RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 ANK3Q12955 4377 aaKnown RBP-0.07□□□□□ -2.42
ATG4C-204ENST00000414558 DNAH9Q9NYC9 4486 aa-0.07□□□□□ -2.42
ATG4C-204ENST00000414558 HIVEP1P15822 2718 aa-0.07□□□□□ -2.42
ATG4C-204ENST00000414558 ALS2Q96Q42 1657 aa-0.08□□□□□ -2.42
ATG4C-204ENST00000414558 ANKRD11Q6UB99 2663 aaPredicted RBP-0.08□□□□□ -2.42
ATG4C-204ENST00000414558 GCN1Q92616 2671 aaKnown RBP-0.08□□□□□ -2.42
ATG4C-204ENST00000414558 A0A1B0GUL6 1792 aa-0.08□□□□□ -2.42
ATG4C-204ENST00000414558 NBPF19A0A087WUL8 3843 aa-0.08□□□□□ -2.42
ATG4C-204ENST00000414558 A0A087WWC5 75 aa-0.08□□□□□ -2.42
ATG4C-204ENST00000414558 K7EMI3 77 aa-0.08□□□□□ -2.42
ATG4C-204ENST00000414558 S4R3F8 94 aa-0.08□□□□□ -2.42
ATG4C-204ENST00000414558 MXRA5Q9NR99 2828 aa-0.08□□□□□ -2.42
ATG4C-204ENST00000414558 ERICH3Q5RHP9 1530 aa-0.08□□□□□ -2.42
ATG4C-204ENST00000414558 DMXL1Q9Y485 3027 aa-0.08□□□□□ -2.42
ATG4C-204ENST00000414558 PKD1L2Q7Z442 2459 aa-0.09□□□□□ -2.42
ATG4C-204ENST00000414558 GLI2P10070 1586 aa-0.09□□□□□ -2.42
ATG4C-204ENST00000414558 MAST1Q9Y2H9 1570 aa-0.09□□□□□ -2.42
ATG4C-204ENST00000414558 LINC01549A6NIU2 74 aa-0.09□□□□□ -2.42
ATG4C-204ENST00000414558 WT1-ASQ06250 92 aa-0.09□□□□□ -2.42
ATG4C-204ENST00000414558 C6orf48Q9UBA6 75 aa-0.09□□□□□ -2.42
ATG4C-204ENST00000414558 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.09□□□□□ -2.42
ATG4C-204ENST00000414558 MTORP42345 2549 aa-0.09□□□□□ -2.42
ATG4C-204ENST00000414558 TACC2O95359 2948 aa-0.1□□□□□ -2.42
ATG4C-204ENST00000414558 LAMA5O15230 3695 aa-0.1□□□□□ -2.42
ATG4C-204ENST00000414558 SACSQ9NZJ4 4579 aa-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 H3BUA1 57 aa-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 MT1AP04731 61 aa-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 RPS27P42677 84 aaKnown RBP-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 SERF2P84101 59 aa-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 KRTAP19-7Q3SYF9 63 aa-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 NCBP2-AS2Q69YL0 99 aa-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 RPS27LQ71UM5 84 aaKnown RBP-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 SPRR2FQ96RM1 72 aa-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 KMT2CQ8NEZ4 4911 aaKnown RBP-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 LRRK2Q5S007 2527 aa-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 KALRNO60229 2985 aa-0.1□□□□□ -2.43
ATG4C-204ENST00000414558 PCLOQ9Y6V0 5065 aa-0.11□□□□□ -2.43
ATG4C-204ENST00000414558 FAM186AA6NE01 2351 aa-0.11□□□□□ -2.43
ATG4C-204ENST00000414558 FCER1GP30273 86 aa-0.11□□□□□ -2.43
ATG4C-204ENST00000414558 APOBP04114 4563 aaKnown RBP-0.11□□□□□ -2.43
ATG4C-204ENST00000414558 VPS13DQ5THJ4 4388 aa-0.11□□□□□ -2.43
ATG4C-204ENST00000414558 NBEAQ8NFP9 2946 aa-0.12□□□□□ -2.43
ATG4C-204ENST00000414558 MUC12Q9UKN1 5478 aa-0.12□□□□□ -2.43
ATG4C-204ENST00000414558 SMIM31A0A1B0GVY4 71 aa-0.12□□□□□ -2.43
ATG4C-204ENST00000414558 NMES1Q9C002 83 aa-0.12□□□□□ -2.43
ATG4C-204ENST00000414558 A0A0C4DFX4 3053 aa-0.12□□□□□ -2.43
ATG4C-204ENST00000414558 UGGT1Q9NYU2 1555 aa-0.12□□□□□ -2.43
ATG4C-204ENST00000414558 DNAH2Q9P225 4427 aa-0.12□□□□□ -2.43
ATG4C-204ENST00000414558 DNAH11Q96DT5 4516 aa-0.12□□□□□ -2.43
ATG4C-204ENST00000414558 LAMA1P25391 3075 aa-0.12□□□□□ -2.43
ATG4C-204ENST00000414558 SYCP2Q9BX26 1530 aa-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 ABCA5Q8WWZ7 1642 aa-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 FASNP49327 2511 aaKnown RBP-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 RANBP2P49792 3224 aaKnown RBP-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 NBEAL2Q6ZNJ1 2754 aa-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 MROH2AA6NES4 1674 aa-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 FAM208AQ9UK61 1670 aaKnown RBP-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 PRXQ9BXM0 1461 aa-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 IGLV5-48A0A075B6I7 105 aa-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 M0R1W7 72 aa-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 SMIM5Q71RC9 77 aa-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 S100ZQ8WXG8 99 aa-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 NOP10Q9NPE3 64 aaKnown RBP-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 UTP20O75691 2785 aaKnown RBP-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 CPS1P31327 1500 aa-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 EEA1Q15075 1411 aa-0.13□□□□□ -2.43
ATG4C-204ENST00000414558 SPENQ96T58 3664 aaKnown RBP-0.14□□□□□ -2.43
ATG4C-204ENST00000414558 LMO7Q8WWI1 1683 aa-0.14□□□□□ -2.43
ATG4C-204ENST00000414558 UBR4Q5T4S7 5183 aa-0.14□□□□□ -2.43
ATG4C-204ENST00000414558 DNAH1Q9P2D7 4330 aa-0.14□□□□□ -2.43
ATG4C-204ENST00000414558 ACACBO00763 2458 aa-0.14□□□□□ -2.43
ATG4C-204ENST00000414558 DEFB110Q30KQ9 67 aa-0.14□□□□□ -2.43
ATG4C-204ENST00000414558 TMEM167BQ9NRX6 74 aa-0.14□□□□□ -2.43
ATG4C-204ENST00000414558 ACACAQ13085 2346 aa-0.14□□□□□ -2.43
ATG4C-204ENST00000414558 MYO18BQ8IUG5 2567 aa-0.14□□□□□ -2.43
ATG4C-204ENST00000414558 ADCY10Q96PN6 1610 aa-0.15□□□□□ -2.43
ATG4C-204ENST00000414558 MMP24-AS1A0A0U1RRL7 71 aa-0.15□□□□□ -2.43
ATG4C-204ENST00000414558 IGIPA6NJ69 53 aa-0.15□□□□□ -2.43
ATG4C-204ENST00000414558 SFTA3P0C7M3 94 aa-0.15□□□□□ -2.43
ATG4C-204ENST00000414558 KRTAP19-8Q3LI54 63 aa-0.15□□□□□ -2.43
ATG4C-204ENST00000414558 STARD9Q9P2P6 4700 aa-0.15□□□□□ -2.43
ATG4C-204ENST00000414558 TRIOO75962 3097 aa-0.15□□□□□ -2.43
ATG4C-204ENST00000414558 WDR87Q6ZQQ6 2873 aa-0.16□□□□□ -2.43
ATG4C-204ENST00000414558 MGAM2Q2M2H8 2515 aa-0.16□□□□□ -2.43
ATG4C-204ENST00000414558 KIF21BO75037 1637 aa-0.16□□□□□ -2.43
ATG4C-204ENST00000414558 HERC1Q15751 4861 aa-0.16□□□□□ -2.43
ATG4C-204ENST00000414558 PREX2Q70Z35 1606 aa-0.16□□□□□ -2.43
ATG4C-204ENST00000414558 NRXN3Q9Y4C0 1643 aa-0.16□□□□□ -2.43
ATG4C-204ENST00000414558 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.16□□□□□ -2.43
ATG4C-204ENST00000414558 MUC17Q685J3 4493 aa-0.16□□□□□ -2.43
ATG4C-204ENST00000414558 TNP1P09430 55 aa-0.16□□□□□ -2.44
ATG4C-204ENST00000414558 ITPR3Q14573 2671 aa-0.16□□□□□ -2.44
ATG4C-204ENST00000414558 RELNP78509 3460 aa-0.17□□□□□ -2.44
ATG4C-204ENST00000414558 EFCAB6Q5THR3 1501 aa-0.17□□□□□ -2.44
ATG4C-204ENST00000414558 DNAH8Q96JB1 4490 aa-0.17□□□□□ -2.44
ATG4C-204ENST00000414558 FAT1Q14517 4588 aa-0.17□□□□□ -2.44
ATG4C-204ENST00000414558 RIF1Q5UIP0 2472 aaKnown RBP-0.17□□□□□ -2.44
ATG4C-204ENST00000414558 CCDC168Q8NDH2 2452 aa-0.17□□□□□ -2.44
ATG4C-204ENST00000414558 DNAH7Q8WXX0 4024 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms