RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 KMT2CQ8NEZ4 4911 aaKnown RBP5.34□□□□□ -1.55
CDH13-202ENST00000428848 SPINK7P58062 85 aa5.34□□□□□ -1.55
CDH13-202ENST00000428848 Q6ZRN7 208 aaPredicted RBP5.34□□□□□ -1.55
CDH13-202ENST00000428848 WWC2-AS2Q96NR7 200 aa5.34□□□□□ -1.55
CDH13-202ENST00000428848 TENM2Q9NT68 2774 aa5.33□□□□□ -1.56
CDH13-202ENST00000428848 DNAH7Q8WXX0 4024 aa5.33□□□□□ -1.56
CDH13-202ENST00000428848 Q6ZR54 194 aa5.32□□□□□ -1.56
CDH13-202ENST00000428848 LINC00483Q53H64 154 aa5.32□□□□□ -1.56
CDH13-202ENST00000428848 PCOTHQ58A44 107 aa5.32□□□□□ -1.56
CDH13-202ENST00000428848 A0A087WTM6 91 aa5.31□□□□□ -1.56
CDH13-202ENST00000428848 HRES1P13985 223 aa5.31□□□□□ -1.56
CDH13-202ENST00000428848 SPACA4Q8TDM5 124 aa5.3□□□□□ -1.56
CDH13-202ENST00000428848 C8orf17Q9NRJ1 99 aa5.29□□□□□ -1.56
CDH13-202ENST00000428848 DNAH8Q96JB1 4490 aa5.29□□□□□ -1.56
CDH13-202ENST00000428848 VPS13DQ5THJ4 4388 aa5.29□□□□□ -1.56
CDH13-202ENST00000428848 CSMD3Q7Z407 3707 aa5.29□□□□□ -1.56
CDH13-202ENST00000428848 RYR3Q15413 4870 aa5.29□□□□□ -1.56
CDH13-202ENST00000428848 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
CDH13-202ENST00000428848 ZNF706Q9Y5V0 76 aaPredicted RBP5.29□□□□□ -1.56
CDH13-202ENST00000428848 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.29□□□□□ -1.56
CDH13-202ENST00000428848 C1orf134Q5TEV5 83 aa5.28□□□□□ -1.56
CDH13-202ENST00000428848 IGLV9-49A0A0B4J1Y8 123 aa5.28□□□□□ -1.56
CDH13-202ENST00000428848 RTL8CO15255 209 aa5.27□□□□□ -1.57
CDH13-202ENST00000428848 RETNLBQ9BQ08 111 aa5.27□□□□□ -1.57
CDH13-202ENST00000428848 DNAH17Q9UFH2 4485 aa5.27□□□□□ -1.57
CDH13-202ENST00000428848 A0A1B0GVX0 72 aa5.26□□□□□ -1.57
CDH13-202ENST00000428848 HECTD4Q9Y4D8 3996 aa5.25□□□□□ -1.57
CDH13-202ENST00000428848 IGLV5-52A0A0A0MRZ9 124 aa5.25□□□□□ -1.57
CDH13-202ENST00000428848 MRPL34Q9BQ48 92 aaKnown RBP5.24□□□□□ -1.57
CDH13-202ENST00000428848 IGHV6-1A0A0B4J1U7 121 aa5.23□□□□□ -1.57
CDH13-202ENST00000428848 LY6G6CO95867 125 aa5.22□□□□□ -1.57
CDH13-202ENST00000428848 NOTCH2NLQ7Z3S9 236 aa5.22□□□□□ -1.57
CDH13-202ENST00000428848 PSORS1C2Q9UIG4 136 aa5.22□□□□□ -1.57
CDH13-202ENST00000428848 FRAS1Q86XX4 4008 aa5.21□□□□□ -1.58
CDH13-202ENST00000428848 STARD9Q9P2P6 4700 aa5.21□□□□□ -1.58
CDH13-202ENST00000428848 ZNF861PO60384 105 aa5.21□□□□□ -1.58
CDH13-202ENST00000428848 KRTAP13-3Q3SY46 172 aa5.2□□□□□ -1.58
CDH13-202ENST00000428848 ANAPC11Q9NYG5 84 aa5.19□□□□□ -1.58
CDH13-202ENST00000428848 CDK2AP2O75956 126 aa5.19□□□□□ -1.58
CDH13-202ENST00000428848 ACYP2P14621 99 aa5.19□□□□□ -1.58
CDH13-202ENST00000428848 SPATA8Q6RVD6 105 aa5.19□□□□□ -1.58
CDH13-202ENST00000428848 ADM2Q7Z4H4 148 aa5.19□□□□□ -1.58
CDH13-202ENST00000428848 ALMS1Q8TCU4 4167 aa5.18□□□□□ -1.58
CDH13-202ENST00000428848 DNAH2Q9P225 4427 aa5.18□□□□□ -1.58
CDH13-202ENST00000428848 RYR2Q92736 4967 aa5.18□□□□□ -1.58
CDH13-202ENST00000428848 Q5W150 140 aa5.17□□□□□ -1.58
CDH13-202ENST00000428848 A0A1B0GU69 56 aa5.15□□□□□ -1.59
CDH13-202ENST00000428848 KMT2AQ03164 3969 aa5.14□□□□□ -1.59
CDH13-202ENST00000428848 DMAC1Q96GE9 116 aa5.14□□□□□ -1.59
CDH13-202ENST00000428848 SACSQ9NZJ4 4579 aa5.14□□□□□ -1.59
CDH13-202ENST00000428848 IGLV7-43P04211 117 aa5.14□□□□□ -1.59
CDH13-202ENST00000428848 CSAG1Q6PB30 78 aa5.12□□□□□ -1.59
CDH13-202ENST00000428848 DNAH6Q9C0G6 4158 aa5.12□□□□□ -1.59
CDH13-202ENST00000428848 DNAH11Q96DT5 4516 aa5.12□□□□□ -1.59
CDH13-202ENST00000428848 EPPK1P58107 5090 aaKnown RBP5.12□□□□□ -1.59
CDH13-202ENST00000428848 MIR22HGQ0VDD5 57 aa5.12□□□□□ -1.59
CDH13-202ENST00000428848 UQCR11O14957 56 aa5.11□□□□□ -1.59
CDH13-202ENST00000428848 SPINK6Q6UWN8 80 aa5.11□□□□□ -1.59
CDH13-202ENST00000428848 SSBP3-AS1Q7Z2R9 100 aa5.11□□□□□ -1.59
CDH13-202ENST00000428848 HYDINQ4G0P3 5121 aa5.11□□□□□ -1.59
CDH13-202ENST00000428848 ROMO1P60602 79 aa5.1□□□□□ -1.59
CDH13-202ENST00000428848 A0A0A0MQY5 61 aa5.09□□□□□ -1.59
CDH13-202ENST00000428848 DNAH5Q8TE73 4624 aa5.09□□□□□ -1.59
CDH13-202ENST00000428848 CIRBP-AS1Q8TBR5 109 aa5.09□□□□□ -1.59
CDH13-202ENST00000428848 BIRC6Q9NR09 4857 aa5.07□□□□□ -1.6
CDH13-202ENST00000428848 Q6ZSA8 131 aa5.06□□□□□ -1.6
CDH13-202ENST00000428848 KRTAP10-2P60368 255 aa5.06□□□□□ -1.6
CDH13-202ENST00000428848 FAM229AH3BQW9 127 aa5.05□□□□□ -1.6
CDH13-202ENST00000428848 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
CDH13-202ENST00000428848 KRTAP16-1A8MUX0 517 aa5.04□□□□□ -1.6
CDH13-202ENST00000428848 KRTAP13-2Q52LG2 175 aa5.03□□□□□ -1.6
CDH13-202ENST00000428848 KRTAP10-1P60331 282 aa5.01□□□□□ -1.61
CDH13-202ENST00000428848 LRP1BQ9NZR2 4599 aa5□□□□□ -1.61
CDH13-202ENST00000428848 J3QL48 77 aa5□□□□□ -1.61
CDH13-202ENST00000428848 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
CDH13-202ENST00000428848 KRTAP1-4P0C5Y4 121 aa4.97□□□□□ -1.61
CDH13-202ENST00000428848 PKD1P98161 4303 aa4.96□□□□□ -1.62
CDH13-202ENST00000428848 FAT2Q9NYQ8 4349 aa4.93□□□□□ -1.62
CDH13-202ENST00000428848 VPS13BQ7Z7G8 4022 aa4.93□□□□□ -1.62
CDH13-202ENST00000428848 SPINK1P00995 79 aa4.92□□□□□ -1.62
CDH13-202ENST00000428848 TYMSOSQ8TAI1 123 aa4.92□□□□□ -1.62
CDH13-202ENST00000428848 IGKV2D-30A0A075B6S6 120 aa4.92□□□□□ -1.62
CDH13-202ENST00000428848 KRTAP17-1Q9BYP8 105 aa4.91□□□□□ -1.62
CDH13-202ENST00000428848 A8MUU9 505 aa4.91□□□□□ -1.62
CDH13-202ENST00000428848 RPS29P62273 56 aaKnown RBP4.9□□□□□ -1.62
CDH13-202ENST00000428848 HERC2O95714 4834 aa4.88□□□□□ -1.63
CDH13-202ENST00000428848 P0C880 135 aa4.88□□□□□ -1.63
CDH13-202ENST00000428848 KIAA1109Q2LD37 5005 aa4.88□□□□□ -1.63
CDH13-202ENST00000428848 A0A1B0GVY2 172 aa4.87□□□□□ -1.63
CDH13-202ENST00000428848 LINC00304Q8N9R0 145 aa4.86□□□□□ -1.63
CDH13-202ENST00000428848 PCLOQ9Y6V0 5065 aa4.85□□□□□ -1.63
CDH13-202ENST00000428848 H0YAA0 97 aa4.84□□□□□ -1.64
CDH13-202ENST00000428848 PKHD1P08F94 4074 aa4.82□□□□□ -1.64
CDH13-202ENST00000428848 Q8N1X5 172 aa4.81□□□□□ -1.64
CDH13-202ENST00000428848 PKHD1L1Q86WI1 4243 aa4.8□□□□□ -1.64
CDH13-202ENST00000428848 SMR3BP02814 79 aaPredicted RBP4.8□□□□□ -1.64
CDH13-202ENST00000428848 C20orf166-AS1Q96NR2 134 aa4.79□□□□□ -1.64
CDH13-202ENST00000428848 A0A1B0GU33 70 aa4.77□□□□□ -1.65
CDH13-202ENST00000428848 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
CDH13-202ENST00000428848 RYR1P21817 5038 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms