RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 SPANXA2-OT1Q8N9U9 137 aa7.51□□□□□ -1.21
PPP4R1-202ENST00000400555 Q5VV11 94 aa7.51□□□□□ -1.21
PPP4R1-202ENST00000400555 LIMD2Q9BT23 127 aa7.51□□□□□ -1.21
PPP4R1-202ENST00000400555 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
PPP4R1-202ENST00000400555 Q5W150 140 aa7.49□□□□□ -1.21
PPP4R1-202ENST00000400555 IGLV7-46A0A075B6I9 117 aa7.49□□□□□ -1.21
PPP4R1-202ENST00000400555 IGKV2D-30A0A075B6S6 120 aa7.49□□□□□ -1.21
PPP4R1-202ENST00000400555 IGKV2-30P06310 120 aa7.49□□□□□ -1.21
PPP4R1-202ENST00000400555 DNAH3Q8TD57 4116 aa7.48□□□□□ -1.21
PPP4R1-202ENST00000400555 C4orf48Q5BLP8 95 aa7.47□□□□□ -1.21
PPP4R1-202ENST00000400555 LINC00483Q53H64 154 aa7.46□□□□□ -1.21
PPP4R1-202ENST00000400555 LINC00313P59037 77 aa7.46□□□□□ -1.22
PPP4R1-202ENST00000400555 Q6ZR54 194 aa7.45□□□□□ -1.22
PPP4R1-202ENST00000400555 DNAH1Q9P2D7 4330 aa7.45□□□□□ -1.22
PPP4R1-202ENST00000400555 HRES1P13985 223 aa7.45□□□□□ -1.22
PPP4R1-202ENST00000400555 SPINK1P00995 79 aa7.43□□□□□ -1.22
PPP4R1-202ENST00000400555 STARD9Q9P2P6 4700 aa7.42□□□□□ -1.22
PPP4R1-202ENST00000400555 KMT2AQ03164 3969 aa7.4□□□□□ -1.23
PPP4R1-202ENST00000400555 LOC101927531A0A1B0GV80 90 aa7.39□□□□□ -1.23
PPP4R1-202ENST00000400555 SMR3BP02814 79 aaPredicted RBP7.39□□□□□ -1.23
PPP4R1-202ENST00000400555 PLA2G1BP04054 148 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-202ENST00000400555 PRKDCP78527 4128 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-202ENST00000400555 KRTAP10-1P60331 282 aa7.39□□□□□ -1.23
PPP4R1-202ENST00000400555 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
PPP4R1-202ENST00000400555 FRAS1Q86XX4 4008 aa7.37□□□□□ -1.23
PPP4R1-202ENST00000400555 SPINK7P58062 85 aa7.37□□□□□ -1.23
PPP4R1-202ENST00000400555 LCA10Q71F78 164 aa7.36□□□□□ -1.23
PPP4R1-202ENST00000400555 ACYP2P14621 99 aa7.35□□□□□ -1.23
PPP4R1-202ENST00000400555 TYMSOSQ8TAI1 123 aa7.34□□□□□ -1.23
PPP4R1-202ENST00000400555 KRTAP13-2Q52LG2 175 aa7.32□□□□□ -1.24
PPP4R1-202ENST00000400555 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
PPP4R1-202ENST00000400555 SEC61GP60059 68 aa7.3□□□□□ -1.24
PPP4R1-202ENST00000400555 ASB16-AS1Q495Z4 193 aa7.3□□□□□ -1.24
PPP4R1-202ENST00000400555 C7orf65Q6ZTY9 151 aa7.3□□□□□ -1.24
PPP4R1-202ENST00000400555 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
PPP4R1-202ENST00000400555 Q75L30 129 aa7.3□□□□□ -1.24
PPP4R1-202ENST00000400555 Q8N1X5 172 aa7.28□□□□□ -1.24
PPP4R1-202ENST00000400555 DNAH11Q96DT5 4516 aa7.28□□□□□ -1.24
PPP4R1-202ENST00000400555 A0A1B0GU69 56 aa7.28□□□□□ -1.24
PPP4R1-202ENST00000400555 C9orf92A6NGG3 77 aa7.28□□□□□ -1.24
PPP4R1-202ENST00000400555 DNAH8Q96JB1 4490 aa7.28□□□□□ -1.24
PPP4R1-202ENST00000400555 LINC01558Q9Y6Z2 57 aa7.27□□□□□ -1.24
PPP4R1-202ENST00000400555 DNHD1Q96M86 4753 aa7.27□□□□□ -1.25
PPP4R1-202ENST00000400555 DMBT1Q9UGM3 2413 aaPredicted RBP7.27□□□□□ -1.25
PPP4R1-202ENST00000400555 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
PPP4R1-202ENST00000400555 CDC42SE1Q9NRR8 79 aa7.24□□□□□ -1.25
PPP4R1-202ENST00000400555 VPS13DQ5THJ4 4388 aa7.23□□□□□ -1.25
PPP4R1-202ENST00000400555 DNAH17Q9UFH2 4485 aa7.23□□□□□ -1.25
PPP4R1-202ENST00000400555 DNAH2Q9P225 4427 aa7.22□□□□□ -1.25
PPP4R1-202ENST00000400555 FLG2Q5D862 2391 aaPredicted RBP7.21□□□□□ -1.26
PPP4R1-202ENST00000400555 DNAH6Q9C0G6 4158 aa7.2□□□□□ -1.26
PPP4R1-202ENST00000400555 HECTD4Q9Y4D8 3996 aa7.2□□□□□ -1.26
PPP4R1-202ENST00000400555 LINC00304Q8N9R0 145 aa7.17□□□□□ -1.26
PPP4R1-202ENST00000400555 KTN1-AS1Q86SY8 53 aa7.16□□□□□ -1.26
PPP4R1-202ENST00000400555 DMAC1Q96GE9 116 aa7.15□□□□□ -1.27
PPP4R1-202ENST00000400555 LRP1BQ9NZR2 4599 aa7.15□□□□□ -1.27
PPP4R1-202ENST00000400555 PRAC1Q96KF2 57 aa7.14□□□□□ -1.27
PPP4R1-202ENST00000400555 KRTAP1-4P0C5Y4 121 aa7.14□□□□□ -1.27
PPP4R1-202ENST00000400555 KRTAP13-3Q3SY46 172 aa7.14□□□□□ -1.27
PPP4R1-202ENST00000400555 MIR22HGQ0VDD5 57 aa7.1□□□□□ -1.27
PPP4R1-202ENST00000400555 RBM12B-AS1Q9P1G2 102 aa7.09□□□□□ -1.27
PPP4R1-202ENST00000400555 DYNC2H1Q8NCM8 4307 aaKnown RBP7.09□□□□□ -1.28
PPP4R1-202ENST00000400555 A6NN06 94 aa7.07□□□□□ -1.28
PPP4R1-202ENST00000400555 UQCR11O14957 56 aa7.07□□□□□ -1.28
PPP4R1-202ENST00000400555 Q6ZSA8 131 aa7.07□□□□□ -1.28
PPP4R1-202ENST00000400555 ADM2Q7Z4H4 148 aa7.07□□□□□ -1.28
PPP4R1-202ENST00000400555 KRTAP16-1A8MUX0 517 aa7.06□□□□□ -1.28
PPP4R1-202ENST00000400555 DNAH5Q8TE73 4624 aa7.01□□□□□ -1.29
PPP4R1-202ENST00000400555 HYDINQ4G0P3 5121 aa7□□□□□ -1.29
PPP4R1-202ENST00000400555 VPS13BQ7Z7G8 4022 aa6.97□□□□□ -1.29
PPP4R1-202ENST00000400555 FAT1Q14517 4588 aa6.96□□□□□ -1.29
PPP4R1-202ENST00000400555 ALMS1Q8TCU4 4167 aa6.95□□□□□ -1.3
PPP4R1-202ENST00000400555 PKHD1P08F94 4074 aa6.91□□□□□ -1.3
PPP4R1-202ENST00000400555 SPATA8Q6RVD6 105 aa6.9□□□□□ -1.3
PPP4R1-202ENST00000400555 CRIPTQ9P021 101 aa6.87□□□□□ -1.31
PPP4R1-202ENST00000400555 CSAG1Q6PB30 78 aa6.85□□□□□ -1.31
PPP4R1-202ENST00000400555 FAT2Q9NYQ8 4349 aa6.85□□□□□ -1.31
PPP4R1-202ENST00000400555 A0A1B0GU33 70 aa6.83□□□□□ -1.32
PPP4R1-202ENST00000400555 A0A0D9SG42 100 aa6.81□□□□□ -1.32
PPP4R1-202ENST00000400555 DYNC1H1Q14204 4646 aaKnown RBP6.79□□□□□ -1.32
PPP4R1-202ENST00000400555 PKD1P98161 4303 aa6.77□□□□□ -1.33
PPP4R1-202ENST00000400555 A8MUU9 505 aa6.76□□□□□ -1.33
PPP4R1-202ENST00000400555 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
PPP4R1-202ENST00000400555 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
PPP4R1-202ENST00000400555 K7ERS5 55 aa6.74□□□□□ -1.33
PPP4R1-202ENST00000400555 MYCBP2O75592 4640 aa6.74□□□□□ -1.33
PPP4R1-202ENST00000400555 H0YAA0 97 aa6.74□□□□□ -1.33
PPP4R1-202ENST00000400555 LINC01554Q52M75 96 aa6.72□□□□□ -1.33
PPP4R1-202ENST00000400555 Q5VSD8 79 aa6.72□□□□□ -1.33
PPP4R1-202ENST00000400555 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.34
PPP4R1-202ENST00000400555 RPS29P62273 56 aaKnown RBP6.71□□□□□ -1.34
PPP4R1-202ENST00000400555 COX6B2Q6YFQ2 88 aa6.71□□□□□ -1.34
PPP4R1-202ENST00000400555 LRP1Q07954 4544 aaKnown RBP6.68□□□□□ -1.34
PPP4R1-202ENST00000400555 A0A1B0GVY2 172 aa6.67□□□□□ -1.34
PPP4R1-202ENST00000400555 SACSQ9NZJ4 4579 aa6.67□□□□□ -1.34
PPP4R1-202ENST00000400555 KRTAP10-4P60372 401 aaPredicted RBP6.62□□□□□ -1.35
PPP4R1-202ENST00000400555 APOBP04114 4563 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-202ENST00000400555 S4R3F8 94 aa6.57□□□□□ -1.36
PPP4R1-202ENST00000400555 KMT2CQ8NEZ4 4911 aaKnown RBP6.57□□□□□ -1.36
PPP4R1-202ENST00000400555 KRTAP10-8P60410 259 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms