RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 DNAH1Q9P2D7 4330 aa6.81□□□□□ -1.32
SEC61A1-202ENST00000424880 Q5W150 140 aa6.81□□□□□ -1.32
SEC61A1-202ENST00000424880 Q96NJ1 140 aa6.81□□□□□ -1.32
SEC61A1-202ENST00000424880 FBN3Q75N90 2809 aa6.81□□□□□ -1.32
SEC61A1-202ENST00000424880 KRTAP1-5Q9BYS1 174 aa6.8□□□□□ -1.32
SEC61A1-202ENST00000424880 PANO1I0J062 215 aa6.78□□□□□ -1.32
SEC61A1-202ENST00000424880 SPRR1BP22528 89 aa6.78□□□□□ -1.32
SEC61A1-202ENST00000424880 DNAH7Q8WXX0 4024 aa6.76□□□□□ -1.33
SEC61A1-202ENST00000424880 FLG2Q5D862 2391 aaPredicted RBP6.76□□□□□ -1.33
SEC61A1-202ENST00000424880 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
SEC61A1-202ENST00000424880 CDK2AP2O75956 126 aa6.75□□□□□ -1.33
SEC61A1-202ENST00000424880 CSAG1Q6PB30 78 aa6.75□□□□□ -1.33
SEC61A1-202ENST00000424880 MRPL34Q9BQ48 92 aaKnown RBP6.74□□□□□ -1.33
SEC61A1-202ENST00000424880 ALMS1Q8TCU4 4167 aa6.74□□□□□ -1.33
SEC61A1-202ENST00000424880 A0A1B0GVX0 72 aa6.73□□□□□ -1.33
SEC61A1-202ENST00000424880 A0A1B0GU69 56 aa6.73□□□□□ -1.33
SEC61A1-202ENST00000424880 MEGF8Q7Z7M0 2845 aa6.71□□□□□ -1.34
SEC61A1-202ENST00000424880 TGP01266 2768 aa6.69□□□□□ -1.34
SEC61A1-202ENST00000424880 ACYP2P14621 99 aa6.67□□□□□ -1.34
SEC61A1-202ENST00000424880 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
SEC61A1-202ENST00000424880 PRKDCP78527 4128 aaKnown RBP6.65□□□□□ -1.35
SEC61A1-202ENST00000424880 SPINK1P00995 79 aa6.63□□□□□ -1.35
SEC61A1-202ENST00000424880 KRTAP13-3Q3SY46 172 aa6.63□□□□□ -1.35
SEC61A1-202ENST00000424880 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.63□□□□□ -1.35
SEC61A1-202ENST00000424880 CIRBP-AS1Q8TBR5 109 aa6.61□□□□□ -1.35
SEC61A1-202ENST00000424880 UBE2DNLQ8IWF7 75 aa6.61□□□□□ -1.35
SEC61A1-202ENST00000424880 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
SEC61A1-202ENST00000424880 UQCR11O14957 56 aa6.61□□□□□ -1.35
SEC61A1-202ENST00000424880 PLECQ15149 4684 aaKnown RBP6.6□□□□□ -1.35
SEC61A1-202ENST00000424880 DNAH8Q96JB1 4490 aa6.59□□□□□ -1.35
SEC61A1-202ENST00000424880 KRTAP13-1Q8IUC0 172 aa6.59□□□□□ -1.35
SEC61A1-202ENST00000424880 WWC2-AS2Q96NR7 200 aa6.59□□□□□ -1.36
SEC61A1-202ENST00000424880 CRIPTQ9P021 101 aa6.59□□□□□ -1.36
SEC61A1-202ENST00000424880 DYNC2H1Q8NCM8 4307 aaKnown RBP6.58□□□□□ -1.36
SEC61A1-202ENST00000424880 ZNF861PO60384 105 aa6.57□□□□□ -1.36
SEC61A1-202ENST00000424880 IGKV2D-30A0A075B6S6 120 aa6.56□□□□□ -1.36
SEC61A1-202ENST00000424880 IGKV2-30P06310 120 aa6.56□□□□□ -1.36
SEC61A1-202ENST00000424880 STARD9Q9P2P6 4700 aa6.56□□□□□ -1.36
SEC61A1-202ENST00000424880 DNAH17Q9UFH2 4485 aa6.55□□□□□ -1.36
SEC61A1-202ENST00000424880 C1orf134Q5TEV5 83 aa6.55□□□□□ -1.36
SEC61A1-202ENST00000424880 APLNQ9ULZ1 77 aa6.54□□□□□ -1.36
SEC61A1-202ENST00000424880 PSORS1C2Q9UIG4 136 aa6.54□□□□□ -1.36
SEC61A1-202ENST00000424880 LINC00483Q53H64 154 aa6.51□□□□□ -1.37
SEC61A1-202ENST00000424880 DMBT1Q9UGM3 2413 aaPredicted RBP6.5□□□□□ -1.37
SEC61A1-202ENST00000424880 ZNF706Q9Y5V0 76 aaPredicted RBP6.5□□□□□ -1.37
SEC61A1-202ENST00000424880 KMT2AQ03164 3969 aa6.49□□□□□ -1.37
SEC61A1-202ENST00000424880 ROMO1P60602 79 aa6.49□□□□□ -1.37
SEC61A1-202ENST00000424880 C14orf177Q52M58 125 aa6.49□□□□□ -1.37
SEC61A1-202ENST00000424880 Q8N1X5 172 aa6.48□□□□□ -1.37
SEC61A1-202ENST00000424880 KRTAP25-1Q3LHN0 102 aa6.46□□□□□ -1.38
SEC61A1-202ENST00000424880 VPS13DQ5THJ4 4388 aa6.46□□□□□ -1.38
SEC61A1-202ENST00000424880 IGLV7-43P04211 117 aa6.44□□□□□ -1.38
SEC61A1-202ENST00000424880 SPACA4Q8TDM5 124 aa6.44□□□□□ -1.38
SEC61A1-202ENST00000424880 IGLV5-52A0A0A0MRZ9 124 aa6.42□□□□□ -1.38
SEC61A1-202ENST00000424880 FAM229AH3BQW9 127 aa6.42□□□□□ -1.38
SEC61A1-202ENST00000424880 NUPR2A6NF83 97 aa6.41□□□□□ -1.38
SEC61A1-202ENST00000424880 DNAH2Q9P225 4427 aa6.41□□□□□ -1.38
SEC61A1-202ENST00000424880 HECTD4Q9Y4D8 3996 aa6.41□□□□□ -1.38
SEC61A1-202ENST00000424880 NBDYA0A0U1RRE5 68 aa6.4□□□□□ -1.38
SEC61A1-202ENST00000424880 A8MUU9 505 aa6.4□□□□□ -1.39
SEC61A1-202ENST00000424880 Q6ZRN7 208 aaPredicted RBP6.4□□□□□ -1.39
SEC61A1-202ENST00000424880 DNAH6Q9C0G6 4158 aa6.38□□□□□ -1.39
SEC61A1-202ENST00000424880 H0YAA0 97 aa6.38□□□□□ -1.39
SEC61A1-202ENST00000424880 LINC00304Q8N9R0 145 aa6.38□□□□□ -1.39
SEC61A1-202ENST00000424880 TYMSOSQ8TAI1 123 aa6.37□□□□□ -1.39
SEC61A1-202ENST00000424880 Q6ZSA8 131 aa6.37□□□□□ -1.39
SEC61A1-202ENST00000424880 A0A087WTM6 91 aa6.31□□□□□ -1.4
SEC61A1-202ENST00000424880 P0C880 135 aa6.31□□□□□ -1.4
SEC61A1-202ENST00000424880 SSBP3-AS1Q7Z2R9 100 aa6.31□□□□□ -1.4
SEC61A1-202ENST00000424880 LY6G6CO95867 125 aa6.3□□□□□ -1.4
SEC61A1-202ENST00000424880 KRTAP16-1A8MUX0 517 aa6.29□□□□□ -1.4
SEC61A1-202ENST00000424880 HYDINQ4G0P3 5121 aa6.28□□□□□ -1.4
SEC61A1-202ENST00000424880 KRTAP13-2Q52LG2 175 aa6.26□□□□□ -1.41
SEC61A1-202ENST00000424880 DNAH11Q96DT5 4516 aa6.25□□□□□ -1.41
SEC61A1-202ENST00000424880 A0A1B0GU33 70 aa6.24□□□□□ -1.41
SEC61A1-202ENST00000424880 LRP1BQ9NZR2 4599 aa6.23□□□□□ -1.41
SEC61A1-202ENST00000424880 DNAH5Q8TE73 4624 aa6.2□□□□□ -1.42
SEC61A1-202ENST00000424880 FAT2Q9NYQ8 4349 aa6.19□□□□□ -1.42
SEC61A1-202ENST00000424880 PKD1P98161 4303 aa6.17□□□□□ -1.42
SEC61A1-202ENST00000424880 SPINT4Q6UDR6 99 aa6.16□□□□□ -1.42
SEC61A1-202ENST00000424880 C9orf92A6NGG3 77 aa6.16□□□□□ -1.42
SEC61A1-202ENST00000424880 RYR2Q92736 4967 aa6.16□□□□□ -1.42
SEC61A1-202ENST00000424880 KRTAP10-2P60368 255 aa6.15□□□□□ -1.42
SEC61A1-202ENST00000424880 H1FX-AS1Q4G0G2 97 aa6.15□□□□□ -1.42
SEC61A1-202ENST00000424880 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.43
SEC61A1-202ENST00000424880 KMT2CQ8NEZ4 4911 aaKnown RBP6.15□□□□□ -1.43
SEC61A1-202ENST00000424880 A0A0D9SG42 100 aa6.14□□□□□ -1.43
SEC61A1-202ENST00000424880 VPS13BQ7Z7G8 4022 aa6.13□□□□□ -1.43
SEC61A1-202ENST00000424880 SACSQ9NZJ4 4579 aa6.13□□□□□ -1.43
SEC61A1-202ENST00000424880 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
SEC61A1-202ENST00000424880 NDUFAF8A1L188 74 aa6.1□□□□□ -1.43
SEC61A1-202ENST00000424880 PKHD1P08F94 4074 aa6.09□□□□□ -1.43
SEC61A1-202ENST00000424880 COX6B2Q6YFQ2 88 aa6.09□□□□□ -1.43
SEC61A1-202ENST00000424880 RYR3Q15413 4870 aa6.09□□□□□ -1.43
SEC61A1-202ENST00000424880 TPRXLQ17RH7 258 aa6.07□□□□□ -1.44
SEC61A1-202ENST00000424880 K7ERS5 55 aa6.06□□□□□ -1.44
SEC61A1-202ENST00000424880 KRTAP10-1P60331 282 aa6.05□□□□□ -1.44
SEC61A1-202ENST00000424880 KRTAP1-4P0C5Y4 121 aa6.04□□□□□ -1.44
SEC61A1-202ENST00000424880 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
SEC61A1-202ENST00000424880 C20orf166-AS1Q96NR2 134 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms