RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PRB2P02812 416 aaPredicted RBP3.06□□□□□ -1.92
RIF1-203ENST00000428287 CASC10Q5T4H9 136 aa3.05□□□□□ -1.92
RIF1-203ENST00000428287 LINC00483Q53H64 154 aa3.05□□□□□ -1.92
RIF1-203ENST00000428287 ACYP2P14621 99 aa3.05□□□□□ -1.92
RIF1-203ENST00000428287 IGHV6-1A0A0B4J1U7 121 aa3.04□□□□□ -1.92
RIF1-203ENST00000428287 UQCR11O14957 56 aa3.04□□□□□ -1.92
RIF1-203ENST00000428287 Q5W150 140 aa3.04□□□□□ -1.92
RIF1-203ENST00000428287 PCOTHQ58A44 107 aa3.03□□□□□ -1.92
RIF1-203ENST00000428287 ADM2Q7Z4H4 148 aa3.03□□□□□ -1.92
RIF1-203ENST00000428287 DNAH1Q9P2D7 4330 aa3.02□□□□□ -1.93
RIF1-203ENST00000428287 NOTCH2NLQ7Z3S9 236 aa3.02□□□□□ -1.93
RIF1-203ENST00000428287 KRTAP1-5Q9BYS1 174 aa3.01□□□□□ -1.93
RIF1-203ENST00000428287 K7EIL1 84 aa3□□□□□ -1.93
RIF1-203ENST00000428287 PRAC1Q96KF2 57 aa3□□□□□ -1.93
RIF1-203ENST00000428287 PKHD1P08F94 4074 aa3□□□□□ -1.93
RIF1-203ENST00000428287 IGLV7-43P04211 117 aa3□□□□□ -1.93
RIF1-203ENST00000428287 C14orf177Q52M58 125 aa2.99□□□□□ -1.93
RIF1-203ENST00000428287 RETNLBQ9BQ08 111 aa2.99□□□□□ -1.93
RIF1-203ENST00000428287 FAM229AH3BQW9 127 aa2.99□□□□□ -1.93
RIF1-203ENST00000428287 H3BS24 57 aa2.98□□□□□ -1.93
RIF1-203ENST00000428287 A0A1B0GU69 56 aa2.98□□□□□ -1.93
RIF1-203ENST00000428287 ZNF861PO60384 105 aa2.98□□□□□ -1.93
RIF1-203ENST00000428287 MIR22HGQ0VDD5 57 aa2.98□□□□□ -1.93
RIF1-203ENST00000428287 ROMO1P60602 79 aa2.97□□□□□ -1.93
RIF1-203ENST00000428287 IGKV2-30P06310 120 aa2.96□□□□□ -1.93
RIF1-203ENST00000428287 OXLD1Q5BKU9 147 aa2.96□□□□□ -1.94
RIF1-203ENST00000428287 DNAH8Q96JB1 4490 aa2.96□□□□□ -1.94
RIF1-203ENST00000428287 CSAG1Q6PB30 78 aa2.95□□□□□ -1.94
RIF1-203ENST00000428287 DNAH2Q9P225 4427 aa2.95□□□□□ -1.94
RIF1-203ENST00000428287 KRTAP10-11P60412 298 aa2.95□□□□□ -1.94
RIF1-203ENST00000428287 Q6ZRN7 208 aaPredicted RBP2.95□□□□□ -1.94
RIF1-203ENST00000428287 SPACA4Q8TDM5 124 aa2.95□□□□□ -1.94
RIF1-203ENST00000428287 SSBP3-AS1Q7Z2R9 100 aa2.95□□□□□ -1.94
RIF1-203ENST00000428287 LY6G6CO95867 125 aa2.94□□□□□ -1.94
RIF1-203ENST00000428287 A8MUU9 505 aa2.94□□□□□ -1.94
RIF1-203ENST00000428287 INAFM1C9JVW0 142 aa2.94□□□□□ -1.94
RIF1-203ENST00000428287 PANO1I0J062 215 aa2.94□□□□□ -1.94
RIF1-203ENST00000428287 SMR3AQ99954 134 aa2.93□□□□□ -1.94
RIF1-203ENST00000428287 PLECQ15149 4684 aaKnown RBP2.92□□□□□ -1.94
RIF1-203ENST00000428287 KRTAP16-1A8MUX0 517 aa2.92□□□□□ -1.94
RIF1-203ENST00000428287 ZNF706Q9Y5V0 76 aaPredicted RBP2.92□□□□□ -1.94
RIF1-203ENST00000428287 FAT2Q9NYQ8 4349 aa2.92□□□□□ -1.94
RIF1-203ENST00000428287 IGLV5-52A0A0A0MRZ9 124 aa2.91□□□□□ -1.94
RIF1-203ENST00000428287 PSORS1C2Q9UIG4 136 aa2.91□□□□□ -1.94
RIF1-203ENST00000428287 CDK2AP2O75956 126 aa2.91□□□□□ -1.94
RIF1-203ENST00000428287 VPS13DQ5THJ4 4388 aa2.91□□□□□ -1.94
RIF1-203ENST00000428287 DYNC2H1Q8NCM8 4307 aaKnown RBP2.91□□□□□ -1.94
RIF1-203ENST00000428287 Q6ZSA8 131 aa2.9□□□□□ -1.94
RIF1-203ENST00000428287 DNAH17Q9UFH2 4485 aa2.9□□□□□ -1.94
RIF1-203ENST00000428287 C1orf134Q5TEV5 83 aa2.9□□□□□ -1.94
RIF1-203ENST00000428287 IGKV2D-30A0A075B6S6 120 aa2.9□□□□□ -1.94
RIF1-203ENST00000428287 H0YAA0 97 aa2.9□□□□□ -1.94
RIF1-203ENST00000428287 DNHD1Q96M86 4753 aa2.89□□□□□ -1.95
RIF1-203ENST00000428287 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.89□□□□□ -1.95
RIF1-203ENST00000428287 STARD9Q9P2P6 4700 aa2.89□□□□□ -1.95
RIF1-203ENST00000428287 IGLV9-49A0A0B4J1Y8 123 aa2.89□□□□□ -1.95
RIF1-203ENST00000428287 DNAH11Q96DT5 4516 aa2.88□□□□□ -1.95
RIF1-203ENST00000428287 KRTAP25-1Q3LHN0 102 aa2.88□□□□□ -1.95
RIF1-203ENST00000428287 ANAPC11Q9NYG5 84 aa2.88□□□□□ -1.95
RIF1-203ENST00000428287 LINC00304Q8N9R0 145 aa2.87□□□□□ -1.95
RIF1-203ENST00000428287 APLNQ9ULZ1 77 aa2.85□□□□□ -1.95
RIF1-203ENST00000428287 NBDYA0A0U1RRE5 68 aa2.84□□□□□ -1.95
RIF1-203ENST00000428287 SPINK6Q6UWN8 80 aa2.84□□□□□ -1.95
RIF1-203ENST00000428287 P0C880 135 aa2.83□□□□□ -1.96
RIF1-203ENST00000428287 A0A087WTM6 91 aa2.82□□□□□ -1.96
RIF1-203ENST00000428287 COX6B2Q6YFQ2 88 aa2.82□□□□□ -1.96
RIF1-203ENST00000428287 A0A1B0GU33 70 aa2.81□□□□□ -1.96
RIF1-203ENST00000428287 PKD1P98161 4303 aa2.81□□□□□ -1.96
RIF1-203ENST00000428287 KRTAP13-2Q52LG2 175 aa2.8□□□□□ -1.96
RIF1-203ENST00000428287 LRP1BQ9NZR2 4599 aa2.8□□□□□ -1.96
RIF1-203ENST00000428287 CIRBP-AS1Q8TBR5 109 aa2.8□□□□□ -1.96
RIF1-203ENST00000428287 HSPG2P98160 4391 aa2.79□□□□□ -1.96
RIF1-203ENST00000428287 TYMSOSQ8TAI1 123 aa2.79□□□□□ -1.96
RIF1-203ENST00000428287 KRTAP3-1Q9BYR8 98 aa2.78□□□□□ -1.96
RIF1-203ENST00000428287 KRTAP24-1Q3LI83 254 aa2.78□□□□□ -1.96
RIF1-203ENST00000428287 KRTAP1-4P0C5Y4 121 aa2.78□□□□□ -1.96
RIF1-203ENST00000428287 RPS29P62273 56 aaKnown RBP2.78□□□□□ -1.97
RIF1-203ENST00000428287 J3QKU1 62 aa2.77□□□□□ -1.97
RIF1-203ENST00000428287 SPINK1P00995 79 aa2.77□□□□□ -1.97
RIF1-203ENST00000428287 MYCBP2O75592 4640 aa2.77□□□□□ -1.97
RIF1-203ENST00000428287 C20orf166-AS1Q96NR2 134 aa2.77□□□□□ -1.97
RIF1-203ENST00000428287 H1FX-AS1Q4G0G2 97 aa2.76□□□□□ -1.97
RIF1-203ENST00000428287 KRTAP10-6P60371 365 aaPredicted RBP2.74□□□□□ -1.97
RIF1-203ENST00000428287 LRP1Q07954 4544 aaKnown RBP2.74□□□□□ -1.97
RIF1-203ENST00000428287 K7ERS5 55 aa2.73□□□□□ -1.97
RIF1-203ENST00000428287 NUPR2A6NF83 97 aa2.73□□□□□ -1.97
RIF1-203ENST00000428287 UBE2DNLQ8IWF7 75 aa2.73□□□□□ -1.97
RIF1-203ENST00000428287 DNAH5Q8TE73 4624 aa2.72□□□□□ -1.97
RIF1-203ENST00000428287 RPL37P61927 97 aaKnown RBP2.72□□□□□ -1.97
RIF1-203ENST00000428287 Q8N1X5 172 aa2.72□□□□□ -1.97
RIF1-203ENST00000428287 KRTAP15-1Q3LI76 137 aa2.72□□□□□ -1.97
RIF1-203ENST00000428287 KRTAP3-2Q9BYR7 98 aa2.69□□□□□ -1.98
RIF1-203ENST00000428287 TPRXLQ17RH7 258 aa2.69□□□□□ -1.98
RIF1-203ENST00000428287 KRTAP3-3Q9BYR6 98 aa2.69□□□□□ -1.98
RIF1-203ENST00000428287 FAT3Q8TDW7 4589 aa2.67□□□□□ -1.98
RIF1-203ENST00000428287 DYNC1H1Q14204 4646 aaKnown RBP2.66□□□□□ -1.98
RIF1-203ENST00000428287 XP32Q5T750 250 aa2.66□□□□□ -1.98
RIF1-203ENST00000428287 KRTAP13-4Q3LI77 160 aa2.65□□□□□ -1.98
RIF1-203ENST00000428287 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
RIF1-203ENST00000428287 FAT1Q14517 4588 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms