RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 LINC00472Q9H8W2 130 aa9.01□□□□□ -0.97
SF1-207ENST00000413951 CRCT1Q9UGL9 99 aa8.99□□□□□ -0.97
SF1-207ENST00000413951 FSIP2Q5CZC0 6907 aa8.98□□□□□ -0.97
SF1-207ENST00000413951 MT1HP80294 61 aa8.98□□□□□ -0.97
SF1-207ENST00000413951 KRTAP19-2Q3LHN2 52 aa8.97□□□□□ -0.97
SF1-207ENST00000413951 RPL37P61927 97 aaKnown RBP8.95□□□□□ -0.98
SF1-207ENST00000413951 A0A1B0GV90 55 aa8.93□□□□□ -0.98
SF1-207ENST00000413951 IGKV4-1P06312 121 aa8.92□□□□□ -0.98
SF1-207ENST00000413951 ETDBQ3ZM63 59 aa8.92□□□□□ -0.98
SF1-207ENST00000413951 COX6B2Q6YFQ2 88 aa8.91□□□□□ -0.98
SF1-207ENST00000413951 SIGMAR1Q99720 223 aa8.91□□□□□ -0.98
SF1-207ENST00000413951 M0R2T5 61 aa8.9□□□□□ -0.98
SF1-207ENST00000413951 J3KT08 172 aa8.89□□□□□ -0.99
SF1-207ENST00000413951 DEFB116Q30KQ4 102 aa8.89□□□□□ -0.99
SF1-207ENST00000413951 LORP23490 312 aaPredicted RBP8.85□□□□□ -0.99
SF1-207ENST00000413951 KRTAP10-6P60371 365 aaPredicted RBP8.85□□□□□ -0.99
SF1-207ENST00000413951 NREPQ16612 68 aa8.85□□□□□ -0.99
SF1-207ENST00000413951 A0A1B0GVX0 72 aa8.82□□□□□ -1
SF1-207ENST00000413951 A8MWP4 228 aa8.81□□□□□ -1
SF1-207ENST00000413951 ATP11AUNQ6ZP68 121 aa8.81□□□□□ -1
SF1-207ENST00000413951 Q6ZVQ6 151 aa8.81□□□□□ -1
SF1-207ENST00000413951 LINC00846Q9NV44 126 aa8.81□□□□□ -1
SF1-207ENST00000413951 DSCR10P59022 87 aa8.8□□□□□ -1
SF1-207ENST00000413951 IGHV6-1A0A0B4J1U7 121 aa8.79□□□□□ -1
SF1-207ENST00000413951 KRTAP16-1A8MUX0 517 aa8.79□□□□□ -1
SF1-207ENST00000413951 LINC00313P59037 77 aa8.79□□□□□ -1
SF1-207ENST00000413951 Q75L30 129 aa8.79□□□□□ -1
SF1-207ENST00000413951 NOTCH2NLQ7Z3S9 236 aa8.79□□□□□ -1
SF1-207ENST00000413951 C20orf166-AS1Q96NR2 134 aa8.79□□□□□ -1
SF1-207ENST00000413951 C8orf87E5RJ46 101 aa8.78□□□□□ -1
SF1-207ENST00000413951 IGKV3D-7A0A0C4DH55 119 aa8.77□□□□□ -1.01
SF1-207ENST00000413951 A8MUU9 505 aa8.76□□□□□ -1.01
SF1-207ENST00000413951 NDUFB1O75438 58 aa8.76□□□□□ -1.01
SF1-207ENST00000413951 PRR15Q8IV56 129 aa8.75□□□□□ -1.01
SF1-207ENST00000413951 UBL5Q9BZL1 73 aa8.75□□□□□ -1.01
SF1-207ENST00000413951 FAM240AA0A1B0GVK7 77 aa8.74□□□□□ -1.01
SF1-207ENST00000413951 BPY2O14599 106 aa8.74□□□□□ -1.01
SF1-207ENST00000413951 C8orf17Q9NRJ1 99 aa8.71□□□□□ -1.02
SF1-207ENST00000413951 K7EQZ3 153 aa8.7□□□□□ -1.02
SF1-207ENST00000413951 ACYP1P07311 99 aa8.7□□□□□ -1.02
SF1-207ENST00000413951 MMP24-AS1A0A0U1RRL7 71 aa8.67□□□□□ -1.02
SF1-207ENST00000413951 Q8N9P0 234 aaPredicted RBP8.65□□□□□ -1.02
SF1-207ENST00000413951 FLGP20930 4061 aaPredicted RBP8.64□□□□□ -1.03
SF1-207ENST00000413951 CXCL6P80162 114 aa8.63□□□□□ -1.03
SF1-207ENST00000413951 Q8N9L7 120 aa8.63□□□□□ -1.03
SF1-207ENST00000413951 TMEM254Q8TBM7 123 aa8.62□□□□□ -1.03
SF1-207ENST00000413951 hDV103S1A0JD37 113 aa8.59□□□□□ -1.03
SF1-207ENST00000413951 MRPL34Q9BQ48 92 aaKnown RBP8.58□□□□□ -1.04
SF1-207ENST00000413951 ATP5EP2Q5VTU8 51 aa8.57□□□□□ -1.04
SF1-207ENST00000413951 J3QR89 54 aa8.55□□□□□ -1.04
SF1-207ENST00000413951 CASC2Q6XLA1 102 aa8.53□□□□□ -1.04
SF1-207ENST00000413951 ZCCHC13Q8WW36 166 aaKnown RBP8.53□□□□□ -1.04
SF1-207ENST00000413951 HCG22E2RYF7 251 aa8.52□□□□□ -1.05
SF1-207ENST00000413951 LINC00643Q86TS7 51 aa8.52□□□□□ -1.05
SF1-207ENST00000413951 WFDC13Q8IUB5 93 aa8.52□□□□□ -1.05
SF1-207ENST00000413951 FAM236DA0A1B0GTK5 79 aa8.46□□□□□ -1.06
SF1-207ENST00000413951 FAM236CP0DP71 79 aa8.46□□□□□ -1.06
SF1-207ENST00000413951 RBM12B-AS1Q9P1G2 102 aa8.45□□□□□ -1.06
SF1-207ENST00000413951 KRTAP9-8Q9BYQ0 159 aa8.44□□□□□ -1.06
SF1-207ENST00000413951 NDUFS5O43920 106 aa8.43□□□□□ -1.06
SF1-207ENST00000413951 K7ERU9 68 aa8.41□□□□□ -1.06
SF1-207ENST00000413951 HIST1H4AP62805 103 aaKnown RBP8.38□□□□□ -1.07
SF1-207ENST00000413951 Q5W150 140 aa8.38□□□□□ -1.07
SF1-207ENST00000413951 HRES1P13985 223 aa8.37□□□□□ -1.07
SF1-207ENST00000413951 SPINK7P58062 85 aa8.37□□□□□ -1.07
SF1-207ENST00000413951 MPLKIPQ8TAP9 179 aa8.37□□□□□ -1.07
SF1-207ENST00000413951 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.35□□□□□ -1.07
SF1-207ENST00000413951 TP53AIP1Q9HCN2 124 aa8.35□□□□□ -1.07
SF1-207ENST00000413951 A0A087WVE0 104 aa8.34□□□□□ -1.07
SF1-207ENST00000413951 KRTAP9-7A8MTY7 169 aa8.33□□□□□ -1.08
SF1-207ENST00000413951 MT2AP02795 61 aa8.3□□□□□ -1.08
SF1-207ENST00000413951 USH2AO75445 5202 aa8.28□□□□□ -1.08
SF1-207ENST00000413951 KRTAP10-10P60014 251 aa8.26□□□□□ -1.09
SF1-207ENST00000413951 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
SF1-207ENST00000413951 SSPOA2VEC9 5147 aa8.26□□□□□ -1.09
SF1-207ENST00000413951 IMUPQ9GZP8 106 aa8.25□□□□□ -1.09
SF1-207ENST00000413951 IGKV2D-30A0A075B6S6 120 aa8.24□□□□□ -1.09
SF1-207ENST00000413951 MT-ATP8P03928 68 aa8.24□□□□□ -1.09
SF1-207ENST00000413951 IGKV2-30P06310 120 aa8.24□□□□□ -1.09
SF1-207ENST00000413951 MT1FP04733 61 aa8.22□□□□□ -1.09
SF1-207ENST00000413951 TRAV22A0A0B4J277 110 aa8.21□□□□□ -1.1
SF1-207ENST00000413951 UQCRQO14949 82 aa8.21□□□□□ -1.1
SF1-207ENST00000413951 KRTAP9-3Q9BYQ3 159 aa8.19□□□□□ -1.1
SF1-207ENST00000413951 OCR1Q9BZK8 76 aa8.19□□□□□ -1.1
SF1-207ENST00000413951 LCE2BO14633 110 aa8.17□□□□□ -1.1
SF1-207ENST00000413951 KRTAP19-1Q8IUB9 90 aa8.16□□□□□ -1.1
SF1-207ENST00000413951 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
SF1-207ENST00000413951 ATOX1O00244 68 aa8.13□□□□□ -1.11
SF1-207ENST00000413951 CYP4F30PQ9H0H9 118 aa8.12□□□□□ -1.11
SF1-207ENST00000413951 FCGBPQ9Y6R7 5405 aaPredicted RBP8.11□□□□□ -1.11
SF1-207ENST00000413951 H0Y9P7 68 aa8.11□□□□□ -1.11
SF1-207ENST00000413951 SCGB1A1P11684 91 aa8.08□□□□□ -1.12
SF1-207ENST00000413951 FAM236AA0A1B0GUQ0 79 aa8.07□□□□□ -1.12
SF1-207ENST00000413951 FAM236BA0A1B0GV22 79 aa8.07□□□□□ -1.12
SF1-207ENST00000413951 C4orf26Q17RF5 130 aa8.07□□□□□ -1.12
SF1-207ENST00000413951 MACF1Q9UPN3 7388 aaKnown RBP8.06□□□□□ -1.12
SF1-207ENST00000413951 C5orf47Q569G3 176 aa8.06□□□□□ -1.12
SF1-207ENST00000413951 MP68P56378 58 aa8.03□□□□□ -1.12
SF1-207ENST00000413951 H1FX-AS1Q4G0G2 97 aa8.03□□□□□ -1.12
SF1-207ENST00000413951 C1orf64Q8NEQ6 169 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms