RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 NDUFB1O75438 58 aa-0.98□□□□□ -2.57
PMS1-203ENST00000409593 FAUP35544 74 aaKnown RBP-0.98□□□□□ -2.57
PMS1-203ENST00000409593 CFAP43Q8NDM7 1665 aa-0.99□□□□□ -2.57
PMS1-203ENST00000409593 PIK3C2BO00750 1634 aa-0.99□□□□□ -2.57
PMS1-203ENST00000409593 WT1-ASQ06250 92 aa-0.99□□□□□ -2.57
PMS1-203ENST00000409593 PEA15Q15121 130 aa-0.99□□□□□ -2.57
PMS1-203ENST00000409593 SMARCA2P51531 1590 aa-0.99□□□□□ -2.57
PMS1-203ENST00000409593 SMG1Q96Q15 3661 aaKnown RBP-0.99□□□□□ -2.57
PMS1-203ENST00000409593 DNAH10Q8IVF4 4471 aa-0.99□□□□□ -2.57
PMS1-203ENST00000409593 NRAPQ86VF7 1730 aa-1□□□□□ -2.57
PMS1-203ENST00000409593 LINC01546A6NGU7 62 aa-1□□□□□ -2.57
PMS1-203ENST00000409593 NDUFA4O00483 81 aa-1□□□□□ -2.57
PMS1-203ENST00000409593 SMIM11AP58511 58 aa-1□□□□□ -2.57
PMS1-203ENST00000409593 C2orf88Q9BSF0 95 aa-1□□□□□ -2.57
PMS1-203ENST00000409593 INO80Q9ULG1 1556 aaPredicted RBP-1□□□□□ -2.57
PMS1-203ENST00000409593 TLN1Q9Y490 2541 aaKnown RBP-1□□□□□ -2.57
PMS1-203ENST00000409593 ANKRD26Q9UPS8 1709 aa-1□□□□□ -2.57
PMS1-203ENST00000409593 MGAQ8IWI9 3026 aa-1□□□□□ -2.57
PMS1-203ENST00000409593 DEFB131BA0A096LNP1 70 aa-1□□□□□ -2.57
PMS1-203ENST00000409593 MYMXA0A1B0GTQ4 84 aa-1□□□□□ -2.57
PMS1-203ENST00000409593 EFCAB10A6NFE3 127 aa-1□□□□□ -2.57
PMS1-203ENST00000409593 LINC00032P0C843 101 aa-1□□□□□ -2.57
PMS1-203ENST00000409593 SARNPP82979 210 aaKnown RBP-1□□□□□ -2.57
PMS1-203ENST00000409593 RICTORQ6R327 1708 aa-1.01□□□□□ -2.57
PMS1-203ENST00000409593 C20orf202A1L168 122 aa-1.01□□□□□ -2.57
PMS1-203ENST00000409593 IFI27P40305 119 aaPredicted RBP-1.01□□□□□ -2.57
PMS1-203ENST00000409593 RPS27P42677 84 aaKnown RBP-1.01□□□□□ -2.57
PMS1-203ENST00000409593 S100A10P60903 97 aa-1.01□□□□□ -2.57
PMS1-203ENST00000409593 RPS27LQ71UM5 84 aaKnown RBP-1.01□□□□□ -2.57
PMS1-203ENST00000409593 NOP10Q9NPE3 64 aaKnown RBP-1.01□□□□□ -2.57
PMS1-203ENST00000409593 HFM1A2PYH4 1435 aa-1.01□□□□□ -2.57
PMS1-203ENST00000409593 TJP1Q07157 1748 aa-1.02□□□□□ -2.57
PMS1-203ENST00000409593 NHSQ6T4R5 1651 aa-1.02□□□□□ -2.57
PMS1-203ENST00000409593 UMAD1C9J7I0 102 aa-1.02□□□□□ -2.57
PMS1-203ENST00000409593 MRPL33O75394 65 aaKnown RBP-1.02□□□□□ -2.57
PMS1-203ENST00000409593 RABAC1Q9UI14 185 aa-1.02□□□□□ -2.57
PMS1-203ENST00000409593 MAP3K4Q9Y6R4 1608 aa-1.02□□□□□ -2.57
PMS1-203ENST00000409593 A0A1B0GUL6 1792 aa-1.02□□□□□ -2.57
PMS1-203ENST00000409593 LINC00587B1AMM8 73 aa-1.03□□□□□ -2.57
PMS1-203ENST00000409593 S100PP25815 95 aa-1.03□□□□□ -2.57
PMS1-203ENST00000409593 BVES-AS1Q5T3Y7 98 aa-1.03□□□□□ -2.57
PMS1-203ENST00000409593 ACBD7Q8N6N7 88 aa-1.03□□□□□ -2.57
PMS1-203ENST00000409593 DPY30Q9C005 99 aa-1.03□□□□□ -2.57
PMS1-203ENST00000409593 CNTLNQ9NXG0 1405 aa-1.03□□□□□ -2.57
PMS1-203ENST00000409593 ERVK-7P63135 1459 aa-1.03□□□□□ -2.57
PMS1-203ENST00000409593 ARHGAP35Q9NRY4 1499 aa-1.03□□□□□ -2.57
PMS1-203ENST00000409593 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.03□□□□□ -2.57
PMS1-203ENST00000409593 AKAP12Q02952 1782 aa-1.03□□□□□ -2.57
PMS1-203ENST00000409593 CEBPZOSA8MTT3 80 aa-1.04□□□□□ -2.58
PMS1-203ENST00000409593 H3BUA1 57 aa-1.04□□□□□ -2.58
PMS1-203ENST00000409593 DEFB4AO15263 64 aa-1.04□□□□□ -2.58
PMS1-203ENST00000409593 GYPAP02724 150 aa-1.04□□□□□ -2.58
PMS1-203ENST00000409593 NREPQ16612 68 aa-1.04□□□□□ -2.58
PMS1-203ENST00000409593 MINOS1Q5TGZ0 78 aa-1.04□□□□□ -2.58
PMS1-203ENST00000409593 KIF14Q15058 1648 aa-1.05□□□□□ -2.58
PMS1-203ENST00000409593 SPENQ96T58 3664 aaKnown RBP-1.05□□□□□ -2.58
PMS1-203ENST00000409593 M0QY20 66 aa-1.05□□□□□ -2.58
PMS1-203ENST00000409593 NCBP2-AS2Q69YL0 99 aa-1.05□□□□□ -2.58
PMS1-203ENST00000409593 C20orf78Q9BR46 151 aa-1.05□□□□□ -2.58
PMS1-203ENST00000409593 KCNQ1DNQ9H478 68 aa-1.05□□□□□ -2.58
PMS1-203ENST00000409593 MYO5CQ9NQX4 1742 aa-1.05□□□□□ -2.58
PMS1-203ENST00000409593 DMXL2Q8TDJ6 3036 aa-1.05□□□□□ -2.58
PMS1-203ENST00000409593 RALGAPBQ86X10 1494 aa-1.05□□□□□ -2.58
PMS1-203ENST00000409593 CD163L1Q9NR16 1453 aa-1.05□□□□□ -2.58
PMS1-203ENST00000409593 DNMBPQ6XZF7 1577 aa-1.05□□□□□ -2.58
PMS1-203ENST00000409593 M0QZ58 72 aa-1.06□□□□□ -2.58
PMS1-203ENST00000409593 RBP2P50120 134 aa-1.06□□□□□ -2.58
PMS1-203ENST00000409593 KDM5DQ9BY66 1539 aa-1.06□□□□□ -2.58
PMS1-203ENST00000409593 ADGRG4Q8IZF6 3080 aa-1.06□□□□□ -2.58
PMS1-203ENST00000409593 PVALEFA0A1B0GWK0 134 aa-1.07□□□□□ -2.58
PMS1-203ENST00000409593 HMGA1P17096 107 aaKnown RBP-1.07□□□□□ -2.58
PMS1-203ENST00000409593 SNRPFP62306 86 aaKnown RBP-1.07□□□□□ -2.58
PMS1-203ENST00000409593 ATP5EP2Q5VTU8 51 aa-1.07□□□□□ -2.58
PMS1-203ENST00000409593 LINC00643Q86TS7 51 aa-1.07□□□□□ -2.58
PMS1-203ENST00000409593 UBL5Q9BZL1 73 aa-1.07□□□□□ -2.58
PMS1-203ENST00000409593 ABCC3O15438 1527 aa-1.07□□□□□ -2.58
PMS1-203ENST00000409593 MED14O60244 1454 aa-1.07□□□□□ -2.58
PMS1-203ENST00000409593 FCER1GP30273 86 aa-1.07□□□□□ -2.58
PMS1-203ENST00000409593 C6orf48Q9UBA6 75 aa-1.07□□□□□ -2.58
PMS1-203ENST00000409593 PPLO60437 1756 aa-1.08□□□□□ -2.58
PMS1-203ENST00000409593 TTC37Q6PGP7 1564 aa-1.08□□□□□ -2.58
PMS1-203ENST00000409593 CRIP1P50238 77 aa-1.08□□□□□ -2.58
PMS1-203ENST00000409593 C14orf144Q96I85 54 aa-1.08□□□□□ -2.58
PMS1-203ENST00000409593 MROH1Q8NDA8 1641 aa-1.08□□□□□ -2.58
PMS1-203ENST00000409593 CLASP1Q7Z460 1538 aa-1.09□□□□□ -2.58
PMS1-203ENST00000409593 SFTA3P0C7M3 94 aa-1.09□□□□□ -2.58
PMS1-203ENST00000409593 NCMAPQ5T1S8 102 aa-1.09□□□□□ -2.58
PMS1-203ENST00000409593 TCEAL7Q9BRU2 100 aa-1.09□□□□□ -2.58
PMS1-203ENST00000409593 C3P01024 1663 aa-1.09□□□□□ -2.58
PMS1-203ENST00000409593 DIP2AQ14689 1571 aa-1.09□□□□□ -2.58
PMS1-203ENST00000409593 A8MTW9 85 aa-1.1□□□□□ -2.58
PMS1-203ENST00000409593 MT1FP04733 61 aa-1.1□□□□□ -2.58
PMS1-203ENST00000409593 PREX2Q70Z35 1606 aa-1.1□□□□□ -2.59
PMS1-203ENST00000409593 ASXL1Q8IXJ9 1541 aa-1.1□□□□□ -2.59
PMS1-203ENST00000409593 SPTBN5Q9NRC6 3674 aaKnown RBP-1.1□□□□□ -2.59
PMS1-203ENST00000409593 SPART-AS1P0CW21 52 aa-1.1□□□□□ -2.59
PMS1-203ENST00000409593 ATMQ13315 3056 aa-1.11□□□□□ -2.59
PMS1-203ENST00000409593 ETDCA0A1B0GVM5 59 aa-1.11□□□□□ -2.59
PMS1-203ENST00000409593 ATP6V1G2-DDX39BF2Z307 99 aa-1.11□□□□□ -2.59
PMS1-203ENST00000409593 FAM208AQ9UK61 1670 aaKnown RBP-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms