RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 C1orf64Q8NEQ6 169 aa5.33□□□□□ -1.56
LINC01139-201ENST00000400946 PLAC8Q9NZF1 115 aa5.33□□□□□ -1.56
LINC01139-201ENST00000400946 KMT2CQ8NEZ4 4911 aaKnown RBP5.32□□□□□ -1.56
LINC01139-201ENST00000400946 H0Y9P7 68 aa5.32□□□□□ -1.56
LINC01139-201ENST00000400946 Q75L30 129 aa5.32□□□□□ -1.56
LINC01139-201ENST00000400946 MMP24-AS1A0A0U1RRL7 71 aa5.31□□□□□ -1.56
LINC01139-201ENST00000400946 DEFB116Q30KQ4 102 aa5.31□□□□□ -1.56
LINC01139-201ENST00000400946 LINC00208Q96KT6 92 aa5.31□□□□□ -1.56
LINC01139-201ENST00000400946 CSMD3Q7Z407 3707 aa5.3□□□□□ -1.56
LINC01139-201ENST00000400946 IGLV5-52A0A0A0MRZ9 124 aa5.3□□□□□ -1.56
LINC01139-201ENST00000400946 FAM229BQ4G0N7 80 aa5.3□□□□□ -1.56
LINC01139-201ENST00000400946 Q6ZR54 194 aa5.3□□□□□ -1.56
LINC01139-201ENST00000400946 C8orf87E5RJ46 101 aa5.29□□□□□ -1.56
LINC01139-201ENST00000400946 PANO1I0J062 215 aa5.29□□□□□ -1.56
LINC01139-201ENST00000400946 ZNF861PO60384 105 aa5.29□□□□□ -1.56
LINC01139-201ENST00000400946 Q96NJ1 140 aa5.29□□□□□ -1.56
LINC01139-201ENST00000400946 STARD9Q9P2P6 4700 aa5.29□□□□□ -1.56
LINC01139-201ENST00000400946 RTL8CO15255 209 aa5.28□□□□□ -1.56
LINC01139-201ENST00000400946 C8orf17Q9NRJ1 99 aa5.27□□□□□ -1.57
LINC01139-201ENST00000400946 A0A1B0GVX0 72 aa5.26□□□□□ -1.57
LINC01139-201ENST00000400946 CDK2AP2O75956 126 aa5.26□□□□□ -1.57
LINC01139-201ENST00000400946 MPLKIPQ8TAP9 179 aa5.26□□□□□ -1.57
LINC01139-201ENST00000400946 RBM12B-AS1Q9P1G2 102 aa5.26□□□□□ -1.57
LINC01139-201ENST00000400946 PSORS1C2Q9UIG4 136 aa5.26□□□□□ -1.57
LINC01139-201ENST00000400946 RYR3Q15413 4870 aa5.26□□□□□ -1.57
LINC01139-201ENST00000400946 IGLV7-46A0A075B6I9 117 aa5.25□□□□□ -1.57
LINC01139-201ENST00000400946 DYNC2H1Q8NCM8 4307 aaKnown RBP5.24□□□□□ -1.57
LINC01139-201ENST00000400946 IGLV9-49A0A0B4J1Y8 123 aa5.24□□□□□ -1.57
LINC01139-201ENST00000400946 LYSTQ99698 3801 aa5.24□□□□□ -1.57
LINC01139-201ENST00000400946 SSBP3-AS1Q7Z2R9 100 aa5.23□□□□□ -1.57
LINC01139-201ENST00000400946 LIMD2Q9BT23 127 aa5.23□□□□□ -1.57
LINC01139-201ENST00000400946 SACSQ9NZJ4 4579 aa5.23□□□□□ -1.57
LINC01139-201ENST00000400946 C1orf134Q5TEV5 83 aa5.23□□□□□ -1.57
LINC01139-201ENST00000400946 MRPL34Q9BQ48 92 aaKnown RBP5.23□□□□□ -1.57
LINC01139-201ENST00000400946 TENM2Q9NT68 2774 aa5.22□□□□□ -1.57
LINC01139-201ENST00000400946 IGLV7-43P04211 117 aa5.22□□□□□ -1.57
LINC01139-201ENST00000400946 PLECQ15149 4684 aaKnown RBP5.22□□□□□ -1.57
LINC01139-201ENST00000400946 BRK1Q8WUW1 75 aa5.21□□□□□ -1.58
LINC01139-201ENST00000400946 RYR2Q92736 4967 aa5.2□□□□□ -1.58
LINC01139-201ENST00000400946 LOC101927531A0A1B0GV80 90 aa5.18□□□□□ -1.58
LINC01139-201ENST00000400946 PRR4Q16378 134 aa5.18□□□□□ -1.58
LINC01139-201ENST00000400946 IGHV6-1A0A0B4J1U7 121 aa5.17□□□□□ -1.58
LINC01139-201ENST00000400946 LY6G6CO95867 125 aa5.17□□□□□ -1.58
LINC01139-201ENST00000400946 Q8N9P0 234 aaPredicted RBP5.17□□□□□ -1.58
LINC01139-201ENST00000400946 HYDINQ4G0P3 5121 aa5.17□□□□□ -1.58
LINC01139-201ENST00000400946 ALMS1Q8TCU4 4167 aa5.16□□□□□ -1.58
LINC01139-201ENST00000400946 COA5Q86WW8 74 aa5.15□□□□□ -1.58
LINC01139-201ENST00000400946 NDUFS5O43920 106 aa5.14□□□□□ -1.59
LINC01139-201ENST00000400946 KRTAP13-3Q3SY46 172 aa5.13□□□□□ -1.59
LINC01139-201ENST00000400946 KMT2AQ03164 3969 aa5.12□□□□□ -1.59
LINC01139-201ENST00000400946 A8MUN3 132 aa5.12□□□□□ -1.59
LINC01139-201ENST00000400946 PSPHP1O15172 72 aa5.12□□□□□ -1.59
LINC01139-201ENST00000400946 Q5VV11 94 aa5.12□□□□□ -1.59
LINC01139-201ENST00000400946 Q6ZSA8 131 aa5.12□□□□□ -1.59
LINC01139-201ENST00000400946 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
LINC01139-201ENST00000400946 LINC01558Q9Y6Z2 57 aa5.11□□□□□ -1.59
LINC01139-201ENST00000400946 VPS13DQ5THJ4 4388 aa5.1□□□□□ -1.59
LINC01139-201ENST00000400946 CIRBP-AS1Q8TBR5 109 aa5.1□□□□□ -1.59
LINC01139-201ENST00000400946 PCOTHQ58A44 107 aa5.09□□□□□ -1.59
LINC01139-201ENST00000400946 ANAPC11Q9NYG5 84 aa5.09□□□□□ -1.59
LINC01139-201ENST00000400946 A0A087X002 238 aa5.07□□□□□ -1.6
LINC01139-201ENST00000400946 LINC00313P59037 77 aa5.07□□□□□ -1.6
LINC01139-201ENST00000400946 NOTCH2NLQ7Z3S9 236 aa5.07□□□□□ -1.6
LINC01139-201ENST00000400946 PRR15LQ9BU68 103 aa5.07□□□□□ -1.6
LINC01139-201ENST00000400946 DNAH10Q8IVF4 4471 aa5.07□□□□□ -1.6
LINC01139-201ENST00000400946 EPPK1P58107 5090 aaKnown RBP5.07□□□□□ -1.6
LINC01139-201ENST00000400946 CHKB-CPT1BH3BT56 60 aa5.07□□□□□ -1.6
LINC01139-201ENST00000400946 HRES1P13985 223 aa5.07□□□□□ -1.6
LINC01139-201ENST00000400946 ACYP2P14621 99 aa5.07□□□□□ -1.6
LINC01139-201ENST00000400946 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
LINC01139-201ENST00000400946 SPINK6Q6UWN8 80 aa5.06□□□□□ -1.6
LINC01139-201ENST00000400946 DNAH6Q9C0G6 4158 aa5.06□□□□□ -1.6
LINC01139-201ENST00000400946 Q5W150 140 aa5.05□□□□□ -1.6
LINC01139-201ENST00000400946 FRAS1Q86XX4 4008 aa5.04□□□□□ -1.6
LINC01139-201ENST00000400946 KRTAP10-2P60368 255 aa5.03□□□□□ -1.6
LINC01139-201ENST00000400946 ATP11AUNQ6ZP68 121 aa5.03□□□□□ -1.6
LINC01139-201ENST00000400946 DMAC1Q96GE9 116 aa5.03□□□□□ -1.6
LINC01139-201ENST00000400946 RPS29P62273 56 aaKnown RBP5.02□□□□□ -1.61
LINC01139-201ENST00000400946 KRTAP13-2Q52LG2 175 aa5.02□□□□□ -1.61
LINC01139-201ENST00000400946 SPINK1P00995 79 aa5.02□□□□□ -1.61
LINC01139-201ENST00000400946 IGKV2-30P06310 120 aa5.02□□□□□ -1.61
LINC01139-201ENST00000400946 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
LINC01139-201ENST00000400946 DNAH2Q9P225 4427 aa5.02□□□□□ -1.61
LINC01139-201ENST00000400946 BIRC6Q9NR09 4857 aa5.01□□□□□ -1.61
LINC01139-201ENST00000400946 KRTAP1-4P0C5Y4 121 aa5.01□□□□□ -1.61
LINC01139-201ENST00000400946 DNAH17Q9UFH2 4485 aa5□□□□□ -1.61
LINC01139-201ENST00000400946 A6NED7 52 aa5□□□□□ -1.61
LINC01139-201ENST00000400946 KRTAP16-1A8MUX0 517 aa5□□□□□ -1.61
LINC01139-201ENST00000400946 KRTAP10-1P60331 282 aa5□□□□□ -1.61
LINC01139-201ENST00000400946 SPAG11AQ6PDA7 123 aa4.99□□□□□ -1.61
LINC01139-201ENST00000400946 LCA10Q71F78 164 aa4.99□□□□□ -1.61
LINC01139-201ENST00000400946 FAT2Q9NYQ8 4349 aa4.99□□□□□ -1.61
LINC01139-201ENST00000400946 A0A1B0GVY2 172 aa4.98□□□□□ -1.61
LINC01139-201ENST00000400946 SRRM2Q9UQ35 2752 aaKnown RBP4.98□□□□□ -1.61
LINC01139-201ENST00000400946 HECTD4Q9Y4D8 3996 aa4.96□□□□□ -1.62
LINC01139-201ENST00000400946 TYMSOSQ8TAI1 123 aa4.95□□□□□ -1.62
LINC01139-201ENST00000400946 PKD1P98161 4303 aa4.94□□□□□ -1.62
LINC01139-201ENST00000400946 DNAH8Q96JB1 4490 aa4.93□□□□□ -1.62
LINC01139-201ENST00000400946 IGKV2D-30A0A075B6S6 120 aa4.9□□□□□ -1.63
LINC01139-201ENST00000400946 DNAH11Q96DT5 4516 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms