RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 MUC17Q685J3 4493 aa-0.58□□□□□ -2.5
HDAC9-205ENST00000411993 COL6A5A8TX70 2615 aa-0.59□□□□□ -2.5
HDAC9-205ENST00000411993 MED14O60244 1454 aa-0.59□□□□□ -2.5
HDAC9-205ENST00000411993 CCDC18Q5T9S5 1454 aa-0.59□□□□□ -2.5
HDAC9-205ENST00000411993 WDR87Q6ZQQ6 2873 aa-0.59□□□□□ -2.5
HDAC9-205ENST00000411993 CRIP1P50238 77 aa-0.59□□□□□ -2.5
HDAC9-205ENST00000411993 KCNQ1DNQ9H478 68 aa-0.59□□□□□ -2.5
HDAC9-205ENST00000411993 KALRNO60229 2985 aa-0.59□□□□□ -2.5
HDAC9-205ENST00000411993 ANK3Q12955 4377 aaKnown RBP-0.59□□□□□ -2.5
HDAC9-205ENST00000411993 ERVK-7P63135 1459 aa-0.6□□□□□ -2.5
HDAC9-205ENST00000411993 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.6□□□□□ -2.51
HDAC9-205ENST00000411993 AKAP9Q99996 3911 aa-0.6□□□□□ -2.51
HDAC9-205ENST00000411993 RNF17Q9BXT8 1623 aaKnown RBP-0.6□□□□□ -2.51
HDAC9-205ENST00000411993 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.6□□□□□ -2.51
HDAC9-205ENST00000411993 NRAPQ86VF7 1730 aa-0.61□□□□□ -2.51
HDAC9-205ENST00000411993 PARP4Q9UKK3 1724 aaKnown RBP-0.61□□□□□ -2.51
HDAC9-205ENST00000411993 SMARCA2P51531 1590 aa-0.61□□□□□ -2.51
HDAC9-205ENST00000411993 CFAP74Q9C0B2 1584 aa-0.61□□□□□ -2.51
HDAC9-205ENST00000411993 WT1-ASQ06250 92 aa-0.61□□□□□ -2.51
HDAC9-205ENST00000411993 ENHOQ6UWT2 76 aa-0.61□□□□□ -2.51
HDAC9-205ENST00000411993 DNAH3Q8TD57 4116 aa-0.61□□□□□ -2.51
HDAC9-205ENST00000411993 ITSN2Q9NZM3 1697 aa-0.62□□□□□ -2.51
HDAC9-205ENST00000411993 VPS13BQ7Z7G8 4022 aa-0.62□□□□□ -2.51
HDAC9-205ENST00000411993 LMTK2Q8IWU2 1503 aa-0.62□□□□□ -2.51
HDAC9-205ENST00000411993 H3BVH4 76 aa-0.62□□□□□ -2.51
HDAC9-205ENST00000411993 MINOS1Q5TGZ0 78 aa-0.62□□□□□ -2.51
HDAC9-205ENST00000411993 C18orf32Q8TCD1 76 aa-0.62□□□□□ -2.51
HDAC9-205ENST00000411993 TOGARAM1Q9Y4F4 1720 aa-0.62□□□□□ -2.51
HDAC9-205ENST00000411993 CD163L1Q9NR16 1453 aa-0.62□□□□□ -2.51
HDAC9-205ENST00000411993 INO80Q9ULG1 1556 aaPredicted RBP-0.62□□□□□ -2.51
HDAC9-205ENST00000411993 VPS13DQ5THJ4 4388 aa-0.62□□□□□ -2.51
HDAC9-205ENST00000411993 ETDCA0A1B0GVM5 59 aa-0.63□□□□□ -2.51
HDAC9-205ENST00000411993 DEFB1P60022 68 aa-0.63□□□□□ -2.51
HDAC9-205ENST00000411993 ANKARQ7Z5J8 1434 aa-0.64□□□□□ -2.51
HDAC9-205ENST00000411993 APOBP04114 4563 aaKnown RBP-0.64□□□□□ -2.51
HDAC9-205ENST00000411993 LAMA3Q16787 3333 aa-0.64□□□□□ -2.51
HDAC9-205ENST00000411993 KIF1AQ12756 1690 aa-0.64□□□□□ -2.51
HDAC9-205ENST00000411993 DNAH11Q96DT5 4516 aa-0.64□□□□□ -2.51
HDAC9-205ENST00000411993 RPS27P42677 84 aaKnown RBP-0.64□□□□□ -2.51
HDAC9-205ENST00000411993 MT1HP80294 61 aa-0.64□□□□□ -2.51
HDAC9-205ENST00000411993 KRTAP19-6Q3LI70 58 aa-0.64□□□□□ -2.51
HDAC9-205ENST00000411993 RPS27LQ71UM5 84 aaKnown RBP-0.64□□□□□ -2.51
HDAC9-205ENST00000411993 NHSQ6T4R5 1651 aa-0.65□□□□□ -2.51
HDAC9-205ENST00000411993 LRRIQ1Q96JM4 1722 aa-0.65□□□□□ -2.51
HDAC9-205ENST00000411993 TEX15Q9BXT5 2789 aa-0.65□□□□□ -2.51
HDAC9-205ENST00000411993 TLN2Q9Y4G6 2542 aa-0.66□□□□□ -2.51
HDAC9-205ENST00000411993 RIF1Q5UIP0 2472 aaKnown RBP-0.66□□□□□ -2.51
HDAC9-205ENST00000411993 IGLV5-48A0A075B6I7 105 aa-0.66□□□□□ -2.52
HDAC9-205ENST00000411993 MMP24-AS1A0A0U1RRL7 71 aa-0.66□□□□□ -2.52
HDAC9-205ENST00000411993 FCER1GP30273 86 aa-0.66□□□□□ -2.52
HDAC9-205ENST00000411993 KRTAP19-5Q3LI72 72 aa-0.66□□□□□ -2.52
HDAC9-205ENST00000411993 C6orf48Q9UBA6 75 aa-0.66□□□□□ -2.52
HDAC9-205ENST00000411993 H3BUA1 57 aa-0.67□□□□□ -2.52
HDAC9-205ENST00000411993 TNP1P09430 55 aa-0.67□□□□□ -2.52
HDAC9-205ENST00000411993 RRBP1Q9P2E9 1410 aaKnown RBP-0.67□□□□□ -2.52
HDAC9-205ENST00000411993 ABCA8O94911 1581 aa-0.67□□□□□ -2.52
HDAC9-205ENST00000411993 MYO15AQ9UKN7 3530 aa-0.68□□□□□ -2.52
HDAC9-205ENST00000411993 DNAH7Q8WXX0 4024 aa-0.68□□□□□ -2.52
HDAC9-205ENST00000411993 SFTA3P0C7M3 94 aa-0.68□□□□□ -2.52
HDAC9-205ENST00000411993 CLPSL2Q6UWE3 100 aa-0.68□□□□□ -2.52
HDAC9-205ENST00000411993 USP9XQ93008 2570 aaPredicted RBP-0.68□□□□□ -2.52
HDAC9-205ENST00000411993 LY75O60449 1722 aa-0.69□□□□□ -2.52
HDAC9-205ENST00000411993 MYO5CQ9NQX4 1742 aa-0.69□□□□□ -2.52
HDAC9-205ENST00000411993 DIP2AQ14689 1571 aa-0.69□□□□□ -2.52
HDAC9-205ENST00000411993 A0A0C4DFX4 3053 aa-0.69□□□□□ -2.52
HDAC9-205ENST00000411993 ATXN8Q156A1 80 aa-0.69□□□□□ -2.52
HDAC9-205ENST00000411993 DEFB114Q30KQ6 69 aa-0.69□□□□□ -2.52
HDAC9-205ENST00000411993 NCBP2-AS2Q69YL0 99 aa-0.69□□□□□ -2.52
HDAC9-205ENST00000411993 NOP10Q9NPE3 64 aaKnown RBP-0.69□□□□□ -2.52
HDAC9-205ENST00000411993 NIPBLQ6KC79 2804 aaeCLIP-0.69□□□□□ -2.52
HDAC9-205ENST00000411993 ABCC6O95255 1503 aa-0.69□□□□□ -2.52
HDAC9-205ENST00000411993 HILPDAQ9Y5L2 63 aa-0.7□□□□□ -2.52
HDAC9-205ENST00000411993 TRIOO75962 3097 aa-0.7□□□□□ -2.52
HDAC9-205ENST00000411993 SACSQ9NZJ4 4579 aa-0.7□□□□□ -2.52
HDAC9-205ENST00000411993 CDC42BPGQ6DT37 1551 aa-0.7□□□□□ -2.52
HDAC9-205ENST00000411993 DNAH2Q9P225 4427 aa-0.71□□□□□ -2.52
HDAC9-205ENST00000411993 MROH1Q8NDA8 1641 aa-0.71□□□□□ -2.52
HDAC9-205ENST00000411993 C3P01024 1663 aa-0.71□□□□□ -2.52
HDAC9-205ENST00000411993 GNG13Q9P2W3 67 aa-0.71□□□□□ -2.52
HDAC9-205ENST00000411993 DNAH1Q9P2D7 4330 aa-0.71□□□□□ -2.52
HDAC9-205ENST00000411993 RANBP2P49792 3224 aaKnown RBP-0.71□□□□□ -2.52
HDAC9-205ENST00000411993 PLECQ15149 4684 aaKnown RBP-0.71□□□□□ -2.52
HDAC9-205ENST00000411993 DNMBPQ6XZF7 1577 aa-0.71□□□□□ -2.52
HDAC9-205ENST00000411993 SMR3BP02814 79 aaPredicted RBP-0.72□□□□□ -2.52
HDAC9-205ENST00000411993 CDC42BPAQ5VT25 1732 aa-0.72□□□□□ -2.53
HDAC9-205ENST00000411993 ITPR1Q14643 2758 aa-0.73□□□□□ -2.53
HDAC9-205ENST00000411993 C5orf42Q9H799 3197 aa-0.73□□□□□ -2.53
HDAC9-205ENST00000411993 IQGAP3Q86VI3 1631 aa-0.74□□□□□ -2.53
HDAC9-205ENST00000411993 KRTAP8-1Q8IUC2 63 aa-0.74□□□□□ -2.53
HDAC9-205ENST00000411993 DYNC1H1Q14204 4646 aaKnown RBP-0.74□□□□□ -2.53
HDAC9-205ENST00000411993 BPTFQ12830 3046 aa-0.74□□□□□ -2.53
HDAC9-205ENST00000411993 DNAH8Q96JB1 4490 aa-0.74□□□□□ -2.53
HDAC9-205ENST00000411993 ASXL1Q8IXJ9 1541 aa-0.74□□□□□ -2.53
HDAC9-205ENST00000411993 ABCA9Q8IUA7 1624 aa-0.75□□□□□ -2.53
HDAC9-205ENST00000411993 FRYQ5TBA9 3013 aa-0.75□□□□□ -2.53
HDAC9-205ENST00000411993 CLASP1Q7Z460 1538 aa-0.75□□□□□ -2.53
HDAC9-205ENST00000411993 UGGT2Q9NYU1 1516 aa-0.75□□□□□ -2.53
HDAC9-205ENST00000411993 DNAH5Q8TE73 4624 aa-0.76□□□□□ -2.53
HDAC9-205ENST00000411993 M0QY20 66 aa-0.76□□□□□ -2.53
HDAC9-205ENST00000411993 MT1XP80297 61 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms