RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 ZNF861PO60384 105 aa3.45□□□□□ -1.86
R3HDM1-202ENST00000409478 STAB2Q8WWQ8 2551 aa3.45□□□□□ -1.86
R3HDM1-202ENST00000409478 FAM229AH3BQW9 127 aa3.44□□□□□ -1.86
R3HDM1-202ENST00000409478 KRTAP10-11P60412 298 aa3.43□□□□□ -1.86
R3HDM1-202ENST00000409478 C1orf134Q5TEV5 83 aa3.43□□□□□ -1.86
R3HDM1-202ENST00000409478 VWFP04275 2813 aa3.43□□□□□ -1.86
R3HDM1-202ENST00000409478 WWC2-AS2Q96NR7 200 aa3.42□□□□□ -1.86
R3HDM1-202ENST00000409478 IGLV7-43P04211 117 aa3.42□□□□□ -1.86
R3HDM1-202ENST00000409478 LY6G6CO95867 125 aa3.42□□□□□ -1.86
R3HDM1-202ENST00000409478 IGKV2-30P06310 120 aa3.42□□□□□ -1.86
R3HDM1-202ENST00000409478 PKD1L1Q8TDX9 2849 aa3.41□□□□□ -1.86
R3HDM1-202ENST00000409478 SPINK6Q6UWN8 80 aa3.41□□□□□ -1.86
R3HDM1-202ENST00000409478 ROMO1P60602 79 aa3.4□□□□□ -1.86
R3HDM1-202ENST00000409478 KRTAP25-1Q3LHN0 102 aa3.4□□□□□ -1.86
R3HDM1-202ENST00000409478 KRTAP1-5Q9BYS1 174 aa3.39□□□□□ -1.87
R3HDM1-202ENST00000409478 TGP01266 2768 aa3.38□□□□□ -1.87
R3HDM1-202ENST00000409478 TRRAPQ9Y4A5 3859 aa3.38□□□□□ -1.87
R3HDM1-202ENST00000409478 A8MUU9 505 aa3.37□□□□□ -1.87
R3HDM1-202ENST00000409478 SPACA4Q8TDM5 124 aa3.37□□□□□ -1.87
R3HDM1-202ENST00000409478 PANO1I0J062 215 aa3.36□□□□□ -1.87
R3HDM1-202ENST00000409478 IGKV2D-30A0A075B6S6 120 aa3.36□□□□□ -1.87
R3HDM1-202ENST00000409478 IGLV5-52A0A0A0MRZ9 124 aa3.35□□□□□ -1.87
R3HDM1-202ENST00000409478 SRRM2Q9UQ35 2752 aaKnown RBP3.35□□□□□ -1.87
R3HDM1-202ENST00000409478 ANK2Q01484 3957 aa3.35□□□□□ -1.87
R3HDM1-202ENST00000409478 NUPR2A6NF83 97 aa3.34□□□□□ -1.87
R3HDM1-202ENST00000409478 ANAPC11Q9NYG5 84 aa3.34□□□□□ -1.87
R3HDM1-202ENST00000409478 CSMD3Q7Z407 3707 aa3.34□□□□□ -1.87
R3HDM1-202ENST00000409478 LINC00304Q8N9R0 145 aa3.34□□□□□ -1.88
R3HDM1-202ENST00000409478 CIRBP-AS1Q8TBR5 109 aa3.34□□□□□ -1.88
R3HDM1-202ENST00000409478 PSORS1C2Q9UIG4 136 aa3.34□□□□□ -1.88
R3HDM1-202ENST00000409478 TENM3Q9P273 2699 aa3.33□□□□□ -1.88
R3HDM1-202ENST00000409478 SSBP3-AS1Q7Z2R9 100 aa3.33□□□□□ -1.88
R3HDM1-202ENST00000409478 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.33□□□□□ -1.88
R3HDM1-202ENST00000409478 KRTAP21-3Q3LHN1 58 aa3.33□□□□□ -1.88
R3HDM1-202ENST00000409478 LYSTQ99698 3801 aa3.32□□□□□ -1.88
R3HDM1-202ENST00000409478 H0YAA0 97 aa3.32□□□□□ -1.88
R3HDM1-202ENST00000409478 DNAH10Q8IVF4 4471 aa3.31□□□□□ -1.88
R3HDM1-202ENST00000409478 Q6ZSA8 131 aa3.31□□□□□ -1.88
R3HDM1-202ENST00000409478 KRTAP16-1A8MUX0 517 aa3.3□□□□□ -1.88
R3HDM1-202ENST00000409478 SPINK1P00995 79 aa3.3□□□□□ -1.88
R3HDM1-202ENST00000409478 K7ERS5 55 aa3.3□□□□□ -1.88
R3HDM1-202ENST00000409478 APLNQ9ULZ1 77 aa3.3□□□□□ -1.88
R3HDM1-202ENST00000409478 NBDYA0A0U1RRE5 68 aa3.29□□□□□ -1.88
R3HDM1-202ENST00000409478 A0A1B0GU33 70 aa3.29□□□□□ -1.88
R3HDM1-202ENST00000409478 Q6ZRN7 208 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-202ENST00000409478 P0C880 135 aa3.27□□□□□ -1.89
R3HDM1-202ENST00000409478 H1FX-AS1Q4G0G2 97 aa3.27□□□□□ -1.89
R3HDM1-202ENST00000409478 DNAH9Q9NYC9 4486 aa3.26□□□□□ -1.89
R3HDM1-202ENST00000409478 DNAH3Q8TD57 4116 aa3.26□□□□□ -1.89
R3HDM1-202ENST00000409478 Q8N1X5 172 aa3.25□□□□□ -1.89
R3HDM1-202ENST00000409478 A0A087WTM6 91 aa3.24□□□□□ -1.89
R3HDM1-202ENST00000409478 TYMSOSQ8TAI1 123 aa3.24□□□□□ -1.89
R3HDM1-202ENST00000409478 HUWE1Q7Z6Z7 4374 aaKnown RBP3.23□□□□□ -1.89
R3HDM1-202ENST00000409478 DNAH8Q96JB1 4490 aa3.22□□□□□ -1.89
R3HDM1-202ENST00000409478 CMYA5Q8N3K9 4069 aa3.22□□□□□ -1.89
R3HDM1-202ENST00000409478 SPINT4Q6UDR6 99 aa3.22□□□□□ -1.89
R3HDM1-202ENST00000409478 DMBT1Q9UGM3 2413 aaPredicted RBP3.21□□□□□ -1.9
R3HDM1-202ENST00000409478 CRIPTQ9P021 101 aa3.21□□□□□ -1.9
R3HDM1-202ENST00000409478 FRAS1Q86XX4 4008 aa3.2□□□□□ -1.9
R3HDM1-202ENST00000409478 KRTAP13-2Q52LG2 175 aa3.2□□□□□ -1.9
R3HDM1-202ENST00000409478 COL7A1Q02388 2944 aa3.19□□□□□ -1.9
R3HDM1-202ENST00000409478 FLG2Q5D862 2391 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-202ENST00000409478 DYNC2H1Q8NCM8 4307 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-202ENST00000409478 FBN3Q75N90 2809 aa3.17□□□□□ -1.9
R3HDM1-202ENST00000409478 COX6B2Q6YFQ2 88 aa3.17□□□□□ -1.9
R3HDM1-202ENST00000409478 SMR3BP02814 79 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-202ENST00000409478 C20orf166-AS1Q96NR2 134 aa3.16□□□□□ -1.9
R3HDM1-202ENST00000409478 RPL37P61927 97 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-202ENST00000409478 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
R3HDM1-202ENST00000409478 KRTAP15-1Q3LI76 137 aa3.15□□□□□ -1.91
R3HDM1-202ENST00000409478 HECTD4Q9Y4D8 3996 aa3.15□□□□□ -1.91
R3HDM1-202ENST00000409478 DNAH7Q8WXX0 4024 aa3.15□□□□□ -1.91
R3HDM1-202ENST00000409478 KRTAP3-1Q9BYR8 98 aa3.14□□□□□ -1.91
R3HDM1-202ENST00000409478 TPRXLQ17RH7 258 aa3.13□□□□□ -1.91
R3HDM1-202ENST00000409478 VPS13DQ5THJ4 4388 aa3.13□□□□□ -1.91
R3HDM1-202ENST00000409478 MEGF8Q7Z7M0 2845 aa3.13□□□□□ -1.91
R3HDM1-202ENST00000409478 DNAH17Q9UFH2 4485 aa3.12□□□□□ -1.91
R3HDM1-202ENST00000409478 RPS29P62273 56 aaKnown RBP3.12□□□□□ -1.91
R3HDM1-202ENST00000409478 KRTAP1-4P0C5Y4 121 aa3.11□□□□□ -1.91
R3HDM1-202ENST00000409478 PLECQ15149 4684 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-202ENST00000409478 DNHD1Q96M86 4753 aa3.09□□□□□ -1.92
R3HDM1-202ENST00000409478 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
R3HDM1-202ENST00000409478 C10orf95Q9H7T3 257 aa3.07□□□□□ -1.92
R3HDM1-202ENST00000409478 PRKDCP78527 4128 aaKnown RBP3.07□□□□□ -1.92
R3HDM1-202ENST00000409478 KRTAP10-2P60368 255 aa3.06□□□□□ -1.92
R3HDM1-202ENST00000409478 A0A0D9SG42 100 aa3.06□□□□□ -1.92
R3HDM1-202ENST00000409478 KRTAP10-6P60371 365 aaPredicted RBP3.06□□□□□ -1.92
R3HDM1-202ENST00000409478 KMT2AQ03164 3969 aa3.05□□□□□ -1.92
R3HDM1-202ENST00000409478 KRTAP13-4Q3LI77 160 aa3.04□□□□□ -1.92
R3HDM1-202ENST00000409478 LCE2DQ5TA82 110 aaPredicted RBP3.04□□□□□ -1.92
R3HDM1-202ENST00000409478 DNAH2Q9P225 4427 aa3.04□□□□□ -1.92
R3HDM1-202ENST00000409478 C9orf92A6NGG3 77 aa3.04□□□□□ -1.92
R3HDM1-202ENST00000409478 S4R3F8 94 aa3.03□□□□□ -1.92
R3HDM1-202ENST00000409478 DNAH11Q96DT5 4516 aa3.03□□□□□ -1.92
R3HDM1-202ENST00000409478 KRTAP10-1P60331 282 aa3.01□□□□□ -1.93
R3HDM1-202ENST00000409478 KRTAP3-3Q9BYR6 98 aa3.01□□□□□ -1.93
R3HDM1-202ENST00000409478 KRTAP3-2Q9BYR7 98 aa3.01□□□□□ -1.93
R3HDM1-202ENST00000409478 DNAH6Q9C0G6 4158 aa3.01□□□□□ -1.93
R3HDM1-202ENST00000409478 STARD9Q9P2P6 4700 aa2.99□□□□□ -1.93
R3HDM1-202ENST00000409478 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms