RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 GINS2Q9Y248 185 aa-3.3□□□□□ -2.94
RNU4-88P-201ENST00000411220 CEP162Q5TB80 1403 aa-3.3□□□□□ -2.94
RNU4-88P-201ENST00000411220 DCAF1Q9Y4B6 1507 aa-3.3□□□□□ -2.94
RNU4-88P-201ENST00000411220 TRPC5OSA6NMA1 111 aa-3.31□□□□□ -2.94
RNU4-88P-201ENST00000411220 UMAD1C9J7I0 102 aa-3.31□□□□□ -2.94
RNU4-88P-201ENST00000411220 M0R129 80 aa-3.31□□□□□ -2.94
RNU4-88P-201ENST00000411220 DAOAP59103 153 aa-3.31□□□□□ -2.94
RNU4-88P-201ENST00000411220 CKS1BP61024 79 aa-3.31□□□□□ -2.94
RNU4-88P-201ENST00000411220 GON7Q9BXV9 100 aa-3.31□□□□□ -2.94
RNU4-88P-201ENST00000411220 CALML5Q9NZT1 146 aa-3.31□□□□□ -2.94
RNU4-88P-201ENST00000411220 ADCY10Q96PN6 1610 aa-3.32□□□□□ -2.94
RNU4-88P-201ENST00000411220 C9orf84Q5VXU9 1444 aa-3.32□□□□□ -2.94
RNU4-88P-201ENST00000411220 TBCAO75347 108 aaKnown RBP-3.32□□□□□ -2.94
RNU4-88P-201ENST00000411220 ETDBQ3ZM63 59 aa-3.32□□□□□ -2.94
RNU4-88P-201ENST00000411220 TOMM7Q9P0U1 55 aa-3.32□□□□□ -2.94
RNU4-88P-201ENST00000411220 ABCC9O60706 1549 aa-3.33□□□□□ -2.94
RNU4-88P-201ENST00000411220 FABP12A6NFH5 140 aa-3.33□□□□□ -2.94
RNU4-88P-201ENST00000411220 CCDC70Q6NSX1 233 aa-3.33□□□□□ -2.94
RNU4-88P-201ENST00000411220 FAM24BQ8N5W8 94 aa-3.33□□□□□ -2.94
RNU4-88P-201ENST00000411220 KIAA1143Q96AT1 154 aaPredicted RBP-3.33□□□□□ -2.94
RNU4-88P-201ENST00000411220 HIGD1AQ9Y241 93 aa-3.33□□□□□ -2.94
RNU4-88P-201ENST00000411220 J3KRW8 73 aa-3.34□□□□□ -2.94
RNU4-88P-201ENST00000411220 PFDN6O15212 129 aa-3.34□□□□□ -2.94
RNU4-88P-201ENST00000411220 UQCRHP07919 91 aa-3.34□□□□□ -2.94
RNU4-88P-201ENST00000411220 G0S2P27469 103 aa-3.34□□□□□ -2.94
RNU4-88P-201ENST00000411220 NREPQ16612 68 aa-3.34□□□□□ -2.94
RNU4-88P-201ENST00000411220 TMEM97Q5BJF2 176 aa-3.34□□□□□ -2.94
RNU4-88P-201ENST00000411220 CLEC2AQ6UVW9 174 aa-3.34□□□□□ -2.94
RNU4-88P-201ENST00000411220 HDDC3Q8N4P3 179 aa-3.34□□□□□ -2.94
RNU4-88P-201ENST00000411220 LINC00308Q8TCZ7 52 aa-3.34□□□□□ -2.94
RNU4-88P-201ENST00000411220 RWDD1Q9H446 243 aaPredicted RBP-3.34□□□□□ -2.94
RNU4-88P-201ENST00000411220 HYPKQ9NX55 129 aa-3.34□□□□□ -2.94
RNU4-88P-201ENST00000411220 A0A096LPF7 62 aa-3.35□□□□□ -2.95
RNU4-88P-201ENST00000411220 FABP1P07148 127 aa-3.35□□□□□ -2.95
RNU4-88P-201ENST00000411220 S100A12P80511 92 aa-3.35□□□□□ -2.95
RNU4-88P-201ENST00000411220 SNHG12Q9BXW3 62 aa-3.35□□□□□ -2.95
RNU4-88P-201ENST00000411220 RERGLQ9H628 205 aa-3.35□□□□□ -2.95
RNU4-88P-201ENST00000411220 TMEM167BQ9NRX6 74 aa-3.35□□□□□ -2.95
RNU4-88P-201ENST00000411220 SSR3Q9UNL2 185 aa-3.35□□□□□ -2.95
RNU4-88P-201ENST00000411220 TMA7Q9Y2S6 64 aaKnown RBP-3.35□□□□□ -2.95
RNU4-88P-201ENST00000411220 PAEPP09466 180 aa-3.36□□□□□ -2.95
RNU4-88P-201ENST00000411220 RABIFP47224 123 aa-3.36□□□□□ -2.95
RNU4-88P-201ENST00000411220 NCS1P62166 190 aa-3.36□□□□□ -2.95
RNU4-88P-201ENST00000411220 GNG5P63218 68 aa-3.36□□□□□ -2.95
RNU4-88P-201ENST00000411220 SMCO1Q147U7 214 aa-3.36□□□□□ -2.95
RNU4-88P-201ENST00000411220 PTRHD1Q6GMV3 140 aaKnown RBP-3.36□□□□□ -2.95
RNU4-88P-201ENST00000411220 ZNF720Q7Z2F6 126 aa-3.36□□□□□ -2.95
RNU4-88P-201ENST00000411220 PPP3R2Q96LZ3 170 aa-3.36□□□□□ -2.95
RNU4-88P-201ENST00000411220 PCBD2Q9H0N5 130 aa-3.36□□□□□ -2.95
RNU4-88P-201ENST00000411220 URB2Q14146 1524 aaKnown RBP-3.36□□□□□ -2.95
RNU4-88P-201ENST00000411220 CCDC18Q5T9S5 1454 aa-3.36□□□□□ -2.95
RNU4-88P-201ENST00000411220 EFCAB6Q5THR3 1501 aa-3.37□□□□□ -2.95
RNU4-88P-201ENST00000411220 A0A1B0GV72 72 aa-3.37□□□□□ -2.95
RNU4-88P-201ENST00000411220 COPZ1P61923 177 aa-3.37□□□□□ -2.95
RNU4-88P-201ENST00000411220 ENHOQ6UWT2 76 aa-3.37□□□□□ -2.95
RNU4-88P-201ENST00000411220 CEP19Q96LK0 163 aa-3.37□□□□□ -2.95
RNU4-88P-201ENST00000411220 PKIBQ9C010 78 aa-3.37□□□□□ -2.95
RNU4-88P-201ENST00000411220 LYRM2Q9NU23 88 aaPredicted RBP-3.37□□□□□ -2.95
RNU4-88P-201ENST00000411220 MED31Q9Y3C7 131 aa-3.37□□□□□ -2.95
RNU4-88P-201ENST00000411220 AKAP12Q02952 1782 aa-3.38□□□□□ -2.95
RNU4-88P-201ENST00000411220 RNF103-CHMP3A0A140T963 221 aa-3.38□□□□□ -2.95
RNU4-88P-201ENST00000411220 A0A1B0GW15 77 aa-3.38□□□□□ -2.95
RNU4-88P-201ENST00000411220 H3BSH0 61 aa-3.38□□□□□ -2.95
RNU4-88P-201ENST00000411220 NDUFA1O15239 70 aa-3.38□□□□□ -2.95
RNU4-88P-201ENST00000411220 DEXIO95424 95 aa-3.38□□□□□ -2.95
RNU4-88P-201ENST00000411220 MT-ND4LP03901 98 aa-3.38□□□□□ -2.95
RNU4-88P-201ENST00000411220 HSPE1P61604 102 aaKnown RBP-3.38□□□□□ -2.95
RNU4-88P-201ENST00000411220 SELENOWP63302 87 aa-3.38□□□□□ -2.95
RNU4-88P-201ENST00000411220 DEFB114Q30KQ6 69 aa-3.38□□□□□ -2.95
RNU4-88P-201ENST00000411220 ABCA5Q8WWZ7 1642 aa-3.38□□□□□ -2.95
RNU4-88P-201ENST00000411220 SYCP2Q9BX26 1530 aa-3.39□□□□□ -2.95
RNU4-88P-201ENST00000411220 S100BP04271 92 aaPredicted RBP-3.39□□□□□ -2.95
RNU4-88P-201ENST00000411220 TMEM244Q5VVB8 128 aa-3.39□□□□□ -2.95
RNU4-88P-201ENST00000411220 C8orf59Q8N0T1 100 aaPredicted RBP-3.39□□□□□ -2.95
RNU4-88P-201ENST00000411220 LINC00470Q9BZP3 86 aa-3.39□□□□□ -2.95
RNU4-88P-201ENST00000411220 AGLP35573 1532 aa-3.39□□□□□ -2.95
RNU4-88P-201ENST00000411220 LSM10Q969L4 123 aaKnown RBP-3.4□□□□□ -2.95
RNU4-88P-201ENST00000411220 CCDC115Q96NT0 180 aa-3.4□□□□□ -2.95
RNU4-88P-201ENST00000411220 PMCHL2Q9BQD1 86 aa-3.4□□□□□ -2.95
RNU4-88P-201ENST00000411220 H3BUX3 64 aa-3.41□□□□□ -2.96
RNU4-88P-201ENST00000411220 HIST1H1EP10412 219 aaKnown RBP-3.41□□□□□ -2.96
RNU4-88P-201ENST00000411220 POLR2HP52434 150 aaKnown RBP-3.41□□□□□ -2.96
RNU4-88P-201ENST00000411220 FGFR1OP2Q9NVK5 253 aa-3.41□□□□□ -2.96
RNU4-88P-201ENST00000411220 BCAP31P51572 246 aa-3.42□□□□□ -2.96
RNU4-88P-201ENST00000411220 ATP5EP56381 51 aaPredicted RBP-3.42□□□□□ -2.96
RNU4-88P-201ENST00000411220 ATP5IP56385 69 aaPredicted RBP-3.42□□□□□ -2.96
RNU4-88P-201ENST00000411220 ANAPC15P60006 121 aa-3.42□□□□□ -2.96
RNU4-88P-201ENST00000411220 RPS25P62851 125 aaKnown RBP-3.42□□□□□ -2.96
RNU4-88P-201ENST00000411220 PEA15Q15121 130 aa-3.42□□□□□ -2.96
RNU4-88P-201ENST00000411220 PLEKHJ1Q9NW61 149 aa-3.42□□□□□ -2.96
RNU4-88P-201ENST00000411220 ABCA9Q8IUA7 1624 aa-3.42□□□□□ -2.96
RNU4-88P-201ENST00000411220 ATP7AQ04656 1500 aa-3.43□□□□□ -2.96
RNU4-88P-201ENST00000411220 PET100P0DJ07 73 aa-3.43□□□□□ -2.96
RNU4-88P-201ENST00000411220 KRTDAPP60985 99 aa-3.43□□□□□ -2.96
RNU4-88P-201ENST00000411220 M0QZ92 97 aa-3.44□□□□□ -2.96
RNU4-88P-201ENST00000411220 PDCD5O14737 125 aa-3.44□□□□□ -2.96
RNU4-88P-201ENST00000411220 CETN3O15182 167 aa-3.44□□□□□ -2.96
RNU4-88P-201ENST00000411220 COPS9Q8WXC6 57 aa-3.44□□□□□ -2.96
RNU4-88P-201ENST00000411220 IER3IP1Q9Y5U9 82 aa-3.44□□□□□ -2.96
RNU4-88P-201ENST00000411220 KTN1Q86UP2 1357 aaKnown RBP-3.44□□□□□ -2.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms