RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 TP53AIP1Q9HCN2 124 aa6.56□□□□□ -1.36
TCOF1-204ENST00000427724 IGLV5-37A0A075B6J1 123 aa6.55□□□□□ -1.36
TCOF1-204ENST00000427724 IGLV8-61A0A075B6I0 122 aa6.54□□□□□ -1.36
TCOF1-204ENST00000427724 LCA10Q71F78 164 aa6.54□□□□□ -1.36
TCOF1-204ENST00000427724 CDC42SE1Q9NRR8 79 aa6.54□□□□□ -1.36
TCOF1-204ENST00000427724 Q6ZSA8 131 aa6.53□□□□□ -1.36
TCOF1-204ENST00000427724 SPANXA2-OT1Q8N9U9 137 aa6.53□□□□□ -1.36
TCOF1-204ENST00000427724 C8orf87E5RJ46 101 aa6.53□□□□□ -1.36
TCOF1-204ENST00000427724 PANO1I0J062 215 aa6.52□□□□□ -1.37
TCOF1-204ENST00000427724 ANK3Q12955 4377 aaKnown RBP6.52□□□□□ -1.37
TCOF1-204ENST00000427724 SPRR1AP35321 89 aa6.52□□□□□ -1.37
TCOF1-204ENST00000427724 ACYP2P14621 99 aa6.51□□□□□ -1.37
TCOF1-204ENST00000427724 A8MU10 97 aa6.51□□□□□ -1.37
TCOF1-204ENST00000427724 PRAC1Q96KF2 57 aa6.48□□□□□ -1.37
TCOF1-204ENST00000427724 Q75L30 129 aa6.47□□□□□ -1.37
TCOF1-204ENST00000427724 C8orf17Q9NRJ1 99 aa6.47□□□□□ -1.37
TCOF1-204ENST00000427724 MRPL34Q9BQ48 92 aaKnown RBP6.47□□□□□ -1.37
TCOF1-204ENST00000427724 K7ERS5 55 aa6.45□□□□□ -1.38
TCOF1-204ENST00000427724 Q6ZRN7 208 aaPredicted RBP6.44□□□□□ -1.38
TCOF1-204ENST00000427724 KRTAP4-16G5E9R7 235 aaPredicted RBP6.44□□□□□ -1.38
TCOF1-204ENST00000427724 A0A1B0GVX0 72 aa6.44□□□□□ -1.38
TCOF1-204ENST00000427724 Q8N1X5 172 aa6.43□□□□□ -1.38
TCOF1-204ENST00000427724 SPINK7P58062 85 aa6.42□□□□□ -1.38
TCOF1-204ENST00000427724 ZCCHC13Q8WW36 166 aaKnown RBP6.42□□□□□ -1.38
TCOF1-204ENST00000427724 UQCR11O14957 56 aa6.41□□□□□ -1.38
TCOF1-204ENST00000427724 MIR22HGQ0VDD5 57 aa6.4□□□□□ -1.38
TCOF1-204ENST00000427724 SEC61BP60468 96 aaKnown RBP6.38□□□□□ -1.39
TCOF1-204ENST00000427724 KRTAP7-1Q8IUC3 87 aa6.38□□□□□ -1.39
TCOF1-204ENST00000427724 LINC01558Q9Y6Z2 57 aa6.38□□□□□ -1.39
TCOF1-204ENST00000427724 DNHD1Q96M86 4753 aa6.38□□□□□ -1.39
TCOF1-204ENST00000427724 LINC01554Q52M75 96 aa6.35□□□□□ -1.39
TCOF1-204ENST00000427724 MMP24-AS1A0A0U1RRL7 71 aa6.35□□□□□ -1.39
TCOF1-204ENST00000427724 LINC00472Q9H8W2 130 aa6.35□□□□□ -1.39
TCOF1-204ENST00000427724 FBN3Q75N90 2809 aa6.35□□□□□ -1.39
TCOF1-204ENST00000427724 HRES1P13985 223 aa6.35□□□□□ -1.39
TCOF1-204ENST00000427724 SPRR1BP22528 89 aa6.31□□□□□ -1.4
TCOF1-204ENST00000427724 KRTAP11-1Q8IUC1 163 aa6.31□□□□□ -1.4
TCOF1-204ENST00000427724 A0A087X002 238 aa6.31□□□□□ -1.4
TCOF1-204ENST00000427724 KRTAP29-1A8MX34 341 aaPredicted RBP6.29□□□□□ -1.4
TCOF1-204ENST00000427724 A6NN06 94 aa6.28□□□□□ -1.4
TCOF1-204ENST00000427724 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
TCOF1-204ENST00000427724 A0A0A0MQY5 61 aa6.24□□□□□ -1.41
TCOF1-204ENST00000427724 ADM2Q7Z4H4 148 aa6.23□□□□□ -1.41
TCOF1-204ENST00000427724 COL7A1Q02388 2944 aa6.23□□□□□ -1.41
TCOF1-204ENST00000427724 SPINT4Q6UDR6 99 aa6.2□□□□□ -1.42
TCOF1-204ENST00000427724 MEGF8Q7Z7M0 2845 aa6.19□□□□□ -1.42
TCOF1-204ENST00000427724 NOTCH2NLQ7Z3S9 236 aa6.17□□□□□ -1.42
TCOF1-204ENST00000427724 CSMD3Q7Z407 3707 aa6.17□□□□□ -1.42
TCOF1-204ENST00000427724 LINC00483Q53H64 154 aa6.13□□□□□ -1.43
TCOF1-204ENST00000427724 CRIPTQ9P021 101 aa6.12□□□□□ -1.43
TCOF1-204ENST00000427724 Q5W150 140 aa6.11□□□□□ -1.43
TCOF1-204ENST00000427724 ANK2Q01484 3957 aa6.09□□□□□ -1.43
TCOF1-204ENST00000427724 KRTAP13-2Q52LG2 175 aa6.09□□□□□ -1.43
TCOF1-204ENST00000427724 KRTAP13-1Q8IUC0 172 aa6.09□□□□□ -1.43
TCOF1-204ENST00000427724 DMAC1Q96GE9 116 aa6.05□□□□□ -1.44
TCOF1-204ENST00000427724 SPATA8Q6RVD6 105 aa6.03□□□□□ -1.44
TCOF1-204ENST00000427724 A0A1B0GU33 70 aa6.02□□□□□ -1.45
TCOF1-204ENST00000427724 A0A0D9SG42 100 aa6.02□□□□□ -1.45
TCOF1-204ENST00000427724 A0A1B0GVY2 172 aa6.02□□□□□ -1.45
TCOF1-204ENST00000427724 PRKDCP78527 4128 aaKnown RBP5.98□□□□□ -1.45
TCOF1-204ENST00000427724 ASB16-AS1Q495Z4 193 aa5.97□□□□□ -1.45
TCOF1-204ENST00000427724 S4R3F8 94 aa5.96□□□□□ -1.45
TCOF1-204ENST00000427724 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.46
TCOF1-204ENST00000427724 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
TCOF1-204ENST00000427724 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
TCOF1-204ENST00000427724 R4GN34 69 aa5.91□□□□□ -1.46
TCOF1-204ENST00000427724 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
TCOF1-204ENST00000427724 RPL37P61927 97 aaKnown RBP5.87□□□□□ -1.47
TCOF1-204ENST00000427724 KRTAP25-1Q3LHN0 102 aa5.87□□□□□ -1.47
TCOF1-204ENST00000427724 LYSTQ99698 3801 aa5.87□□□□□ -1.47
TCOF1-204ENST00000427724 ROMO1P60602 79 aa5.83□□□□□ -1.48
TCOF1-204ENST00000427724 CMYA5Q8N3K9 4069 aa5.82□□□□□ -1.48
TCOF1-204ENST00000427724 HUWE1Q7Z6Z7 4374 aaKnown RBP5.82□□□□□ -1.48
TCOF1-204ENST00000427724 H1FX-AS1Q4G0G2 97 aa5.81□□□□□ -1.48
TCOF1-204ENST00000427724 XP32Q5T750 250 aa5.79□□□□□ -1.48
TCOF1-204ENST00000427724 M0QZ58 72 aa5.77□□□□□ -1.49
TCOF1-204ENST00000427724 KRTAP10-8P60410 259 aa5.77□□□□□ -1.49
TCOF1-204ENST00000427724 DNAH9Q9NYC9 4486 aa5.77□□□□□ -1.49
TCOF1-204ENST00000427724 TPRXLQ17RH7 258 aa5.77□□□□□ -1.49
TCOF1-204ENST00000427724 A8MUU9 505 aa5.75□□□□□ -1.49
TCOF1-204ENST00000427724 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
TCOF1-204ENST00000427724 NDUFAF8A1L188 74 aa5.73□□□□□ -1.49
TCOF1-204ENST00000427724 STARD9Q9P2P6 4700 aa5.73□□□□□ -1.49
TCOF1-204ENST00000427724 PLECQ15149 4684 aaKnown RBP5.72□□□□□ -1.49
TCOF1-204ENST00000427724 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.49
TCOF1-204ENST00000427724 KRTAP13-3Q3SY46 172 aa5.69□□□□□ -1.5
TCOF1-204ENST00000427724 KRTAP16-1A8MUX0 517 aa5.68□□□□□ -1.5
TCOF1-204ENST00000427724 KMT2CQ8NEZ4 4911 aaKnown RBP5.67□□□□□ -1.5
TCOF1-204ENST00000427724 DNAH10Q8IVF4 4471 aa5.67□□□□□ -1.5
TCOF1-204ENST00000427724 H0YAA0 97 aa5.67□□□□□ -1.5
TCOF1-204ENST00000427724 KMT2AQ03164 3969 aa5.66□□□□□ -1.5
TCOF1-204ENST00000427724 DNAH7Q8WXX0 4024 aa5.66□□□□□ -1.5
TCOF1-204ENST00000427724 KRTAP10-10P60014 251 aa5.63□□□□□ -1.51
TCOF1-204ENST00000427724 LUZP6Q538Z0 58 aa5.61□□□□□ -1.51
TCOF1-204ENST00000427724 HYDINQ4G0P3 5121 aa5.6□□□□□ -1.51
TCOF1-204ENST00000427724 C10orf95Q9H7T3 257 aa5.59□□□□□ -1.51
TCOF1-204ENST00000427724 DNAH3Q8TD57 4116 aa5.54□□□□□ -1.52
TCOF1-204ENST00000427724 FRAS1Q86XX4 4008 aa5.53□□□□□ -1.52
TCOF1-204ENST00000427724 MT1HL1P0DM35 61 aa5.5□□□□□ -1.53
TCOF1-204ENST00000427724 RYR3Q15413 4870 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms