RNA–Protein interactions for RNA: ENST00000417928.1

TRGV6-201, Transcript of T cell receptor gamma variable 6 (pseudogene), humanhuman

BASIC

Gene TRGV6, Length 299 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV6-201ENST00000417928 HRNRQ86YZ3 2850 aaPredicted RBP0.68□□□□□ -2.3
TRGV6-201ENST00000417928 NDUFA1O15239 70 aa0.68□□□□□ -2.3
TRGV6-201ENST00000417928 ACANP16112 2415 aa0.67□□□□□ -2.3
TRGV6-201ENST00000417928 NCOR2Q9Y618 2525 aa0.66□□□□□ -2.3
TRGV6-201ENST00000417928 FAT4Q6V0I7 4981 aa0.66□□□□□ -2.3
TRGV6-201ENST00000417928 FLNCQ14315 2725 aa0.65□□□□□ -2.31
TRGV6-201ENST00000417928 NF1P21359 2839 aa0.65□□□□□ -2.31
TRGV6-201ENST00000417928 SRRM2Q9UQ35 2752 aaKnown RBP0.64□□□□□ -2.31
TRGV6-201ENST00000417928 NOP10Q9NPE3 64 aaKnown RBP0.63□□□□□ -2.31
TRGV6-201ENST00000417928 AHNAK2Q8IVF2 5795 aa0.62□□□□□ -2.31
TRGV6-201ENST00000417928 IGSF10Q6WRI0 2623 aa0.62□□□□□ -2.31
TRGV6-201ENST00000417928 GCC2Q8IWJ2 1684 aa0.62□□□□□ -2.31
TRGV6-201ENST00000417928 DUOX1Q9NRD9 1551 aa0.62□□□□□ -2.31
TRGV6-201ENST00000417928 A0A0C4DFX4 3053 aa0.61□□□□□ -2.31
TRGV6-201ENST00000417928 ZZEF1O43149 2961 aa0.61□□□□□ -2.31
TRGV6-201ENST00000417928 IGLV5-48A0A075B6I7 105 aa0.61□□□□□ -2.31
TRGV6-201ENST00000417928 MMP24-AS1A0A0U1RRL7 71 aa0.61□□□□□ -2.31
TRGV6-201ENST00000417928 FLNBO75369 2602 aaKnown RBP0.61□□□□□ -2.31
TRGV6-201ENST00000417928 GCN1Q92616 2671 aaKnown RBP0.61□□□□□ -2.31
TRGV6-201ENST00000417928 HSPG2P98160 4391 aa0.6□□□□□ -2.31
TRGV6-201ENST00000417928 APC2O95996 2303 aa0.6□□□□□ -2.31
TRGV6-201ENST00000417928 DNAH9Q9NYC9 4486 aa0.6□□□□□ -2.31
TRGV6-201ENST00000417928 SPRR2DP22532 72 aa0.6□□□□□ -2.31
TRGV6-201ENST00000417928 DEFB131AP59861 70 aa0.6□□□□□ -2.31
TRGV6-201ENST00000417928 HECTD4Q9Y4D8 3996 aa0.6□□□□□ -2.31
TRGV6-201ENST00000417928 MROH2BQ7Z745 1585 aa0.6□□□□□ -2.31
TRGV6-201ENST00000417928 DNAH3Q8TD57 4116 aa0.6□□□□□ -2.31
TRGV6-201ENST00000417928 STAB1Q9NY15 2570 aa0.59□□□□□ -2.32
TRGV6-201ENST00000417928 COL7A1Q02388 2944 aa0.58□□□□□ -2.32
TRGV6-201ENST00000417928 SETD2Q9BYW2 2564 aaPredicted RBP0.58□□□□□ -2.32
TRGV6-201ENST00000417928 DCHS2Q6V1P9 2916 aa0.57□□□□□ -2.32
TRGV6-201ENST00000417928 M0QY20 66 aa0.57□□□□□ -2.32
TRGV6-201ENST00000417928 SNRPGP62308 76 aaKnown RBP0.57□□□□□ -2.32
TRGV6-201ENST00000417928 CUBNO60494 3623 aa0.57□□□□□ -2.32
TRGV6-201ENST00000417928 PKHD1L1Q86WI1 4243 aa0.56□□□□□ -2.32
TRGV6-201ENST00000417928 APOBP04114 4563 aaKnown RBP0.55□□□□□ -2.32
TRGV6-201ENST00000417928 PKHD1P08F94 4074 aa0.55□□□□□ -2.32
TRGV6-201ENST00000417928 TACC2O95359 2948 aa0.55□□□□□ -2.32
TRGV6-201ENST00000417928 DNAH2Q9P225 4427 aa0.55□□□□□ -2.32
TRGV6-201ENST00000417928 LRP1BQ9NZR2 4599 aa0.55□□□□□ -2.32
TRGV6-201ENST00000417928 DMXL1Q9Y485 3027 aa0.54□□□□□ -2.32
TRGV6-201ENST00000417928 ANK3Q12955 4377 aaKnown RBP0.54□□□□□ -2.32
TRGV6-201ENST00000417928 H3BNG1 76 aa0.53□□□□□ -2.32
TRGV6-201ENST00000417928 HMCN2Q8NDA2 5059 aa0.53□□□□□ -2.33
TRGV6-201ENST00000417928 MAST4O15021 2626 aa0.52□□□□□ -2.33
TRGV6-201ENST00000417928 C9orf92A6NGG3 77 aa0.52□□□□□ -2.33
TRGV6-201ENST00000417928 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
TRGV6-201ENST00000417928 FLGP20930 4061 aaPredicted RBP0.51□□□□□ -2.33
TRGV6-201ENST00000417928 A8MTW9 85 aa0.5□□□□□ -2.33
TRGV6-201ENST00000417928 NBEAL2Q6ZNJ1 2754 aa0.5□□□□□ -2.33
TRGV6-201ENST00000417928 SPTBN4Q9H254 2564 aa0.5□□□□□ -2.33
TRGV6-201ENST00000417928 SPENQ96T58 3664 aaKnown RBP0.49□□□□□ -2.33
TRGV6-201ENST00000417928 TENM2Q9NT68 2774 aa0.49□□□□□ -2.33
TRGV6-201ENST00000417928 FAT3Q8TDW7 4589 aa0.48□□□□□ -2.33
TRGV6-201ENST00000417928 SPRR2BP35325 72 aa0.48□□□□□ -2.33
TRGV6-201ENST00000417928 POLR2KP53803 58 aaKnown RBP0.48□□□□□ -2.33
TRGV6-201ENST00000417928 DYNC2H1Q8NCM8 4307 aaKnown RBP0.48□□□□□ -2.33
TRGV6-201ENST00000417928 MAP1AP78559 2803 aaPredicted RBP0.47□□□□□ -2.33
TRGV6-201ENST00000417928 VPS13DQ5THJ4 4388 aa0.47□□□□□ -2.33
TRGV6-201ENST00000417928 RPL39P62891 51 aaKnown RBP0.47□□□□□ -2.33
TRGV6-201ENST00000417928 M0QZ58 72 aa0.46□□□□□ -2.34
TRGV6-201ENST00000417928 TNP1P09430 55 aa0.46□□□□□ -2.34
TRGV6-201ENST00000417928 DEFB110Q30KQ9 67 aa0.46□□□□□ -2.34
TRGV6-201ENST00000417928 CLPSL2Q6UWE3 100 aa0.46□□□□□ -2.34
TRGV6-201ENST00000417928 LRRK2Q5S007 2527 aa0.46□□□□□ -2.34
TRGV6-201ENST00000417928 COL6A3P12111 3177 aa0.46□□□□□ -2.34
TRGV6-201ENST00000417928 SONP18583 2426 aaKnown RBP0.46□□□□□ -2.34
TRGV6-201ENST00000417928 ANKHD1Q8IWZ3 2542 aaKnown RBP0.45□□□□□ -2.34
TRGV6-201ENST00000417928 DMBT1Q9UGM3 2413 aaPredicted RBP0.45□□□□□ -2.34
TRGV6-201ENST00000417928 DNAH6Q9C0G6 4158 aa0.45□□□□□ -2.34
TRGV6-201ENST00000417928 RIF1Q5UIP0 2472 aaKnown RBP0.44□□□□□ -2.34
TRGV6-201ENST00000417928 AKAP9Q99996 3911 aa0.44□□□□□ -2.34
TRGV6-201ENST00000417928 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
TRGV6-201ENST00000417928 SVEP1Q4LDE5 3571 aa0.44□□□□□ -2.34
TRGV6-201ENST00000417928 ANKRD11Q6UB99 2663 aaPredicted RBP0.44□□□□□ -2.34
TRGV6-201ENST00000417928 COL6A5A8TX70 2615 aa0.44□□□□□ -2.34
TRGV6-201ENST00000417928 KALRNO60229 2985 aa0.43□□□□□ -2.34
TRGV6-201ENST00000417928 ACACAQ13085 2346 aa0.43□□□□□ -2.34
TRGV6-201ENST00000417928 FLNAP21333 2647 aaKnown RBP0.43□□□□□ -2.34
TRGV6-201ENST00000417928 HIVEP1P15822 2718 aa0.42□□□□□ -2.34
TRGV6-201ENST00000417928 RPL39LQ96EH5 51 aaKnown RBP0.42□□□□□ -2.34
TRGV6-201ENST00000417928 MTORP42345 2549 aa0.42□□□□□ -2.34
TRGV6-201ENST00000417928 LRP2P98164 4655 aa0.42□□□□□ -2.34
TRGV6-201ENST00000417928 DNAH7Q8WXX0 4024 aa0.41□□□□□ -2.34
TRGV6-201ENST00000417928 EPG5Q9HCE0 2579 aa0.41□□□□□ -2.34
TRGV6-201ENST00000417928 SPG11Q96JI7 2443 aa0.4□□□□□ -2.34
TRGV6-201ENST00000417928 FASNP49327 2511 aaKnown RBP0.4□□□□□ -2.35
TRGV6-201ENST00000417928 TEP1Q99973 2627 aaKnown RBP0.4□□□□□ -2.35
TRGV6-201ENST00000417928 DNAH8Q96JB1 4490 aa0.4□□□□□ -2.35
TRGV6-201ENST00000417928 UTP20O75691 2785 aaKnown RBP0.39□□□□□ -2.35
TRGV6-201ENST00000417928 TOMM7Q9P0U1 55 aa0.39□□□□□ -2.35
TRGV6-201ENST00000417928 ZANQ9Y493 2812 aa0.38□□□□□ -2.35
TRGV6-201ENST00000417928 LEAP2Q969E1 77 aa0.38□□□□□ -2.35
TRGV6-201ENST00000417928 RANBP2P49792 3224 aaKnown RBP0.38□□□□□ -2.35
TRGV6-201ENST00000417928 NBPF19A0A087WUL8 3843 aa0.37□□□□□ -2.35
TRGV6-201ENST00000417928 FAM186AA6NE01 2351 aa0.37□□□□□ -2.35
TRGV6-201ENST00000417928 DNAH1Q9P2D7 4330 aa0.36□□□□□ -2.35
TRGV6-201ENST00000417928 MYO18BQ8IUG5 2567 aa0.36□□□□□ -2.35
TRGV6-201ENST00000417928 SPRR2AP35326 72 aa0.36□□□□□ -2.35
TRGV6-201ENST00000417928 COL12A1Q99715 3063 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms