RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 LINC00313P59037 77 aa7.56□□□□□ -1.2
NIF3L1-205ENST00000409588 C21orf62-AS1Q17RA5 79 aa7.56□□□□□ -1.2
NIF3L1-205ENST00000409588 KRTAP10-6P60371 365 aaPredicted RBP7.55□□□□□ -1.2
NIF3L1-205ENST00000409588 CCKP06307 115 aa7.54□□□□□ -1.2
NIF3L1-205ENST00000409588 IGKV4-1P06312 121 aa7.54□□□□□ -1.2
NIF3L1-205ENST00000409588 TRBV20-1A0A075B6N2 111 aa7.53□□□□□ -1.2
NIF3L1-205ENST00000409588 RBM3P98179 157 aaKnown RBP7.53□□□□□ -1.2
NIF3L1-205ENST00000409588 SIGMAR1Q99720 223 aa7.53□□□□□ -1.2
NIF3L1-205ENST00000409588 DSCR8Q96T75 97 aa7.52□□□□□ -1.21
NIF3L1-205ENST00000409588 LINC00472Q9H8W2 130 aa7.52□□□□□ -1.21
NIF3L1-205ENST00000409588 DSCR10P59022 87 aa7.5□□□□□ -1.21
NIF3L1-205ENST00000409588 TMA7Q9Y2S6 64 aaKnown RBP7.49□□□□□ -1.21
NIF3L1-205ENST00000409588 A0A1B0GW54 56 aa7.47□□□□□ -1.21
NIF3L1-205ENST00000409588 BAALC-AS2P0C853 105 aa7.47□□□□□ -1.21
NIF3L1-205ENST00000409588 CRCT1Q9UGL9 99 aa7.47□□□□□ -1.21
NIF3L1-205ENST00000409588 FLGP20930 4061 aaPredicted RBP7.47□□□□□ -1.21
NIF3L1-205ENST00000409588 A0A1B0GV72 72 aa7.46□□□□□ -1.22
NIF3L1-205ENST00000409588 C9JAW5 83 aa7.46□□□□□ -1.22
NIF3L1-205ENST00000409588 J3KT08 172 aa7.46□□□□□ -1.22
NIF3L1-205ENST00000409588 M0R143 59 aa7.46□□□□□ -1.22
NIF3L1-205ENST00000409588 KRTAP16-1A8MUX0 517 aa7.45□□□□□ -1.22
NIF3L1-205ENST00000409588 C8orf87E5RJ46 101 aa7.45□□□□□ -1.22
NIF3L1-205ENST00000409588 FSIP2Q5CZC0 6907 aa7.45□□□□□ -1.22
NIF3L1-205ENST00000409588 JMJD7-PLA2G4BH0Y9G9 81 aa7.43□□□□□ -1.22
NIF3L1-205ENST00000409588 DEFB116Q30KQ4 102 aa7.43□□□□□ -1.22
NIF3L1-205ENST00000409588 VPS25Q9BRG1 176 aa7.43□□□□□ -1.22
NIF3L1-205ENST00000409588 IGHV6-1A0A0B4J1U7 121 aa7.42□□□□□ -1.22
NIF3L1-205ENST00000409588 PDE6GP18545 87 aa7.42□□□□□ -1.22
NIF3L1-205ENST00000409588 ATXN8Q156A1 80 aa7.42□□□□□ -1.22
NIF3L1-205ENST00000409588 A0A1B0GVX0 72 aa7.41□□□□□ -1.22
NIF3L1-205ENST00000409588 Q6ZQT0 140 aa7.4□□□□□ -1.22
NIF3L1-205ENST00000409588 NDUFB1O75438 58 aa7.39□□□□□ -1.23
NIF3L1-205ENST00000409588 NOTCH2NLQ7Z3S9 236 aa7.39□□□□□ -1.23
NIF3L1-205ENST00000409588 RBM12B-AS1Q9P1G2 102 aa7.39□□□□□ -1.23
NIF3L1-205ENST00000409588 LYRM7Q5U5X0 104 aa7.37□□□□□ -1.23
NIF3L1-205ENST00000409588 LOC110117498A0A087WWA1 95 aa7.36□□□□□ -1.23
NIF3L1-205ENST00000409588 SMIM6P0DI80 62 aa7.35□□□□□ -1.23
NIF3L1-205ENST00000409588 MTURNQ8N3F0 131 aa7.34□□□□□ -1.23
NIF3L1-205ENST00000409588 FAM236DA0A1B0GTK5 79 aa7.33□□□□□ -1.24
NIF3L1-205ENST00000409588 FAM236CP0DP71 79 aa7.33□□□□□ -1.24
NIF3L1-205ENST00000409588 MPLKIPQ8TAP9 179 aa7.33□□□□□ -1.24
NIF3L1-205ENST00000409588 A8MWP4 228 aa7.3□□□□□ -1.24
NIF3L1-205ENST00000409588 TSTD3H0UI37 97 aa7.3□□□□□ -1.24
NIF3L1-205ENST00000409588 HRES1P13985 223 aa7.3□□□□□ -1.24
NIF3L1-205ENST00000409588 Q8N9P0 234 aaPredicted RBP7.3□□□□□ -1.24
NIF3L1-205ENST00000409588 ZCCHC13Q8WW36 166 aaKnown RBP7.3□□□□□ -1.24
NIF3L1-205ENST00000409588 C9orf118A6NHY6 69 aa7.28□□□□□ -1.24
NIF3L1-205ENST00000409588 NAA38Q9BRA0 125 aaKnown RBP7.27□□□□□ -1.25
NIF3L1-205ENST00000409588 NREPQ16612 68 aa7.26□□□□□ -1.25
NIF3L1-205ENST00000409588 SPINK7P58062 85 aa7.25□□□□□ -1.25
NIF3L1-205ENST00000409588 C14orf132Q9NPU4 83 aa7.25□□□□□ -1.25
NIF3L1-205ENST00000409588 C8orf17Q9NRJ1 99 aa7.25□□□□□ -1.25
NIF3L1-205ENST00000409588 PRR15Q8IV56 129 aa7.23□□□□□ -1.25
NIF3L1-205ENST00000409588 IGKV3D-7A0A0C4DH55 119 aa7.22□□□□□ -1.25
NIF3L1-205ENST00000409588 Q6ZVQ6 151 aa7.22□□□□□ -1.25
NIF3L1-205ENST00000409588 H3BT86 120 aa7.21□□□□□ -1.26
NIF3L1-205ENST00000409588 BATFQ16520 125 aa7.19□□□□□ -1.26
NIF3L1-205ENST00000409588 TMEM254Q8TBM7 123 aa7.17□□□□□ -1.26
NIF3L1-205ENST00000409588 A0A1W2PPM0 123 aa7.16□□□□□ -1.26
NIF3L1-205ENST00000409588 MRPL34Q9BQ48 92 aaKnown RBP7.15□□□□□ -1.26
NIF3L1-205ENST00000409588 MT2AP02795 61 aa7.14□□□□□ -1.27
NIF3L1-205ENST00000409588 TAX1BP3O14907 124 aa7.13□□□□□ -1.27
NIF3L1-205ENST00000409588 hDV103S1A0JD37 113 aa7.12□□□□□ -1.27
NIF3L1-205ENST00000409588 WFDC13Q8IUB5 93 aa7.12□□□□□ -1.27
NIF3L1-205ENST00000409588 MMP24-AS1A0A0U1RRL7 71 aa7.11□□□□□ -1.27
NIF3L1-205ENST00000409588 BPY2O14599 106 aa7.11□□□□□ -1.27
NIF3L1-205ENST00000409588 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
NIF3L1-205ENST00000409588 LOC105371267A0A1B0GV96 52 aa7.09□□□□□ -1.27
NIF3L1-205ENST00000409588 K7EQZ3 153 aa7.08□□□□□ -1.28
NIF3L1-205ENST00000409588 MT1FP04733 61 aa7.07□□□□□ -1.28
NIF3L1-205ENST00000409588 NDUFS5O43920 106 aa7.06□□□□□ -1.28
NIF3L1-205ENST00000409588 USH2AO75445 5202 aa7.05□□□□□ -1.28
NIF3L1-205ENST00000409588 SPCS1Q9Y6A9 102 aa7.04□□□□□ -1.28
NIF3L1-205ENST00000409588 H1FX-AS1Q4G0G2 97 aa7.02□□□□□ -1.29
NIF3L1-205ENST00000409588 COL5A1-AS1Q5SY13 56 aa7□□□□□ -1.29
NIF3L1-205ENST00000409588 CASC2Q6XLA1 102 aa7□□□□□ -1.29
NIF3L1-205ENST00000409588 KRTAP15-1Q3LI76 137 aa6.99□□□□□ -1.29
NIF3L1-205ENST00000409588 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
NIF3L1-205ENST00000409588 UBL5Q9BZL1 73 aa6.99□□□□□ -1.29
NIF3L1-205ENST00000409588 CXCL6P80162 114 aa6.98□□□□□ -1.29
NIF3L1-205ENST00000409588 SSPOA2VEC9 5147 aa6.97□□□□□ -1.29
NIF3L1-205ENST00000409588 LINC00846Q9NV44 126 aa6.97□□□□□ -1.29
NIF3L1-205ENST00000409588 IGKV2D-30A0A075B6S6 120 aa6.95□□□□□ -1.3
NIF3L1-205ENST00000409588 IGKV2-30P06310 120 aa6.95□□□□□ -1.3
NIF3L1-205ENST00000409588 Q5W150 140 aa6.95□□□□□ -1.3
NIF3L1-205ENST00000409588 HCG22E2RYF7 251 aa6.94□□□□□ -1.3
NIF3L1-205ENST00000409588 K7EP34 96 aa6.92□□□□□ -1.3
NIF3L1-205ENST00000409588 Q8N9L7 120 aa6.92□□□□□ -1.3
NIF3L1-205ENST00000409588 PRO0461Q9UI25 63 aa6.92□□□□□ -1.3
NIF3L1-205ENST00000409588 GTF2H5Q6ZYL4 71 aa6.89□□□□□ -1.31
NIF3L1-205ENST00000409588 F8W1H4 67 aa6.88□□□□□ -1.31
NIF3L1-205ENST00000409588 TP53AIP1Q9HCN2 124 aa6.87□□□□□ -1.31
NIF3L1-205ENST00000409588 FCGBPQ9Y6R7 5405 aaPredicted RBP6.86□□□□□ -1.31
NIF3L1-205ENST00000409588 C4orf26Q17RF5 130 aa6.84□□□□□ -1.31
NIF3L1-205ENST00000409588 KRTAP19-6Q3LI70 58 aa6.82□□□□□ -1.32
NIF3L1-205ENST00000409588 ETDBQ3ZM63 59 aa6.77□□□□□ -1.33
NIF3L1-205ENST00000409588 CSAG1Q6PB30 78 aa6.75□□□□□ -1.33
NIF3L1-205ENST00000409588 C1orf64Q8NEQ6 169 aa6.75□□□□□ -1.33
NIF3L1-205ENST00000409588 ACYP1P07311 99 aa6.74□□□□□ -1.33
NIF3L1-205ENST00000409588 S4R3F8 94 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms