RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 IGLV7-46A0A075B6I9 117 aa7.45□□□□□ -1.22
CDH3-202ENST00000429102 IGLV5-52A0A0A0MRZ9 124 aa7.45□□□□□ -1.22
CDH3-202ENST00000429102 Q5W150 140 aa7.45□□□□□ -1.22
CDH3-202ENST00000429102 SPANXA2-OT1Q8N9U9 137 aa7.45□□□□□ -1.22
CDH3-202ENST00000429102 WWC2-AS2Q96NR7 200 aa7.44□□□□□ -1.22
CDH3-202ENST00000429102 H3BPC8 53 aa7.43□□□□□ -1.22
CDH3-202ENST00000429102 HRES1P13985 223 aa7.43□□□□□ -1.22
CDH3-202ENST00000429102 STARD9Q9P2P6 4700 aa7.43□□□□□ -1.22
CDH3-202ENST00000429102 Q6ZRN7 208 aaPredicted RBP7.42□□□□□ -1.22
CDH3-202ENST00000429102 KRTAP13-1Q8IUC0 172 aa7.42□□□□□ -1.22
CDH3-202ENST00000429102 IGKV2D-30A0A075B6S6 120 aa7.42□□□□□ -1.22
CDH3-202ENST00000429102 IGKV2-30P06310 120 aa7.42□□□□□ -1.22
CDH3-202ENST00000429102 PRAC1Q96KF2 57 aa7.41□□□□□ -1.22
CDH3-202ENST00000429102 ZNF861PO60384 105 aa7.41□□□□□ -1.22
CDH3-202ENST00000429102 NUPR2A6NF83 97 aa7.4□□□□□ -1.23
CDH3-202ENST00000429102 TP53AIP1Q9HCN2 124 aa7.4□□□□□ -1.23
CDH3-202ENST00000429102 RBM12B-AS1Q9P1G2 102 aa7.4□□□□□ -1.23
CDH3-202ENST00000429102 KTN1-AS1Q86SY8 53 aa7.39□□□□□ -1.23
CDH3-202ENST00000429102 DNAH8Q96JB1 4490 aa7.39□□□□□ -1.23
CDH3-202ENST00000429102 DMBT1Q9UGM3 2413 aaPredicted RBP7.38□□□□□ -1.23
CDH3-202ENST00000429102 ZNF706Q9Y5V0 76 aaPredicted RBP7.38□□□□□ -1.23
CDH3-202ENST00000429102 DNHD1Q96M86 4753 aa7.37□□□□□ -1.23
CDH3-202ENST00000429102 ATP11AUNQ6ZP68 121 aa7.37□□□□□ -1.23
CDH3-202ENST00000429102 FLG2Q5D862 2391 aaPredicted RBP7.35□□□□□ -1.23
CDH3-202ENST00000429102 Q75L30 129 aa7.35□□□□□ -1.23
CDH3-202ENST00000429102 DNAH17Q9UFH2 4485 aa7.34□□□□□ -1.23
CDH3-202ENST00000429102 PRKDCP78527 4128 aaKnown RBP7.34□□□□□ -1.24
CDH3-202ENST00000429102 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
CDH3-202ENST00000429102 A0A1B0GU69 56 aa7.32□□□□□ -1.24
CDH3-202ENST00000429102 C1orf134Q5TEV5 83 aa7.32□□□□□ -1.24
CDH3-202ENST00000429102 IGLV7-43P04211 117 aa7.31□□□□□ -1.24
CDH3-202ENST00000429102 DNAH11Q96DT5 4516 aa7.31□□□□□ -1.24
CDH3-202ENST00000429102 Q6ZR54 194 aa7.31□□□□□ -1.24
CDH3-202ENST00000429102 ADM2Q7Z4H4 148 aa7.3□□□□□ -1.24
CDH3-202ENST00000429102 DNAH2Q9P225 4427 aa7.3□□□□□ -1.24
CDH3-202ENST00000429102 ACYP2P14621 99 aa7.29□□□□□ -1.24
CDH3-202ENST00000429102 LINC00313P59037 77 aa7.29□□□□□ -1.24
CDH3-202ENST00000429102 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
CDH3-202ENST00000429102 LINC00483Q53H64 154 aa7.29□□□□□ -1.24
CDH3-202ENST00000429102 DNAH6Q9C0G6 4158 aa7.28□□□□□ -1.24
CDH3-202ENST00000429102 LINC01558Q9Y6Z2 57 aa7.28□□□□□ -1.24
CDH3-202ENST00000429102 VPS13DQ5THJ4 4388 aa7.28□□□□□ -1.24
CDH3-202ENST00000429102 HECTD4Q9Y4D8 3996 aa7.26□□□□□ -1.25
CDH3-202ENST00000429102 C7orf65Q6ZTY9 151 aa7.26□□□□□ -1.25
CDH3-202ENST00000429102 PLAC8Q9NZF1 115 aa7.26□□□□□ -1.25
CDH3-202ENST00000429102 ASB16-AS1Q495Z4 193 aa7.24□□□□□ -1.25
CDH3-202ENST00000429102 Q8N1X5 172 aa7.23□□□□□ -1.25
CDH3-202ENST00000429102 C4orf48Q5BLP8 95 aa7.23□□□□□ -1.25
CDH3-202ENST00000429102 A6NN06 94 aa7.22□□□□□ -1.25
CDH3-202ENST00000429102 LRP1BQ9NZR2 4599 aa7.19□□□□□ -1.26
CDH3-202ENST00000429102 KRTAP13-2Q52LG2 175 aa7.17□□□□□ -1.26
CDH3-202ENST00000429102 MIR22HGQ0VDD5 57 aa7.16□□□□□ -1.26
CDH3-202ENST00000429102 PLA2G1BP04054 148 aaKnown RBP7.15□□□□□ -1.26
CDH3-202ENST00000429102 SMR3BP02814 79 aaPredicted RBP7.15□□□□□ -1.27
CDH3-202ENST00000429102 KRTAP10-1P60331 282 aa7.15□□□□□ -1.27
CDH3-202ENST00000429102 FAM229AH3BQW9 127 aa7.14□□□□□ -1.27
CDH3-202ENST00000429102 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
CDH3-202ENST00000429102 C9orf92A6NGG3 77 aa7.12□□□□□ -1.27
CDH3-202ENST00000429102 UQCR11O14957 56 aa7.11□□□□□ -1.27
CDH3-202ENST00000429102 C8orf87E5RJ46 101 aa7.1□□□□□ -1.27
CDH3-202ENST00000429102 KRTAP13-3Q3SY46 172 aa7.1□□□□□ -1.27
CDH3-202ENST00000429102 TYMSOSQ8TAI1 123 aa7.09□□□□□ -1.27
CDH3-202ENST00000429102 CRIPTQ9P021 101 aa7.09□□□□□ -1.27
CDH3-202ENST00000429102 DMAC1Q96GE9 116 aa7.08□□□□□ -1.28
CDH3-202ENST00000429102 DYNC2H1Q8NCM8 4307 aaKnown RBP7.07□□□□□ -1.28
CDH3-202ENST00000429102 DNAH5Q8TE73 4624 aa7.06□□□□□ -1.28
CDH3-202ENST00000429102 HYDINQ4G0P3 5121 aa7.06□□□□□ -1.28
CDH3-202ENST00000429102 ALMS1Q8TCU4 4167 aa7.06□□□□□ -1.28
CDH3-202ENST00000429102 CSAG1Q6PB30 78 aa7.06□□□□□ -1.28
CDH3-202ENST00000429102 VPS13BQ7Z7G8 4022 aa7.02□□□□□ -1.29
CDH3-202ENST00000429102 FAT2Q9NYQ8 4349 aa6.99□□□□□ -1.29
CDH3-202ENST00000429102 FAT1Q14517 4588 aa6.98□□□□□ -1.29
CDH3-202ENST00000429102 LINC01554Q52M75 96 aa6.98□□□□□ -1.29
CDH3-202ENST00000429102 KRTAP16-1A8MUX0 517 aa6.97□□□□□ -1.29
CDH3-202ENST00000429102 KRTAP1-4P0C5Y4 121 aa6.97□□□□□ -1.29
CDH3-202ENST00000429102 PKHD1P08F94 4074 aa6.94□□□□□ -1.3
CDH3-202ENST00000429102 LINC00304Q8N9R0 145 aa6.92□□□□□ -1.3
CDH3-202ENST00000429102 SPATA8Q6RVD6 105 aa6.9□□□□□ -1.3
CDH3-202ENST00000429102 A0A0D9SG42 100 aa6.87□□□□□ -1.31
CDH3-202ENST00000429102 H3BS24 57 aa6.87□□□□□ -1.31
CDH3-202ENST00000429102 Q6ZSA8 131 aa6.83□□□□□ -1.32
CDH3-202ENST00000429102 MYCBP2O75592 4640 aa6.82□□□□□ -1.32
CDH3-202ENST00000429102 A0A1B0GU33 70 aa6.81□□□□□ -1.32
CDH3-202ENST00000429102 K7ERS5 55 aa6.79□□□□□ -1.32
CDH3-202ENST00000429102 PKD1P98161 4303 aa6.78□□□□□ -1.32
CDH3-202ENST00000429102 H0YAA0 97 aa6.76□□□□□ -1.33
CDH3-202ENST00000429102 DYNC1H1Q14204 4646 aaKnown RBP6.74□□□□□ -1.33
CDH3-202ENST00000429102 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
CDH3-202ENST00000429102 LRP1Q07954 4544 aaKnown RBP6.7□□□□□ -1.34
CDH3-202ENST00000429102 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
CDH3-202ENST00000429102 H1FX-AS1Q4G0G2 97 aa6.65□□□□□ -1.34
CDH3-202ENST00000429102 SACSQ9NZJ4 4579 aa6.64□□□□□ -1.35
CDH3-202ENST00000429102 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
CDH3-202ENST00000429102 A8MUU9 505 aa6.59□□□□□ -1.35
CDH3-202ENST00000429102 COX6B2Q6YFQ2 88 aa6.59□□□□□ -1.35
CDH3-202ENST00000429102 APOBP04114 4563 aaKnown RBP6.58□□□□□ -1.36
CDH3-202ENST00000429102 C20orf166-AS1Q96NR2 134 aa6.58□□□□□ -1.36
CDH3-202ENST00000429102 FAT3Q8TDW7 4589 aa6.57□□□□□ -1.36
CDH3-202ENST00000429102 C10orf95Q9H7T3 257 aa6.55□□□□□ -1.36
CDH3-202ENST00000429102 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms