RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 IGKV4-1P06312 121 aa8.03□□□□□ -1.12
NUP50-204ENST00000417702 C20orf166-AS1Q96NR2 134 aa8.03□□□□□ -1.12
NUP50-204ENST00000417702 DSCR10P59022 87 aa8.02□□□□□ -1.13
NUP50-204ENST00000417702 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
NUP50-204ENST00000417702 A8MUU9 505 aa8.01□□□□□ -1.13
NUP50-204ENST00000417702 LINC00472Q9H8W2 130 aa8.01□□□□□ -1.13
NUP50-204ENST00000417702 K7EP34 96 aa8□□□□□ -1.13
NUP50-204ENST00000417702 LINC00313P59037 77 aa7.99□□□□□ -1.13
NUP50-204ENST00000417702 DEFB116Q30KQ4 102 aa7.98□□□□□ -1.13
NUP50-204ENST00000417702 M0R2T5 61 aa7.97□□□□□ -1.13
NUP50-204ENST00000417702 GTF2H5Q6ZYL4 71 aa7.97□□□□□ -1.13
NUP50-204ENST00000417702 J3KT08 172 aa7.95□□□□□ -1.14
NUP50-204ENST00000417702 LCE2DQ5TA82 110 aaPredicted RBP7.95□□□□□ -1.14
NUP50-204ENST00000417702 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
NUP50-204ENST00000417702 PRO0461Q9UI25 63 aa7.93□□□□□ -1.14
NUP50-204ENST00000417702 IGHV6-1A0A0B4J1U7 121 aa7.92□□□□□ -1.14
NUP50-204ENST00000417702 NREPQ16612 68 aa7.91□□□□□ -1.14
NUP50-204ENST00000417702 KRTAP16-1A8MUX0 517 aa7.9□□□□□ -1.14
NUP50-204ENST00000417702 KRTAP10-6P60371 365 aaPredicted RBP7.9□□□□□ -1.14
NUP50-204ENST00000417702 NOTCH2NLQ7Z3S9 236 aa7.9□□□□□ -1.14
NUP50-204ENST00000417702 A0A1B0GVX0 72 aa7.89□□□□□ -1.15
NUP50-204ENST00000417702 NDUFB1O75438 58 aa7.89□□□□□ -1.15
NUP50-204ENST00000417702 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
NUP50-204ENST00000417702 C8orf87E5RJ46 101 aa7.88□□□□□ -1.15
NUP50-204ENST00000417702 F8W1H4 67 aa7.88□□□□□ -1.15
NUP50-204ENST00000417702 A8MWP4 228 aa7.84□□□□□ -1.15
NUP50-204ENST00000417702 FLGP20930 4061 aaPredicted RBP7.82□□□□□ -1.16
NUP50-204ENST00000417702 IGKV3D-7A0A0C4DH55 119 aa7.8□□□□□ -1.16
NUP50-204ENST00000417702 ETDBQ3ZM63 59 aa7.79□□□□□ -1.16
NUP50-204ENST00000417702 BPY2O14599 106 aa7.78□□□□□ -1.16
NUP50-204ENST00000417702 Q6ZVQ6 151 aa7.78□□□□□ -1.16
NUP50-204ENST00000417702 PRR15Q8IV56 129 aa7.78□□□□□ -1.16
NUP50-204ENST00000417702 C8orf17Q9NRJ1 99 aa7.78□□□□□ -1.16
NUP50-204ENST00000417702 FAM236DA0A1B0GTK5 79 aa7.77□□□□□ -1.17
NUP50-204ENST00000417702 FAM236CP0DP71 79 aa7.77□□□□□ -1.17
NUP50-204ENST00000417702 UBL5Q9BZL1 73 aa7.76□□□□□ -1.17
NUP50-204ENST00000417702 RBM12B-AS1Q9P1G2 102 aa7.76□□□□□ -1.17
NUP50-204ENST00000417702 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
NUP50-204ENST00000417702 LINC00846Q9NV44 126 aa7.74□□□□□ -1.17
NUP50-204ENST00000417702 CRCT1Q9UGL9 99 aa7.73□□□□□ -1.17
NUP50-204ENST00000417702 K7EQZ3 153 aa7.72□□□□□ -1.17
NUP50-204ENST00000417702 HRES1P13985 223 aa7.72□□□□□ -1.17
NUP50-204ENST00000417702 A0A1B0GV90 55 aa7.71□□□□□ -1.18
NUP50-204ENST00000417702 Q8N9P0 234 aaPredicted RBP7.71□□□□□ -1.18
NUP50-204ENST00000417702 FSIP2Q5CZC0 6907 aa7.71□□□□□ -1.18
NUP50-204ENST00000417702 MPLKIPQ8TAP9 179 aa7.7□□□□□ -1.18
NUP50-204ENST00000417702 MMP24-AS1A0A0U1RRL7 71 aa7.69□□□□□ -1.18
NUP50-204ENST00000417702 TMEM254Q8TBM7 123 aa7.68□□□□□ -1.18
NUP50-204ENST00000417702 hDV103S1A0JD37 113 aa7.67□□□□□ -1.18
NUP50-204ENST00000417702 MRPL34Q9BQ48 92 aaKnown RBP7.67□□□□□ -1.18
NUP50-204ENST00000417702 SPINK7P58062 85 aa7.66□□□□□ -1.18
NUP50-204ENST00000417702 Q8N9L7 120 aa7.65□□□□□ -1.18
NUP50-204ENST00000417702 ACYP1P07311 99 aa7.63□□□□□ -1.19
NUP50-204ENST00000417702 NDUFS5O43920 106 aa7.61□□□□□ -1.19
NUP50-204ENST00000417702 WFDC13Q8IUB5 93 aa7.61□□□□□ -1.19
NUP50-204ENST00000417702 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
NUP50-204ENST00000417702 CXCL6P80162 114 aa7.6□□□□□ -1.19
NUP50-204ENST00000417702 CASC2Q6XLA1 102 aa7.6□□□□□ -1.19
NUP50-204ENST00000417702 FAM240AA0A1B0GVK7 77 aa7.59□□□□□ -1.19
NUP50-204ENST00000417702 HCG22E2RYF7 251 aa7.56□□□□□ -1.2
NUP50-204ENST00000417702 MT2AP02795 61 aa7.52□□□□□ -1.21
NUP50-204ENST00000417702 ATP5EP2Q5VTU8 51 aa7.51□□□□□ -1.21
NUP50-204ENST00000417702 J3QR89 54 aa7.47□□□□□ -1.21
NUP50-204ENST00000417702 KRTAP10-10P60014 251 aa7.47□□□□□ -1.21
NUP50-204ENST00000417702 MT1FP04733 61 aa7.46□□□□□ -1.22
NUP50-204ENST00000417702 Q5W150 140 aa7.46□□□□□ -1.22
NUP50-204ENST00000417702 LINC00643Q86TS7 51 aa7.45□□□□□ -1.22
NUP50-204ENST00000417702 IGKV2D-30A0A075B6S6 120 aa7.44□□□□□ -1.22
NUP50-204ENST00000417702 IGKV2-30P06310 120 aa7.44□□□□□ -1.22
NUP50-204ENST00000417702 HIST1H4AP62805 103 aaKnown RBP7.43□□□□□ -1.22
NUP50-204ENST00000417702 TP53AIP1Q9HCN2 124 aa7.43□□□□□ -1.22
NUP50-204ENST00000417702 C7orf65Q6ZTY9 151 aa7.42□□□□□ -1.22
NUP50-204ENST00000417702 H1FX-AS1Q4G0G2 97 aa7.4□□□□□ -1.22
NUP50-204ENST00000417702 KRTAP9-3Q9BYQ3 159 aa7.38□□□□□ -1.23
NUP50-204ENST00000417702 USH2AO75445 5202 aa7.33□□□□□ -1.24
NUP50-204ENST00000417702 LCE2BO14633 110 aa7.33□□□□□ -1.24
NUP50-204ENST00000417702 A0A087WVE0 104 aa7.32□□□□□ -1.24
NUP50-204ENST00000417702 K7ERU9 68 aa7.32□□□□□ -1.24
NUP50-204ENST00000417702 C4orf26Q17RF5 130 aa7.29□□□□□ -1.24
NUP50-204ENST00000417702 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
NUP50-204ENST00000417702 TRAV22A0A0B4J277 110 aa7.27□□□□□ -1.25
NUP50-204ENST00000417702 UQCRQO14949 82 aa7.27□□□□□ -1.25
NUP50-204ENST00000417702 LOC101927531A0A1B0GV80 90 aa7.22□□□□□ -1.25
NUP50-204ENST00000417702 ATOX1O00244 68 aa7.22□□□□□ -1.25
NUP50-204ENST00000417702 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
NUP50-204ENST00000417702 CYP4F30PQ9H0H9 118 aa7.21□□□□□ -1.26
NUP50-204ENST00000417702 H0Y9P7 68 aa7.2□□□□□ -1.26
NUP50-204ENST00000417702 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
NUP50-204ENST00000417702 C1orf64Q8NEQ6 169 aa7.17□□□□□ -1.26
NUP50-204ENST00000417702 IMUPQ9GZP8 106 aa7.17□□□□□ -1.26
NUP50-204ENST00000417702 SCGB1A1P11684 91 aa7.16□□□□□ -1.26
NUP50-204ENST00000417702 OCR1Q9BZK8 76 aa7.16□□□□□ -1.26
NUP50-204ENST00000417702 KRTAP9-7A8MTY7 169 aa7.15□□□□□ -1.26
NUP50-204ENST00000417702 C5orf47Q569G3 176 aa7.15□□□□□ -1.26
NUP50-204ENST00000417702 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
NUP50-204ENST00000417702 S4R3F8 94 aa7.15□□□□□ -1.26
NUP50-204ENST00000417702 MP68P56378 58 aa7.14□□□□□ -1.27
NUP50-204ENST00000417702 MT-ATP8P03928 68 aa7.13□□□□□ -1.27
NUP50-204ENST00000417702 FCGBPQ9Y6R7 5405 aaPredicted RBP7.12□□□□□ -1.27
NUP50-204ENST00000417702 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms