RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 COMMD7Q86VX2 200 aa0.33□□□□□ -2.36
LINC00428-201ENST00000415620 TOMM6Q96B49 74 aa0.33□□□□□ -2.36
LINC00428-201ENST00000415620 MIEN1Q9BRT3 115 aa0.33□□□□□ -2.36
LINC00428-201ENST00000415620 CBY1Q9Y3M2 126 aa0.33□□□□□ -2.36
LINC00428-201ENST00000415620 hDV103S1A0JD37 113 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 NAP1L6A6NFF2 107 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 C11orf86A6NJI1 115 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 RHEBQ15382 184 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 ORMDL2Q53FV1 153 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 TMEM170BQ5T4T1 132 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 Q6ZQY7 126 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 KCNRGQ8N5I3 272 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 Q8N8P6 123 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 SPANXA2-OT1Q8N9U9 137 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 PPP1R1CQ8WVI7 109 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 MBD3L1Q8WWY6 194 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 PRELID3AQ96N28 172 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 SCGB3A1Q96QR1 104 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 BIN3Q9NQY0 253 aa0.32□□□□□ -2.36
LINC00428-201ENST00000415620 LOC110117498A0A087WWA1 95 aa0.31□□□□□ -2.36
LINC00428-201ENST00000415620 TRBV7-6A0A0J9YX20 115 aa0.31□□□□□ -2.36
LINC00428-201ENST00000415620 LINC01546A6NGU7 62 aa0.31□□□□□ -2.36
LINC00428-201ENST00000415620 MPC2O95563 127 aa0.31□□□□□ -2.36
LINC00428-201ENST00000415620 H2BFSP57053 126 aa0.31□□□□□ -2.36
LINC00428-201ENST00000415620 PYDC2Q56P42 97 aa0.31□□□□□ -2.36
LINC00428-201ENST00000415620 AKR1C8PQ5T2L2 129 aa0.31□□□□□ -2.36
LINC00428-201ENST00000415620 ORMDL3Q8N138 153 aa0.31□□□□□ -2.36
LINC00428-201ENST00000415620 MAP1LC3AQ9H492 121 aa0.31□□□□□ -2.36
LINC00428-201ENST00000415620 MT-ATP8P03928 68 aa0.3□□□□□ -2.36
LINC00428-201ENST00000415620 TSPEAR-AS2P59090 65 aa0.3□□□□□ -2.36
LINC00428-201ENST00000415620 BATF3Q9NR55 127 aa0.3□□□□□ -2.36
LINC00428-201ENST00000415620 C8orf17Q9NRJ1 99 aa0.3□□□□□ -2.36
LINC00428-201ENST00000415620 TRAPPC1Q9Y5R8 145 aa0.3□□□□□ -2.36
LINC00428-201ENST00000415620 LINC00587B1AMM8 73 aa0.29□□□□□ -2.36
LINC00428-201ENST00000415620 HCG22E2RYF7 251 aa0.29□□□□□ -2.36
LINC00428-201ENST00000415620 HBDP02042 147 aa0.29□□□□□ -2.36
LINC00428-201ENST00000415620 MRPL54Q6P161 138 aaKnown RBP0.29□□□□□ -2.36
LINC00428-201ENST00000415620 LINC00575Q6W349 94 aa0.29□□□□□ -2.36
LINC00428-201ENST00000415620 SPANXDQ9BXN6 97 aa0.29□□□□□ -2.36
LINC00428-201ENST00000415620 GNG13Q9P2W3 67 aa0.29□□□□□ -2.36
LINC00428-201ENST00000415620 V9GYH0 126 aa0.29□□□□□ -2.36
LINC00428-201ENST00000415620 MYMXA0A1B0GTQ4 84 aa0.28□□□□□ -2.36
LINC00428-201ENST00000415620 NDUFC1O43677 76 aa0.28□□□□□ -2.36
LINC00428-201ENST00000415620 NDUFS5O43920 106 aa0.28□□□□□ -2.36
LINC00428-201ENST00000415620 MUSTN1Q8IVN3 82 aa0.28□□□□□ -2.36
LINC00428-201ENST00000415620 FAM213BQ8TBF2 198 aa0.28□□□□□ -2.36
LINC00428-201ENST00000415620 SNHG12Q9BXW3 62 aa0.28□□□□□ -2.36
LINC00428-201ENST00000415620 SPANXCQ9NY87 97 aa0.28□□□□□ -2.36
LINC00428-201ENST00000415620 A0A1B0GXF2 115 aa0.27□□□□□ -2.37
LINC00428-201ENST00000415620 TMEM250H0YL14 139 aa0.27□□□□□ -2.37
LINC00428-201ENST00000415620 K7EMI3 77 aa0.27□□□□□ -2.37
LINC00428-201ENST00000415620 TIMM17BO60830 172 aa0.27□□□□□ -2.37
LINC00428-201ENST00000415620 PET100P0DJ07 73 aa0.27□□□□□ -2.37
LINC00428-201ENST00000415620 MRPL34Q9BQ48 92 aaKnown RBP0.27□□□□□ -2.37
LINC00428-201ENST00000415620 MANBALQ9NQG1 85 aa0.27□□□□□ -2.37
LINC00428-201ENST00000415620 NAT8BQ9UHF3 227 aa0.27□□□□□ -2.37
LINC00428-201ENST00000415620 V9GYV3 84 aa0.27□□□□□ -2.37
LINC00428-201ENST00000415620 F8W036 122 aa0.26□□□□□ -2.37
LINC00428-201ENST00000415620 PDE6DO43924 150 aa0.26□□□□□ -2.37
LINC00428-201ENST00000415620 IL7P13232 177 aa0.26□□□□□ -2.37
LINC00428-201ENST00000415620 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.26□□□□□ -2.37
LINC00428-201ENST00000415620 C20orf197Q8N268 126 aa0.26□□□□□ -2.37
LINC00428-201ENST00000415620 MMP24-AS1A0A0U1RRL7 71 aa0.25□□□□□ -2.37
LINC00428-201ENST00000415620 A0A1B0GW15 77 aa0.25□□□□□ -2.37
LINC00428-201ENST00000415620 hADV29S1A0JD25 119 aa0.25□□□□□ -2.37
LINC00428-201ENST00000415620 C9JQL5 133 aa0.25□□□□□ -2.37
LINC00428-201ENST00000415620 G0S2P27469 103 aa0.25□□□□□ -2.37
LINC00428-201ENST00000415620 KRTAP25-1Q3LHN0 102 aa0.25□□□□□ -2.37
LINC00428-201ENST00000415620 BAGE3Q86Y29 109 aa0.25□□□□□ -2.37
LINC00428-201ENST00000415620 TMEM254Q8TBM7 123 aa0.25□□□□□ -2.37
LINC00428-201ENST00000415620 SMIM11BQ8TCY0 68 aa0.25□□□□□ -2.37
LINC00428-201ENST00000415620 LINC00308Q8TCZ7 52 aa0.25□□□□□ -2.37
LINC00428-201ENST00000415620 NAT8Q9UHE5 227 aa0.25□□□□□ -2.37
LINC00428-201ENST00000415620 LAMTOR2Q9Y2Q5 125 aa0.25□□□□□ -2.37
LINC00428-201ENST00000415620 TRBV7-4A0A0J9YYF1 115 aa0.24□□□□□ -2.37
LINC00428-201ENST00000415620 A0A1B0GV72 72 aa0.24□□□□□ -2.37
LINC00428-201ENST00000415620 SMIM27A0A1W2PRY6 76 aa0.24□□□□□ -2.37
LINC00428-201ENST00000415620 A6NDN8 102 aa0.24□□□□□ -2.37
LINC00428-201ENST00000415620 H3BMG7 143 aa0.24□□□□□ -2.37
LINC00428-201ENST00000415620 K7EP34 96 aa0.24□□□□□ -2.37
LINC00428-201ENST00000415620 LEPROTO15243 131 aa0.24□□□□□ -2.37
LINC00428-201ENST00000415620 NDUFB1O75438 58 aa0.24□□□□□ -2.37
LINC00428-201ENST00000415620 TRIQKQ629K1 86 aa0.24□□□□□ -2.37
LINC00428-201ENST00000415620 PPDPFLQ8WWR9 84 aa0.24□□□□□ -2.37
LINC00428-201ENST00000415620 OSTCQ9NRP0 149 aa0.24□□□□□ -2.37
LINC00428-201ENST00000415620 CENPXA8MT69 81 aa0.23□□□□□ -2.37
LINC00428-201ENST00000415620 J3KT08 172 aa0.22□□□□□ -2.37
LINC00428-201ENST00000415620 J3QQQ9 107 aa0.22□□□□□ -2.37
LINC00428-201ENST00000415620 TRACP01848 142 aa0.22□□□□□ -2.37
LINC00428-201ENST00000415620 S100A8P05109 93 aa0.22□□□□□ -2.37
LINC00428-201ENST00000415620 CEBPGP53567 150 aa0.22□□□□□ -2.37
LINC00428-201ENST00000415620 IFITM2Q01629 132 aa0.22□□□□□ -2.37
LINC00428-201ENST00000415620 UQCC3Q6UW78 93 aa0.22□□□□□ -2.37
LINC00428-201ENST00000415620 Q6ZQT0 140 aa0.22□□□□□ -2.37
LINC00428-201ENST00000415620 LINC01549A6NIU2 74 aa0.21□□□□□ -2.38
LINC00428-201ENST00000415620 CCKP06307 115 aa0.21□□□□□ -2.38
LINC00428-201ENST00000415620 PMCHL1Q16048 86 aa0.21□□□□□ -2.38
LINC00428-201ENST00000415620 TRAV12-1A0A0B4J245 112 aa0.2□□□□□ -2.38
LINC00428-201ENST00000415620 UMAD1C9J7I0 102 aa0.2□□□□□ -2.38
LINC00428-201ENST00000415620 ATP5L2Q7Z4Y8 100 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms