RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 LOC110117498A0A087WWA1 95 aa4.78□□□□□ -1.64
GPC3-203ENST00000406757 A0A087WSZ3 146 aa4.77□□□□□ -1.65
GPC3-203ENST00000406757 TRBV7-7A0A0K0K1E9 115 aa4.77□□□□□ -1.65
GPC3-203ENST00000406757 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
GPC3-203ENST00000406757 RETNLBQ9BQ08 111 aa4.77□□□□□ -1.65
GPC3-203ENST00000406757 SPAG11AQ6PDA7 123 aa4.76□□□□□ -1.65
GPC3-203ENST00000406757 SPINK1P00995 79 aa4.75□□□□□ -1.65
GPC3-203ENST00000406757 CD164Q04900 197 aa4.75□□□□□ -1.65
GPC3-203ENST00000406757 Q6Q795 121 aa4.75□□□□□ -1.65
GPC3-203ENST00000406757 PDE6GP18545 87 aa4.74□□□□□ -1.65
GPC3-203ENST00000406757 DEFB116Q30KQ4 102 aa4.74□□□□□ -1.65
GPC3-203ENST00000406757 KRTAP3-1Q9BYR8 98 aa4.73□□□□□ -1.65
GPC3-203ENST00000406757 PRR4Q16378 134 aa4.71□□□□□ -1.66
GPC3-203ENST00000406757 C1orf195Q5TG92 126 aa4.71□□□□□ -1.66
GPC3-203ENST00000406757 LIMD2Q9BT23 127 aa4.71□□□□□ -1.66
GPC3-203ENST00000406757 LINC00846Q9NV44 126 aa4.71□□□□□ -1.66
GPC3-203ENST00000406757 RPS29P62273 56 aaKnown RBP4.69□□□□□ -1.66
GPC3-203ENST00000406757 NREPQ16612 68 aa4.69□□□□□ -1.66
GPC3-203ENST00000406757 Q5XG85 94 aa4.69□□□□□ -1.66
GPC3-203ENST00000406757 Q96NJ1 140 aa4.69□□□□□ -1.66
GPC3-203ENST00000406757 SS18L2Q9UHA2 77 aa4.68□□□□□ -1.66
GPC3-203ENST00000406757 IGKV4-1P06312 121 aa4.67□□□□□ -1.66
GPC3-203ENST00000406757 Q6ZVQ6 151 aa4.67□□□□□ -1.66
GPC3-203ENST00000406757 LINC00472Q9H8W2 130 aa4.67□□□□□ -1.66
GPC3-203ENST00000406757 ASB16-AS1Q495Z4 193 aa4.66□□□□□ -1.66
GPC3-203ENST00000406757 FAT4Q6V0I7 4981 aa4.65□□□□□ -1.66
GPC3-203ENST00000406757 A0A0U1RQV1 116 aa4.65□□□□□ -1.67
GPC3-203ENST00000406757 A0A1B0GW54 56 aa4.65□□□□□ -1.67
GPC3-203ENST00000406757 SIGMAR1Q99720 223 aa4.65□□□□□ -1.67
GPC3-203ENST00000406757 UBL5Q9BZL1 73 aa4.65□□□□□ -1.67
GPC3-203ENST00000406757 IGLV7-46A0A075B6I9 117 aa4.64□□□□□ -1.67
GPC3-203ENST00000406757 IGKV3D-7A0A0C4DH55 119 aa4.63□□□□□ -1.67
GPC3-203ENST00000406757 C9orf92A6NGG3 77 aa4.63□□□□□ -1.67
GPC3-203ENST00000406757 J3QR89 54 aa4.63□□□□□ -1.67
GPC3-203ENST00000406757 BPY2O14599 106 aa4.63□□□□□ -1.67
GPC3-203ENST00000406757 ACYP1P07311 99 aa4.63□□□□□ -1.67
GPC3-203ENST00000406757 MUC17Q685J3 4493 aa4.63□□□□□ -1.67
GPC3-203ENST00000406757 FAM240AA0A1B0GVK7 77 aa4.62□□□□□ -1.67
GPC3-203ENST00000406757 DSCR10P59022 87 aa4.62□□□□□ -1.67
GPC3-203ENST00000406757 Q8N9L7 120 aa4.62□□□□□ -1.67
GPC3-203ENST00000406757 IGHV6-1A0A0B4J1U7 121 aa4.61□□□□□ -1.67
GPC3-203ENST00000406757 K7ERU9 68 aa4.61□□□□□ -1.67
GPC3-203ENST00000406757 FP248Q71RG6 208 aaPredicted RBP4.61□□□□□ -1.67
GPC3-203ENST00000406757 NOTCH2NLQ7Z3S9 236 aa4.61□□□□□ -1.67
GPC3-203ENST00000406757 J3KT08 172 aa4.6□□□□□ -1.67
GPC3-203ENST00000406757 K7EQZ3 153 aa4.59□□□□□ -1.67
GPC3-203ENST00000406757 A0A1B0GVX0 72 aa4.58□□□□□ -1.68
GPC3-203ENST00000406757 A8MWP4 228 aa4.58□□□□□ -1.68
GPC3-203ENST00000406757 KRTAP13-3Q3SY46 172 aa4.58□□□□□ -1.68
GPC3-203ENST00000406757 NDUFB1O75438 58 aa4.57□□□□□ -1.68
GPC3-203ENST00000406757 LINC00643Q86TS7 51 aa4.57□□□□□ -1.68
GPC3-203ENST00000406757 PRR15Q8IV56 129 aa4.57□□□□□ -1.68
GPC3-203ENST00000406757 LINC00313P59037 77 aa4.56□□□□□ -1.68
GPC3-203ENST00000406757 CXCL6P80162 114 aa4.55□□□□□ -1.68
GPC3-203ENST00000406757 C8orf17Q9NRJ1 99 aa4.55□□□□□ -1.68
GPC3-203ENST00000406757 MT-ATP8P03928 68 aa4.54□□□□□ -1.68
GPC3-203ENST00000406757 HIST1H4AP62805 103 aaKnown RBP4.54□□□□□ -1.68
GPC3-203ENST00000406757 WFDC13Q8IUB5 93 aa4.54□□□□□ -1.68
GPC3-203ENST00000406757 A0A087WVE0 104 aa4.53□□□□□ -1.68
GPC3-203ENST00000406757 MMP24-AS1A0A0U1RRL7 71 aa4.53□□□□□ -1.68
GPC3-203ENST00000406757 TPRXLQ17RH7 258 aa4.53□□□□□ -1.68
GPC3-203ENST00000406757 KRTAP16-1A8MUX0 517 aa4.52□□□□□ -1.69
GPC3-203ENST00000406757 C8orf87E5RJ46 101 aa4.52□□□□□ -1.69
GPC3-203ENST00000406757 ATP5EP2Q5VTU8 51 aa4.52□□□□□ -1.69
GPC3-203ENST00000406757 hDV103S1A0JD37 113 aa4.5□□□□□ -1.69
GPC3-203ENST00000406757 CASC2Q6XLA1 102 aa4.5□□□□□ -1.69
GPC3-203ENST00000406757 HCG22E2RYF7 251 aa4.49□□□□□ -1.69
GPC3-203ENST00000406757 NDUFS5O43920 106 aa4.48□□□□□ -1.69
GPC3-203ENST00000406757 MRPL34Q9BQ48 92 aaKnown RBP4.48□□□□□ -1.69
GPC3-203ENST00000406757 TMEM254Q8TBM7 123 aa4.47□□□□□ -1.69
GPC3-203ENST00000406757 A8MUU9 505 aa4.46□□□□□ -1.7
GPC3-203ENST00000406757 RPL37P61927 97 aaKnown RBP4.46□□□□□ -1.7
GPC3-203ENST00000406757 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
GPC3-203ENST00000406757 C20orf166-AS1Q96NR2 134 aa4.46□□□□□ -1.7
GPC3-203ENST00000406757 PCOTHQ58A44 107 aa4.45□□□□□ -1.7
GPC3-203ENST00000406757 Q75L30 129 aa4.45□□□□□ -1.7
GPC3-203ENST00000406757 Q8N9P0 234 aaPredicted RBP4.44□□□□□ -1.7
GPC3-203ENST00000406757 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
GPC3-203ENST00000406757 KRTAP4-1Q9BYQ7 146 aa4.43□□□□□ -1.7
GPC3-203ENST00000406757 ATP11AUNQ6ZP68 121 aa4.42□□□□□ -1.7
GPC3-203ENST00000406757 Q5W150 140 aa4.41□□□□□ -1.7
GPC3-203ENST00000406757 IMUPQ9GZP8 106 aa4.41□□□□□ -1.7
GPC3-203ENST00000406757 FAM236AA0A1B0GUQ0 79 aa4.4□□□□□ -1.71
GPC3-203ENST00000406757 FAM236BA0A1B0GV22 79 aa4.4□□□□□ -1.71
GPC3-203ENST00000406757 SEC61BP60468 96 aaKnown RBP4.4□□□□□ -1.71
GPC3-203ENST00000406757 ZCCHC13Q8WW36 166 aaKnown RBP4.4□□□□□ -1.71
GPC3-203ENST00000406757 SCGB1A1P11684 91 aa4.39□□□□□ -1.71
GPC3-203ENST00000406757 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
GPC3-203ENST00000406757 OCR1Q9BZK8 76 aa4.35□□□□□ -1.71
GPC3-203ENST00000406757 TP53AIP1Q9HCN2 124 aa4.35□□□□□ -1.71
GPC3-203ENST00000406757 UQCRQO14949 82 aa4.34□□□□□ -1.71
GPC3-203ENST00000406757 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
GPC3-203ENST00000406757 IGKV2-30P06310 120 aa4.33□□□□□ -1.72
GPC3-203ENST00000406757 H0Y9P7 68 aa4.32□□□□□ -1.72
GPC3-203ENST00000406757 SPINK7P58062 85 aa4.32□□□□□ -1.72
GPC3-203ENST00000406757 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
GPC3-203ENST00000406757 ATOX1O00244 68 aa4.3□□□□□ -1.72
GPC3-203ENST00000406757 MT1HP80294 61 aa4.3□□□□□ -1.72
GPC3-203ENST00000406757 KRTAP19-2Q3LHN2 52 aa4.3□□□□□ -1.72
GPC3-203ENST00000406757 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms