RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 DSCR10P59022 87 aa9.93□□□□□ -0.82
TRIM56-202ENST00000412507 ETDBQ3ZM63 59 aa9.93□□□□□ -0.82
TRIM56-202ENST00000412507 ATP11AUNQ6ZP68 121 aa9.93□□□□□ -0.82
TRIM56-202ENST00000412507 LOC110117498A0A087WWA1 95 aa9.92□□□□□ -0.82
TRIM56-202ENST00000412507 C14orf132Q9NPU4 83 aa9.92□□□□□ -0.82
TRIM56-202ENST00000412507 DEFB116Q30KQ4 102 aa9.91□□□□□ -0.82
TRIM56-202ENST00000412507 LINC00472Q9H8W2 130 aa9.9□□□□□ -0.82
TRIM56-202ENST00000412507 C20orf166-AS1Q96NR2 134 aa9.89□□□□□ -0.83
TRIM56-202ENST00000412507 A8MUU9 505 aa9.88□□□□□ -0.83
TRIM56-202ENST00000412507 Q6ZQT0 140 aa9.88□□□□□ -0.83
TRIM56-202ENST00000412507 A0A1B0GW54 56 aa9.85□□□□□ -0.83
TRIM56-202ENST00000412507 LINC00313P59037 77 aa9.85□□□□□ -0.83
TRIM56-202ENST00000412507 MT1HP80294 61 aa9.84□□□□□ -0.83
TRIM56-202ENST00000412507 NOTCH2NLQ7Z3S9 236 aa9.82□□□□□ -0.84
TRIM56-202ENST00000412507 COX6B2Q6YFQ2 88 aa9.81□□□□□ -0.84
TRIM56-202ENST00000412507 IGHV6-1A0A0B4J1U7 121 aa9.8□□□□□ -0.84
TRIM56-202ENST00000412507 KRTAP16-1A8MUX0 517 aa9.8□□□□□ -0.84
TRIM56-202ENST00000412507 KRTAP9-6A0A140TA67 174 aa9.79□□□□□ -0.84
TRIM56-202ENST00000412507 J3QR89 54 aa9.77□□□□□ -0.85
TRIM56-202ENST00000412507 A0A1B0GVX0 72 aa9.75□□□□□ -0.85
TRIM56-202ENST00000412507 FLGP20930 4061 aaPredicted RBP9.74□□□□□ -0.85
TRIM56-202ENST00000412507 ACYP1P07311 99 aa9.73□□□□□ -0.85
TRIM56-202ENST00000412507 FAM240AA0A1B0GVK7 77 aa9.72□□□□□ -0.85
TRIM56-202ENST00000412507 C8orf87E5RJ46 101 aa9.72□□□□□ -0.85
TRIM56-202ENST00000412507 J3KT08 172 aa9.72□□□□□ -0.85
TRIM56-202ENST00000412507 M0R2T5 61 aa9.68□□□□□ -0.86
TRIM56-202ENST00000412507 NREPQ16612 68 aa9.67□□□□□ -0.86
TRIM56-202ENST00000412507 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
TRIM56-202ENST00000412507 K7ERU9 68 aa9.66□□□□□ -0.86
TRIM56-202ENST00000412507 NDUFB1O75438 58 aa9.65□□□□□ -0.86
TRIM56-202ENST00000412507 LINC00846Q9NV44 126 aa9.65□□□□□ -0.86
TRIM56-202ENST00000412507 KRTAP10-6P60371 365 aaPredicted RBP9.64□□□□□ -0.87
TRIM56-202ENST00000412507 A8MWP4 228 aa9.62□□□□□ -0.87
TRIM56-202ENST00000412507 LORP23490 312 aaPredicted RBP9.62□□□□□ -0.87
TRIM56-202ENST00000412507 Q6ZVQ6 151 aa9.61□□□□□ -0.87
TRIM56-202ENST00000412507 IGKV3D-7A0A0C4DH55 119 aa9.6□□□□□ -0.87
TRIM56-202ENST00000412507 LCE2DQ5TA82 110 aaPredicted RBP9.6□□□□□ -0.87
TRIM56-202ENST00000412507 C8orf17Q9NRJ1 99 aa9.59□□□□□ -0.87
TRIM56-202ENST00000412507 BPY2O14599 106 aa9.55□□□□□ -0.88
TRIM56-202ENST00000412507 ZCCHC13Q8WW36 166 aaKnown RBP9.55□□□□□ -0.88
TRIM56-202ENST00000412507 Q8N9P0 234 aaPredicted RBP9.54□□□□□ -0.88
TRIM56-202ENST00000412507 HRES1P13985 223 aa9.53□□□□□ -0.88
TRIM56-202ENST00000412507 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
TRIM56-202ENST00000412507 ATP5EP2Q5VTU8 51 aa9.51□□□□□ -0.89
TRIM56-202ENST00000412507 LINC00643Q86TS7 51 aa9.51□□□□□ -0.89
TRIM56-202ENST00000412507 FAM236DA0A1B0GTK5 79 aa9.5□□□□□ -0.89
TRIM56-202ENST00000412507 FAM236CP0DP71 79 aa9.5□□□□□ -0.89
TRIM56-202ENST00000412507 CXCL6P80162 114 aa9.5□□□□□ -0.89
TRIM56-202ENST00000412507 MPLKIPQ8TAP9 179 aa9.49□□□□□ -0.89
TRIM56-202ENST00000412507 MMP24-AS1A0A0U1RRL7 71 aa9.48□□□□□ -0.89
TRIM56-202ENST00000412507 RBM12B-AS1Q9P1G2 102 aa9.48□□□□□ -0.89
TRIM56-202ENST00000412507 K7EQZ3 153 aa9.47□□□□□ -0.89
TRIM56-202ENST00000412507 SPINK7P58062 85 aa9.44□□□□□ -0.9
TRIM56-202ENST00000412507 TMEM254Q8TBM7 123 aa9.44□□□□□ -0.9
TRIM56-202ENST00000412507 MRPL34Q9BQ48 92 aaKnown RBP9.43□□□□□ -0.9
TRIM56-202ENST00000412507 hDV103S1A0JD37 113 aa9.41□□□□□ -0.9
TRIM56-202ENST00000412507 NDUFS5O43920 106 aa9.36□□□□□ -0.91
TRIM56-202ENST00000412507 Q8N9L7 120 aa9.36□□□□□ -0.91
TRIM56-202ENST00000412507 FSIP2Q5CZC0 6907 aa9.35□□□□□ -0.91
TRIM56-202ENST00000412507 HIST1H4AP62805 103 aaKnown RBP9.33□□□□□ -0.92
TRIM56-202ENST00000412507 WFDC13Q8IUB5 93 aa9.33□□□□□ -0.92
TRIM56-202ENST00000412507 KRTAP9-8Q9BYQ0 159 aa9.33□□□□□ -0.92
TRIM56-202ENST00000412507 IMUPQ9GZP8 106 aa9.31□□□□□ -0.92
TRIM56-202ENST00000412507 CRCT1Q9UGL9 99 aa9.31□□□□□ -0.92
TRIM56-202ENST00000412507 HCG22E2RYF7 251 aa9.29□□□□□ -0.92
TRIM56-202ENST00000412507 CASC2Q6XLA1 102 aa9.29□□□□□ -0.92
TRIM56-202ENST00000412507 MT-ATP8P03928 68 aa9.28□□□□□ -0.92
TRIM56-202ENST00000412507 Q5W150 140 aa9.25□□□□□ -0.93
TRIM56-202ENST00000412507 MT2AP02795 61 aa9.22□□□□□ -0.93
TRIM56-202ENST00000412507 IGKV2D-30A0A075B6S6 120 aa9.21□□□□□ -0.94
TRIM56-202ENST00000412507 A0A087WVE0 104 aa9.21□□□□□ -0.94
TRIM56-202ENST00000412507 IGKV2-30P06310 120 aa9.21□□□□□ -0.94
TRIM56-202ENST00000412507 C7orf65Q6ZTY9 151 aa9.16□□□□□ -0.94
TRIM56-202ENST00000412507 MT1FP04733 61 aa9.15□□□□□ -0.94
TRIM56-202ENST00000412507 KRTAP10-10P60014 251 aa9.11□□□□□ -0.95
TRIM56-202ENST00000412507 TP53AIP1Q9HCN2 124 aa9.11□□□□□ -0.95
TRIM56-202ENST00000412507 SCGB1A1P11684 91 aa9.1□□□□□ -0.95
TRIM56-202ENST00000412507 H1FX-AS1Q4G0G2 97 aa9.1□□□□□ -0.95
TRIM56-202ENST00000412507 USH2AO75445 5202 aa9.08□□□□□ -0.96
TRIM56-202ENST00000412507 FAM236AA0A1B0GUQ0 79 aa9.08□□□□□ -0.96
TRIM56-202ENST00000412507 FAM236BA0A1B0GV22 79 aa9.08□□□□□ -0.96
TRIM56-202ENST00000412507 C4orf26Q17RF5 130 aa9.03□□□□□ -0.96
TRIM56-202ENST00000412507 SMIM20Q8N5G0 67 aa9.03□□□□□ -0.96
TRIM56-202ENST00000412507 KRTAP9-3Q9BYQ3 159 aa9.03□□□□□ -0.96
TRIM56-202ENST00000412507 UQCRQO14949 82 aa9.02□□□□□ -0.97
TRIM56-202ENST00000412507 ATOX1O00244 68 aa9.01□□□□□ -0.97
TRIM56-202ENST00000412507 OCR1Q9BZK8 76 aa8.99□□□□□ -0.97
TRIM56-202ENST00000412507 SSPOA2VEC9 5147 aa8.98□□□□□ -0.97
TRIM56-202ENST00000412507 LCE2BO14633 110 aa8.98□□□□□ -0.97
TRIM56-202ENST00000412507 TRAV22A0A0B4J277 110 aa8.95□□□□□ -0.98
TRIM56-202ENST00000412507 TRAV7A0A075B6U4 112 aa8.93□□□□□ -0.98
TRIM56-202ENST00000412507 C5orf47Q569G3 176 aa8.92□□□□□ -0.98
TRIM56-202ENST00000412507 MP68P56378 58 aa8.91□□□□□ -0.98
TRIM56-202ENST00000412507 KRTAP3-1Q9BYR8 98 aa8.9□□□□□ -0.98
TRIM56-202ENST00000412507 H0Y9P7 68 aa8.89□□□□□ -0.99
TRIM56-202ENST00000412507 C1orf64Q8NEQ6 169 aa8.87□□□□□ -0.99
TRIM56-202ENST00000412507 H3BPC8 53 aa8.86□□□□□ -0.99
TRIM56-202ENST00000412507 SERP2Q8N6R1 65 aa8.86□□□□□ -0.99
TRIM56-202ENST00000412507 LOC101927531A0A1B0GV80 90 aa8.85□□□□□ -0.99
TRIM56-202ENST00000412507 CYP4F30PQ9H0H9 118 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms