□□□□ -1.06
TTC28-202ENST00000431039 SSPOA2VEC9 5147 aa8.38□□□□□ -1.07
TTC28-202ENST00000431039 MPLKIPQ8TAP9 179 aa8.38□□□□□ -1.07
TTC28-202ENST00000431039 SNURFQ9Y675 71 aa8.36□□□□□ -1.07
TTC28-202ENST00000431039 KLKP1Q107X0 134 aa8.35□□□□□ -1.07
TTC28-202ENST00000431039 RBM12B-AS1Q9P1G2 102 aa8.33□□□□□ -1.08
TTC28-202ENST00000431039 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.3□□□□□ -1.08
TTC28-202ENST00000431039 C4orf26Q17RF5 130 aa8.3□□□□□ -1.08
TTC28-202ENST00000431039 KRTAP9-7A8MTY7 169 aa8.29□□□□□ -1.08
TTC28-202ENST00000431039 CCDC179H3BU77 68 aa8.28□□□□□ -1.08
TTC28-202ENST00000431039 NDUFC1O43677 76 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms