RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 DSCR10P59022 87 aa7.84□□□□□ -1.15
CHD1-202ENST00000414220 NDUFB1O75438 58 aa7.83□□□□□ -1.16
CHD1-202ENST00000414220 IGHV6-1A0A0B4J1U7 121 aa7.82□□□□□ -1.16
CHD1-202ENST00000414220 C8orf87E5RJ46 101 aa7.82□□□□□ -1.16
CHD1-202ENST00000414220 C20orf166-AS1Q96NR2 134 aa7.82□□□□□ -1.16
CHD1-202ENST00000414220 A8MUU9 505 aa7.8□□□□□ -1.16
CHD1-202ENST00000414220 A0A1B0GVX0 72 aa7.79□□□□□ -1.16
CHD1-202ENST00000414220 NREPQ16612 68 aa7.79□□□□□ -1.16
CHD1-202ENST00000414220 LCE2AQ5TA79 106 aaPredicted RBP7.79□□□□□ -1.16
CHD1-202ENST00000414220 PCP4L1A6NKN8 68 aa7.78□□□□□ -1.16
CHD1-202ENST00000414220 MTURNQ8N3F0 131 aa7.78□□□□□ -1.16
CHD1-202ENST00000414220 FAT4Q6V0I7 4981 aa7.77□□□□□ -1.17
CHD1-202ENST00000414220 LOC100996750A0A140TA64 210 aa7.75□□□□□ -1.17
CHD1-202ENST00000414220 KRTAP4-6Q9BYQ5 205 aa7.75□□□□□ -1.17
CHD1-202ENST00000414220 GTF2H5Q6ZYL4 71 aa7.74□□□□□ -1.17
CHD1-202ENST00000414220 A8MWP4 228 aa7.73□□□□□ -1.17
CHD1-202ENST00000414220 K7EP34 96 aa7.73□□□□□ -1.17
CHD1-202ENST00000414220 COX6B2Q6YFQ2 88 aa7.73□□□□□ -1.17
CHD1-202ENST00000414220 KRTAP16-1A8MUX0 517 aa7.71□□□□□ -1.18
CHD1-202ENST00000414220 NOTCH2NLQ7Z3S9 236 aa7.71□□□□□ -1.18
CHD1-202ENST00000414220 BPY2O14599 106 aa7.66□□□□□ -1.18
CHD1-202ENST00000414220 SMCPP49901 116 aaPredicted RBP7.66□□□□□ -1.18
CHD1-202ENST00000414220 C8orf17Q9NRJ1 99 aa7.66□□□□□ -1.18
CHD1-202ENST00000414220 IGKV3D-7A0A0C4DH55 119 aa7.65□□□□□ -1.18
CHD1-202ENST00000414220 F8W1H4 67 aa7.65□□□□□ -1.18
CHD1-202ENST00000414220 PRR15Q8IV56 129 aa7.65□□□□□ -1.18
CHD1-202ENST00000414220 LCE2CQ5TA81 110 aa7.63□□□□□ -1.19
CHD1-202ENST00000414220 PRO0461Q9UI25 63 aa7.63□□□□□ -1.19
CHD1-202ENST00000414220 KRTAP19-2Q3LHN2 52 aa7.62□□□□□ -1.19
CHD1-202ENST00000414220 Q6ZVQ6 151 aa7.62□□□□□ -1.19
CHD1-202ENST00000414220 UBL5Q9BZL1 73 aa7.62□□□□□ -1.19
CHD1-202ENST00000414220 Q8N9P0 234 aaPredicted RBP7.61□□□□□ -1.19
CHD1-202ENST00000414220 ZCCHC13Q8WW36 166 aaKnown RBP7.6□□□□□ -1.19
CHD1-202ENST00000414220 M0R2T5 61 aa7.58□□□□□ -1.2
CHD1-202ENST00000414220 MT1HP80294 61 aa7.58□□□□□ -1.2
CHD1-202ENST00000414220 TMEM254Q8TBM7 123 aa7.58□□□□□ -1.2
CHD1-202ENST00000414220 MRPL34Q9BQ48 92 aaKnown RBP7.58□□□□□ -1.2
CHD1-202ENST00000414220 K7EQZ3 153 aa7.57□□□□□ -1.2
CHD1-202ENST00000414220 RBM12B-AS1Q9P1G2 102 aa7.57□□□□□ -1.2
CHD1-202ENST00000414220 hDV103S1A0JD37 113 aa7.56□□□□□ -1.2
CHD1-202ENST00000414220 FAM236DA0A1B0GTK5 79 aa7.55□□□□□ -1.2
CHD1-202ENST00000414220 FAM236CP0DP71 79 aa7.55□□□□□ -1.2
CHD1-202ENST00000414220 MMP24-AS1A0A0U1RRL7 71 aa7.54□□□□□ -1.2
CHD1-202ENST00000414220 NDUFS5O43920 106 aa7.54□□□□□ -1.2
CHD1-202ENST00000414220 ETDBQ3ZM63 59 aa7.54□□□□□ -1.2
CHD1-202ENST00000414220 LINC00846Q9NV44 126 aa7.53□□□□□ -1.2
CHD1-202ENST00000414220 SPINK7P58062 85 aa7.5□□□□□ -1.21
CHD1-202ENST00000414220 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
CHD1-202ENST00000414220 WFDC13Q8IUB5 93 aa7.47□□□□□ -1.21
CHD1-202ENST00000414220 HRES1P13985 223 aa7.46□□□□□ -1.22
CHD1-202ENST00000414220 Q8N9L7 120 aa7.46□□□□□ -1.22
CHD1-202ENST00000414220 ACYP1P07311 99 aa7.45□□□□□ -1.22
CHD1-202ENST00000414220 CXCL6P80162 114 aa7.43□□□□□ -1.22
CHD1-202ENST00000414220 KRTAP9-2Q9BYQ4 174 aa7.43□□□□□ -1.22
CHD1-202ENST00000414220 HCG22E2RYF7 251 aa7.42□□□□□ -1.22
CHD1-202ENST00000414220 MPLKIPQ8TAP9 179 aa7.42□□□□□ -1.22
CHD1-202ENST00000414220 KRTAP10-6P60371 365 aaPredicted RBP7.41□□□□□ -1.22
CHD1-202ENST00000414220 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
CHD1-202ENST00000414220 FAM240AA0A1B0GVK7 77 aa7.36□□□□□ -1.23
CHD1-202ENST00000414220 C7orf65Q6ZTY9 151 aa7.35□□□□□ -1.23
CHD1-202ENST00000414220 FLGP20930 4061 aaPredicted RBP7.34□□□□□ -1.23
CHD1-202ENST00000414220 IGKV2D-30A0A075B6S6 120 aa7.34□□□□□ -1.23
CHD1-202ENST00000414220 IGKV2-30P06310 120 aa7.34□□□□□ -1.23
CHD1-202ENST00000414220 TP53AIP1Q9HCN2 124 aa7.34□□□□□ -1.23
CHD1-202ENST00000414220 A0A1B0GV90 55 aa7.32□□□□□ -1.24
CHD1-202ENST00000414220 ATP5EP2Q5VTU8 51 aa7.32□□□□□ -1.24
CHD1-202ENST00000414220 Q5W150 140 aa7.32□□□□□ -1.24
CHD1-202ENST00000414220 J3QR89 54 aa7.26□□□□□ -1.25
CHD1-202ENST00000414220 HIST1H4AP62805 103 aaKnown RBP7.26□□□□□ -1.25
CHD1-202ENST00000414220 LINC00643Q86TS7 51 aa7.24□□□□□ -1.25
CHD1-202ENST00000414220 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
CHD1-202ENST00000414220 C4orf26Q17RF5 130 aa7.17□□□□□ -1.26
CHD1-202ENST00000414220 KRTAP9-8Q9BYQ0 159 aa7.17□□□□□ -1.26
CHD1-202ENST00000414220 KRTAP9-6A0A140TA67 174 aa7.15□□□□□ -1.26
CHD1-202ENST00000414220 TRAV22A0A0B4J277 110 aa7.14□□□□□ -1.27
CHD1-202ENST00000414220 UQCRQO14949 82 aa7.13□□□□□ -1.27
CHD1-202ENST00000414220 LOC101927531A0A1B0GV80 90 aa7.11□□□□□ -1.27
CHD1-202ENST00000414220 ATOX1O00244 68 aa7.11□□□□□ -1.27
CHD1-202ENST00000414220 MT2AP02795 61 aa7.1□□□□□ -1.27
CHD1-202ENST00000414220 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
CHD1-202ENST00000414220 A0A087WVE0 104 aa7.09□□□□□ -1.27
CHD1-202ENST00000414220 C1orf64Q8NEQ6 169 aa7.09□□□□□ -1.27
CHD1-202ENST00000414220 CYP4F30PQ9H0H9 118 aa7.08□□□□□ -1.28
CHD1-202ENST00000414220 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
CHD1-202ENST00000414220 H0Y9P7 68 aa7.06□□□□□ -1.28
CHD1-202ENST00000414220 MT1FP04733 61 aa7.03□□□□□ -1.28
CHD1-202ENST00000414220 MP68P56378 58 aa7.03□□□□□ -1.28
CHD1-202ENST00000414220 S4R3F8 94 aa7.03□□□□□ -1.28
CHD1-202ENST00000414220 K7ERU9 68 aa7.01□□□□□ -1.29
CHD1-202ENST00000414220 SCGB1A1P11684 91 aa7.01□□□□□ -1.29
CHD1-202ENST00000414220 CSAG1Q6PB30 78 aa6.99□□□□□ -1.29
CHD1-202ENST00000414220 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
CHD1-202ENST00000414220 KRTAP3-1Q9BYR8 98 aa6.98□□□□□ -1.29
CHD1-202ENST00000414220 C5orf47Q569G3 176 aa6.97□□□□□ -1.29
CHD1-202ENST00000414220 LINC00208Q96KT6 92 aa6.97□□□□□ -1.29
CHD1-202ENST00000414220 OCR1Q9BZK8 76 aa6.96□□□□□ -1.3
CHD1-202ENST00000414220 FSIP2Q5CZC0 6907 aa6.95□□□□□ -1.3
CHD1-202ENST00000414220 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
CHD1-202ENST00000414220 IMUPQ9GZP8 106 aa6.95□□□□□ -1.3
CHD1-202ENST00000414220 H3BPC8 53 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms